RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 ARAP1Q96P48 1450 aa21.52■■□□□ 1.04
CACTIN-203ENST00000429344 TOPBP1Q92547 1522 aa21.52■■□□□ 1.04
CACTIN-203ENST00000429344 POLA1P09884 1462 aaPredicted RBP21.5■■□□□ 1.03
CACTIN-203ENST00000429344 SUPT16HQ9Y5B9 1047 aaKnown RBP21.5■■□□□ 1.03
CACTIN-203ENST00000429344 KCNH8Q96L42 1107 aa21.45■■□□□ 1.02
CACTIN-203ENST00000429344 ARHGAP35Q9NRY4 1499 aa21.43■■□□□ 1.02
CACTIN-203ENST00000429344 FHOD3Q2V2M9 1422 aa21.42■■□□□ 1.02
CACTIN-203ENST00000429344 DNMBPQ6XZF7 1577 aa21.41■■□□□ 1.02
CACTIN-203ENST00000429344 HIRIP3Q9BW71 556 aaPredicted RBP21.41■■□□□ 1.02
CACTIN-203ENST00000429344 ERCC6Q03468 1493 aa21.37■■□□□ 1.01
CACTIN-203ENST00000429344 URB2Q14146 1524 aaKnown RBP21.36■■□□□ 1.01
CACTIN-203ENST00000429344 DDX10Q13206 875 aaKnown RBP21.35■■□□□ 1.01
CACTIN-203ENST00000429344 LAMC3Q9Y6N6 1575 aa21.35■■□□□ 1.01
CACTIN-203ENST00000429344 GAPVD1Q14C86 1478 aa21.34■■□□□ 1.01
CACTIN-203ENST00000429344 DHX57Q6P158 1386 aaKnown RBP21.34■■□□□ 1.01
CACTIN-203ENST00000429344 FHAD1B1AJZ9 1412 aa21.33■■□□□ 1.01
CACTIN-203ENST00000429344 CCNB3Q8WWL7 1395 aa21.33■■□□□ 1.01
CACTIN-203ENST00000429344 ABCA10Q8WWZ4 1543 aa21.31■■□□□ 1
CACTIN-203ENST00000429344 MTUS2Q5JR59 1369 aa21.31■■□□□ 1
CACTIN-203ENST00000429344 FKBP8Q14318 412 aa21.3■■□□□ 1
CACTIN-203ENST00000429344 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 11e-6■■■■□ 26.1
CACTIN-203ENST00000429344 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
CACTIN-203ENST00000429344 PRDM2Q13029 1718 aa21.27■□□□□ 0.99
CACTIN-203ENST00000429344 TSHZ2Q9NRE2 1034 aa21.25■□□□□ 0.99
CACTIN-203ENST00000429344 TRIM52Q96A61 297 aa21.25■□□□□ 0.99
CACTIN-203ENST00000429344 SIN3AQ96ST3 1273 aa21.24■□□□□ 0.99
CACTIN-203ENST00000429344 NEFLP07196 543 aa21.22■□□□□ 0.99
CACTIN-203ENST00000429344 CHIC2Q9UKJ5 165 aa21.16■□□□□ 0.98
CACTIN-203ENST00000429344 FMN1Q68DA7 1419 aa21.15■□□□□ 0.98
CACTIN-203ENST00000429344 CLSPNQ9HAW4 1339 aa21.13■□□□□ 0.97
CACTIN-203ENST00000429344 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
CACTIN-203ENST00000429344 PHLDB1Q86UU1 1377 aa21.12■□□□□ 0.97
CACTIN-203ENST00000429344 LRRC9Q6ZRR7 1453 aa21.09■□□□□ 0.97
CACTIN-203ENST00000429344 KIF21AQ7Z4S6 1674 aa21.09■□□□□ 0.97
CACTIN-203ENST00000429344 RAB3GAP2Q9H2M9 1393 aa21.07■□□□□ 0.96
CACTIN-203ENST00000429344 ANP32EQ9BTT0 268 aa21.06■□□□□ 0.96
CACTIN-203ENST00000429344 IRX6P78412 446 aaPredicted RBP21.04■□□□□ 0.96
CACTIN-203ENST00000429344 RRBP1Q9P2E9 1410 aaKnown RBP21.04■□□□□ 0.96
CACTIN-203ENST00000429344 ZNF777Q9ULD5 760 aaPredicted RBP21.04■□□□□ 0.96
CACTIN-203ENST00000429344 RRP7BPQ9NSQ0 103 aa21.04■□□□□ 0.96
CACTIN-203ENST00000429344 TIAM1Q13009 1591 aa21.04■□□□□ 0.96
CACTIN-203ENST00000429344 ZNF608Q9ULD9 1512 aaPredicted RBP21.02■□□□□ 0.96
CACTIN-203ENST00000429344 CUL7Q14999 1698 aa21.02■□□□□ 0.96
CACTIN-203ENST00000429344 ANP32CO43423 234 aa21.02■□□□□ 0.96
CACTIN-203ENST00000429344 PCF11O94913 1555 aaKnown RBP21.01■□□□□ 0.95
CACTIN-203ENST00000429344 CASKIN1Q8WXD9 1431 aa21.01■□□□□ 0.95
CACTIN-203ENST00000429344 GRIN2BQ13224 1484 aa21.01■□□□□ 0.95
CACTIN-203ENST00000429344 CDK11AQ9UQ88 783 aaPredicted RBP21■□□□□ 0.95
CACTIN-203ENST00000429344 CNGB1Q14028 1251 aaPredicted RBP21■□□□□ 0.95
CACTIN-203ENST00000429344 BCL11AQ9H165 835 aa20.99■□□□□ 0.95
CACTIN-203ENST00000429344 SETD5Q9C0A6 1442 aa20.98■□□□□ 0.95
CACTIN-203ENST00000429344 EFCAB5A4FU69 1503 aa20.97■□□□□ 0.95
CACTIN-203ENST00000429344 FYCO1Q9BQS8 1478 aa20.96■□□□□ 0.95
CACTIN-203ENST00000429344 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
CACTIN-203ENST00000429344 SNAPC4Q5SXM2 1469 aa20.9■□□□□ 0.94
CACTIN-203ENST00000429344 RBM19Q9Y4C8 960 aaKnown RBP20.88■□□□□ 0.93
CACTIN-203ENST00000429344 ERICH6Q7L0X2 663 aa20.88■□□□□ 0.93
CACTIN-203ENST00000429344 HNRNPUQ00839 825 aaKnown RBP eCLIP20.87■□□□□ 0.93
CACTIN-203ENST00000429344 JPH4Q96JJ6 628 aa20.87■□□□□ 0.93
CACTIN-203ENST00000429344 ABCA5Q8WWZ7 1642 aa20.87■□□□□ 0.93
CACTIN-203ENST00000429344 FGD6Q6ZV73 1430 aa20.85■□□□□ 0.93
CACTIN-203ENST00000429344 TONSLQ96HA7 1378 aa20.82■□□□□ 0.92
CACTIN-203ENST00000429344 MAP3K1Q13233 1512 aa20.82■□□□□ 0.92
CACTIN-203ENST00000429344 NCOA2Q15596 1464 aa20.81■□□□□ 0.92
CACTIN-203ENST00000429344 CTTNBP2Q8WZ74 1663 aa20.81■□□□□ 0.92
CACTIN-203ENST00000429344 TARBP1Q13395 1621 aaKnown RBP20.81■□□□□ 0.92
CACTIN-203ENST00000429344 CFDP1Q9UEE9 299 aaPredicted RBP20.8■□□□□ 0.92
CACTIN-203ENST00000429344 IQGAP2Q13576 1575 aa20.8■□□□□ 0.92
CACTIN-203ENST00000429344 PLEKHD1A6NEE1 506 aa20.78■□□□□ 0.92
CACTIN-203ENST00000429344 MYOM3Q5VTT5 1437 aa20.76■□□□□ 0.91
CACTIN-203ENST00000429344 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
CACTIN-203ENST00000429344 SENP3-EIF4A1A0A087X0R7 540 aa20.75■□□□□ 0.91
CACTIN-203ENST00000429344 PPP1R15AO75807 674 aaPredicted RBP20.75■□□□□ 0.91
CACTIN-203ENST00000429344 CARMIL2Q6F5E8 1435 aa20.75■□□□□ 0.91
CACTIN-203ENST00000429344 CDK13Q14004 1512 aaKnown RBP20.75■□□□□ 0.91
CACTIN-203ENST00000429344 POLR3GLQ9BT43 218 aa20.73■□□□□ 0.91
CACTIN-203ENST00000429344 ZNF644Q9H582 1327 aaPredicted RBP20.73■□□□□ 0.91
CACTIN-203ENST00000429344 KIAA0586Q9BVV6 1533 aa20.72■□□□□ 0.91
CACTIN-203ENST00000429344 GRIN2AQ12879 1464 aa20.72■□□□□ 0.91
CACTIN-203ENST00000429344 ADAMTS12P58397 1594 aa20.71■□□□□ 0.91
CACTIN-203ENST00000429344 FOXD1Q16676 465 aa20.71■□□□□ 0.91
CACTIN-203ENST00000429344 FAM9BQ8IZU0 186 aa20.69■□□□□ 0.9
CACTIN-203ENST00000429344 WDR62O43379 1518 aa20.69■□□□□ 0.9
CACTIN-203ENST00000429344 CCDC18Q5T9S5 1454 aa20.69■□□□□ 0.9
CACTIN-203ENST00000429344 MAPKBP1O60336 1514 aa20.68■□□□□ 0.9
CACTIN-203ENST00000429344 EPRSP07814 1512 aaKnown RBP20.68■□□□□ 0.9
CACTIN-203ENST00000429344 ZNF326Q5BKZ1 582 aaKnown RBP20.68■□□□□ 0.9
CACTIN-203ENST00000429344 PBRM1Q86U86 1689 aa20.68■□□□□ 0.9
CACTIN-203ENST00000429344 SLC4A1APQ9BWU0 796 aaKnown RBP20.66■□□□□ 0.9
CACTIN-203ENST00000429344 CFAP43Q8NDM7 1665 aa20.65■□□□□ 0.9
CACTIN-203ENST00000429344 EHBP1L1Q8N3D4 1523 aa20.64■□□□□ 0.89
CACTIN-203ENST00000429344 EIF4G3O43432 1585 aaKnown RBP20.64■□□□□ 0.89
CACTIN-203ENST00000429344 MYT1LQ9UL68 1186 aa20.64■□□□□ 0.89
CACTIN-203ENST00000429344 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
CACTIN-203ENST00000429344 CCER2I3L3R5 266 aa20.62■□□□□ 0.89
CACTIN-203ENST00000429344 SAMD9Q5K651 1589 aa20.62■□□□□ 0.89
CACTIN-203ENST00000429344 HECW1Q76N89 1606 aa20.61■□□□□ 0.89
CACTIN-203ENST00000429344 TSPY4P0CV99 314 aa20.61■□□□□ 0.89
CACTIN-203ENST00000429344 TSPY10P0CW01 314 aa20.61■□□□□ 0.89
CACTIN-203ENST00000429344 MAGI1Q96QZ7 1491 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms