RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 CC2D2AQ9P2K1 1620 aa24.87■■□□□ 1.57
RARA-206ENST00000425707 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
RARA-206ENST00000425707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.81■■□□□ 1.56
RARA-206ENST00000425707 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
RARA-206ENST00000425707 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
RARA-206ENST00000425707 PHLDB1Q86UU1 1377 aa24.74■■□□□ 1.55
RARA-206ENST00000425707 TSHZ2Q9NRE2 1034 aa24.72■■□□□ 1.55
RARA-206ENST00000425707 EFCAB5A4FU69 1503 aa24.72■■□□□ 1.55
RARA-206ENST00000425707 AQRO60306 1485 aaKnown RBP eCLIP24.72■■□□□ 1.554e-7■■■■□ 24.2
RARA-206ENST00000425707 PCF11O94913 1555 aaKnown RBP24.72■■□□□ 1.55
RARA-206ENST00000425707 FGD5Q6ZNL6 1462 aa24.71■■□□□ 1.55
RARA-206ENST00000425707 FYCO1Q9BQS8 1478 aa24.7■■□□□ 1.54
RARA-206ENST00000425707 CADPSQ9ULU8 1353 aa24.69■■□□□ 1.54
RARA-206ENST00000425707 ITGAEP38570 1179 aa24.67■■□□□ 1.54
RARA-206ENST00000425707 CCER2I3L3R5 266 aa24.64■■□□□ 1.54
RARA-206ENST00000425707 PPP1R15AO75807 674 aaPredicted RBP24.64■■□□□ 1.54
RARA-206ENST00000425707 CASKIN1Q8WXD9 1431 aa24.62■■□□□ 1.53
RARA-206ENST00000425707 CUL7Q14999 1698 aa24.59■■□□□ 1.53
RARA-206ENST00000425707 KCNH8Q96L42 1107 aa24.56■■□□□ 1.52
RARA-206ENST00000425707 CTTNBP2Q8WZ74 1663 aa24.56■■□□□ 1.52
RARA-206ENST00000425707 ABCA10Q8WWZ4 1543 aa24.54■■□□□ 1.52
RARA-206ENST00000425707 DNMBPQ6XZF7 1577 aa24.52■■□□□ 1.52
RARA-206ENST00000425707 DDX10Q13206 875 aaKnown RBP24.52■■□□□ 1.52
RARA-206ENST00000425707 ANP32EQ9BTT0 268 aa24.52■■□□□ 1.52
RARA-206ENST00000425707 SIN3AQ96ST3 1273 aa24.52■■□□□ 1.52
RARA-206ENST00000425707 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
RARA-206ENST00000425707 FMN1Q68DA7 1419 aa24.48■■□□□ 1.51
RARA-206ENST00000425707 FGD6Q6ZV73 1430 aa24.47■■□□□ 1.51
RARA-206ENST00000425707 HFM1A2PYH4 1435 aa24.46■■□□□ 1.51
RARA-206ENST00000425707 FHOD3Q2V2M9 1422 aa24.45■■□□□ 1.5
RARA-206ENST00000425707 UACAQ9BZF9 1416 aa24.45■■□□□ 1.5
RARA-206ENST00000425707 ANP32CO43423 234 aa24.44■■□□□ 1.5
RARA-206ENST00000425707 THOC2Q8NI27 1593 aaKnown RBP24.43■■□□□ 1.5
RARA-206ENST00000425707 FANCD2Q9BXW9 1451 aa24.43■■□□□ 1.5
RARA-206ENST00000425707 SNAPC4Q5SXM2 1469 aa24.43■■□□□ 1.5
RARA-206ENST00000425707 CCDC18Q5T9S5 1454 aa24.42■■□□□ 1.5
RARA-206ENST00000425707 FKBP8Q14318 412 aa24.42■■□□□ 1.5
RARA-206ENST00000425707 PTPN23Q9H3S7 1636 aa24.42■■□□□ 1.5
RARA-206ENST00000425707 NEFLP07196 543 aa24.41■■□□□ 1.5
RARA-206ENST00000425707 SAMD9Q5K651 1589 aa24.39■■□□□ 1.49
RARA-206ENST00000425707 TONSLQ96HA7 1378 aa24.37■■□□□ 1.49
RARA-206ENST00000425707 POLA1P09884 1462 aaPredicted RBP24.36■■□□□ 1.49
RARA-206ENST00000425707 TOPBP1Q92547 1522 aa24.36■■□□□ 1.49
RARA-206ENST00000425707 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
RARA-206ENST00000425707 SUPT6HQ7KZ85 1726 aaKnown RBP24.31■■□□□ 1.48
RARA-206ENST00000425707 KDM5BQ9UGL1 1544 aa24.3■■□□□ 1.48
RARA-206ENST00000425707 LRRIQ1Q96JM4 1722 aa24.3■■□□□ 1.48
RARA-206ENST00000425707 NAIPQ13075 1403 aa24.29■■□□□ 1.48
RARA-206ENST00000425707 MYOM3Q5VTT5 1437 aa24.29■■□□□ 1.48
RARA-206ENST00000425707 EHBP1L1Q8N3D4 1523 aa24.29■■□□□ 1.48
RARA-206ENST00000425707 RAD54L2Q9Y4B4 1467 aa24.29■■□□□ 1.48
RARA-206ENST00000425707 NESP48681 1621 aa24.28■■□□□ 1.48
RARA-206ENST00000425707 GRIN2BQ13224 1484 aa24.28■■□□□ 1.48
RARA-206ENST00000425707 P3H3Q8IVL6 736 aa24.27■■□□□ 1.48
RARA-206ENST00000425707 PTPRKQ15262 1439 aa24.27■■□□□ 1.48
RARA-206ENST00000425707 MTUS2Q5JR59 1369 aa24.26■■□□□ 1.47
RARA-206ENST00000425707 ARHGEF11O15085 1522 aa24.26■■□□□ 1.47
RARA-206ENST00000425707 NCOA2Q15596 1464 aa24.25■■□□□ 1.47
RARA-206ENST00000425707 GCC2Q8IWJ2 1684 aa24.25■■□□□ 1.47
RARA-206ENST00000425707 BCANQ96GW7 911 aa24.25■■□□□ 1.47
RARA-206ENST00000425707 HECW1Q76N89 1606 aa24.23■■□□□ 1.47
RARA-206ENST00000425707 AKNAQ7Z591 1439 aa24.23■■□□□ 1.47
RARA-206ENST00000425707 ABCA5Q8WWZ7 1642 aa24.23■■□□□ 1.47
RARA-206ENST00000425707 ATP1B4Q9UN42 357 aaPredicted RBP24.22■■□□□ 1.47
RARA-206ENST00000425707 UGGT2Q9NYU1 1516 aa24.21■■□□□ 1.47
RARA-206ENST00000425707 RBM19Q9Y4C8 960 aaKnown RBP24.21■■□□□ 1.47
RARA-206ENST00000425707 TCOF1Q13428 1488 aaKnown RBP24.21■■□□□ 1.47
RARA-206ENST00000425707 TRIM52Q96A61 297 aa24.19■■□□□ 1.46
RARA-206ENST00000425707 ERICH6BQ5W0A0 696 aa24.17■■□□□ 1.46
RARA-206ENST00000425707 HIRIP3Q9BW71 556 aaPredicted RBP24.15■■□□□ 1.46
RARA-206ENST00000425707 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
RARA-206ENST00000425707 URB2Q14146 1524 aaKnown RBP24.06■■□□□ 1.44
RARA-206ENST00000425707 DENND4BO75064 1496 aaPredicted RBP24.05■■□□□ 1.44
RARA-206ENST00000425707 GAPVD1Q14C86 1478 aa24.05■■□□□ 1.44
RARA-206ENST00000425707 FANCIQ9NVI1 1328 aa24.05■■□□□ 1.44
RARA-206ENST00000425707 MIA2Q96PC5 1412 aa24.05■■□□□ 1.44
RARA-206ENST00000425707 CNTLNQ9NXG0 1405 aa24.03■■□□□ 1.44
RARA-206ENST00000425707 MAGI3Q5TCQ9 1506 aa24.03■■□□□ 1.44
RARA-206ENST00000425707 WASHC2AQ641Q2 1341 aa24.01■■□□□ 1.43
RARA-206ENST00000425707 POLR1AO95602 1720 aaPredicted RBP24.01■■□□□ 1.43
RARA-206ENST00000425707 HNRNPUQ00839 825 aaKnown RBP eCLIP23.99■■□□□ 1.43
RARA-206ENST00000425707 HSPA5P11021 654 aaKnown RBP23.98■■□□□ 1.43
RARA-206ENST00000425707 EIF4G2P78344 907 aaKnown RBP eCLIP23.97■■□□□ 1.431e-6■■■■■ 32.1
RARA-206ENST00000425707 NCOA1Q15788 1441 aa23.97■■□□□ 1.43
RARA-206ENST00000425707 CDK11AQ9UQ88 783 aaPredicted RBP23.94■■□□□ 1.42
RARA-206ENST00000425707 KDM6BO15054 1643 aa23.92■■□□□ 1.42
RARA-206ENST00000425707 ROCK1Q13464 1354 aa23.92■■□□□ 1.42
RARA-206ENST00000425707 EPRSP07814 1512 aaKnown RBP23.91■■□□□ 1.42
RARA-206ENST00000425707 TARBP1Q13395 1621 aaKnown RBP23.9■■□□□ 1.42
RARA-206ENST00000425707 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.42
RARA-206ENST00000425707 CCDC7Q96M83 1385 aa23.89■■□□□ 1.42
RARA-206ENST00000425707 PPP4R2Q9NY27 417 aa23.89■■□□□ 1.41
RARA-206ENST00000425707 RPRD2Q5VT52 1461 aaKnown RBP23.89■■□□□ 1.41
RARA-206ENST00000425707 IQGAP2Q13576 1575 aa23.87■■□□□ 1.41
RARA-206ENST00000425707 WDR62O43379 1518 aa23.87■■□□□ 1.41
RARA-206ENST00000425707 PDS5BQ9NTI5 1447 aa23.86■■□□□ 1.41
RARA-206ENST00000425707 MPHOSPH9Q99550 1183 aa23.86■■□□□ 1.41
RARA-206ENST00000425707 ZBED9Q6R2W3 1325 aa23.85■■□□□ 1.41
RARA-206ENST00000425707 PBRM1Q86U86 1689 aa23.85■■□□□ 1.41
RARA-206ENST00000425707 TEX14Q8IWB6 1497 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms