RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 LRRC9Q6ZRR7 1453 aa20.46■□□□□ 0.87
TPM3P9-201ENST00000424846 ATP1B4Q9UN42 357 aaPredicted RBP20.45■□□□□ 0.86
TPM3P9-201ENST00000424846 SETD5Q9C0A6 1442 aa20.45■□□□□ 0.86
TPM3P9-201ENST00000424846 WDR97A6NE52 1622 aa20.44■□□□□ 0.86
TPM3P9-201ENST00000424846 HIRIP3Q9BW71 556 aaPredicted RBP20.43■□□□□ 0.86
TPM3P9-201ENST00000424846 DDX10Q13206 875 aaKnown RBP20.42■□□□□ 0.86
TPM3P9-201ENST00000424846 PRDM2Q13029 1718 aa20.4■□□□□ 0.86
TPM3P9-201ENST00000424846 CADPSQ9ULU8 1353 aa20.4■□□□□ 0.86
TPM3P9-201ENST00000424846 MAP3K1Q13233 1512 aa20.39■□□□□ 0.85
TPM3P9-201ENST00000424846 PCF11O94913 1555 aaKnown RBP20.39■□□□□ 0.85
TPM3P9-201ENST00000424846 FHOD3Q2V2M9 1422 aa20.36■□□□□ 0.85
TPM3P9-201ENST00000424846 MYT1Q01538 1121 aa20.36■□□□□ 0.85
TPM3P9-201ENST00000424846 TSHZ2Q9NRE2 1034 aa20.34■□□□□ 0.85
TPM3P9-201ENST00000424846 BCANQ96GW7 911 aa20.33■□□□□ 0.84
TPM3P9-201ENST00000424846 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
TPM3P9-201ENST00000424846 CFAP43Q8NDM7 1665 aa20.3■□□□□ 0.84
TPM3P9-201ENST00000424846 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
TPM3P9-201ENST00000424846 PPP1R15AO75807 674 aaPredicted RBP20.28■□□□□ 0.84
TPM3P9-201ENST00000424846 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
TPM3P9-201ENST00000424846 FKBP8Q14318 412 aa20.21■□□□□ 0.83
TPM3P9-201ENST00000424846 TRIM52Q96A61 297 aa20.2■□□□□ 0.82
TPM3P9-201ENST00000424846 PTPRKQ15262 1439 aa20.18■□□□□ 0.82
TPM3P9-201ENST00000424846 POLA1P09884 1462 aaPredicted RBP20.17■□□□□ 0.82
TPM3P9-201ENST00000424846 FYCO1Q9BQS8 1478 aa20.17■□□□□ 0.82
TPM3P9-201ENST00000424846 NESP48681 1621 aa20.17■□□□□ 0.82
TPM3P9-201ENST00000424846 CASKIN1Q8WXD9 1431 aa20.17■□□□□ 0.82
TPM3P9-201ENST00000424846 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
TPM3P9-201ENST00000424846 ABCA10Q8WWZ4 1543 aa20.14■□□□□ 0.81
TPM3P9-201ENST00000424846 FGD6Q6ZV73 1430 aa20.14■□□□□ 0.81
TPM3P9-201ENST00000424846 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
TPM3P9-201ENST00000424846 DNMBPQ6XZF7 1577 aa20.11■□□□□ 0.81
TPM3P9-201ENST00000424846 TIMELESSQ9UNS1 1208 aa20.1■□□□□ 0.81
TPM3P9-201ENST00000424846 CCDC18Q5T9S5 1454 aa20.1■□□□□ 0.81
TPM3P9-201ENST00000424846 EFCAB5A4FU69 1503 aa20.09■□□□□ 0.81
TPM3P9-201ENST00000424846 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
TPM3P9-201ENST00000424846 AQRO60306 1485 aaKnown RBP eCLIP20.08■□□□□ 0.8
TPM3P9-201ENST00000424846 MTUS2Q5JR59 1369 aa20.07■□□□□ 0.8
TPM3P9-201ENST00000424846 TONSLQ96HA7 1378 aa20.07■□□□□ 0.8
TPM3P9-201ENST00000424846 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.07■□□□□ 0.8
TPM3P9-201ENST00000424846 CTTNBP2Q8WZ74 1663 aa20.07■□□□□ 0.8
TPM3P9-201ENST00000424846 LRRIQ1Q96JM4 1722 aa20.07■□□□□ 0.8
TPM3P9-201ENST00000424846 ANP32CO43423 234 aa20.07■□□□□ 0.8
TPM3P9-201ENST00000424846 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
TPM3P9-201ENST00000424846 CCER2I3L3R5 266 aa20.03■□□□□ 0.8
TPM3P9-201ENST00000424846 PTPN23Q9H3S7 1636 aa20.02■□□□□ 0.8
TPM3P9-201ENST00000424846 HFM1A2PYH4 1435 aa20.02■□□□□ 0.8
TPM3P9-201ENST00000424846 FMN1Q68DA7 1419 aa20.02■□□□□ 0.8
TPM3P9-201ENST00000424846 CUL7Q14999 1698 aa20.01■□□□□ 0.79
TPM3P9-201ENST00000424846 NAIPQ13075 1403 aa20.01■□□□□ 0.79
TPM3P9-201ENST00000424846 UACAQ9BZF9 1416 aa20.01■□□□□ 0.79
TPM3P9-201ENST00000424846 NCOA2Q15596 1464 aa20■□□□□ 0.79
TPM3P9-201ENST00000424846 KDM5BQ9UGL1 1544 aa19.99■□□□□ 0.79
TPM3P9-201ENST00000424846 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
TPM3P9-201ENST00000424846 RRP7BPQ9NSQ0 103 aa19.97■□□□□ 0.79
TPM3P9-201ENST00000424846 CHIC2Q9UKJ5 165 aa19.97■□□□□ 0.79
TPM3P9-201ENST00000424846 MYOM3Q5VTT5 1437 aa19.95■□□□□ 0.78
TPM3P9-201ENST00000424846 ANP32EQ9BTT0 268 aa19.95■□□□□ 0.78
TPM3P9-201ENST00000424846 GRIN2BQ13224 1484 aa19.94■□□□□ 0.78
TPM3P9-201ENST00000424846 MAGI3Q5TCQ9 1506 aa19.94■□□□□ 0.78
TPM3P9-201ENST00000424846 NEFLP07196 543 aa19.94■□□□□ 0.78
TPM3P9-201ENST00000424846 SAMD9Q5K651 1589 aa19.94■□□□□ 0.78
TPM3P9-201ENST00000424846 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
TPM3P9-201ENST00000424846 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
TPM3P9-201ENST00000424846 RBM19Q9Y4C8 960 aaKnown RBP19.9■□□□□ 0.78
TPM3P9-201ENST00000424846 IRX6P78412 446 aaPredicted RBP19.9■□□□□ 0.78
TPM3P9-201ENST00000424846 ARID3CA6NKF2 412 aa19.89■□□□□ 0.78
TPM3P9-201ENST00000424846 WASHC2AQ641Q2 1341 aa19.89■□□□□ 0.77
TPM3P9-201ENST00000424846 KDM6BO15054 1643 aa19.88■□□□□ 0.77
TPM3P9-201ENST00000424846 GAPVD1Q14C86 1478 aa19.88■□□□□ 0.77
TPM3P9-201ENST00000424846 ABCA5Q8WWZ7 1642 aa19.88■□□□□ 0.77
TPM3P9-201ENST00000424846 HSPA5P11021 654 aaKnown RBP19.88■□□□□ 0.77
TPM3P9-201ENST00000424846 HNRNPUQ00839 825 aaKnown RBP eCLIP19.88■□□□□ 0.77
TPM3P9-201ENST00000424846 FOXD1Q16676 465 aa19.87■□□□□ 0.77
TPM3P9-201ENST00000424846 SUPT6HQ7KZ85 1726 aaKnown RBP19.87■□□□□ 0.77
TPM3P9-201ENST00000424846 CCDC184Q52MB2 194 aa19.86■□□□□ 0.77
TPM3P9-201ENST00000424846 UGGT2Q9NYU1 1516 aa19.85■□□□□ 0.77
TPM3P9-201ENST00000424846 EHBP1L1Q8N3D4 1523 aa19.83■□□□□ 0.77
TPM3P9-201ENST00000424846 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
TPM3P9-201ENST00000424846 C11orf95C9JLR9 678 aaPredicted RBP19.81■□□□□ 0.76
TPM3P9-201ENST00000424846 LAMC3Q9Y6N6 1575 aa19.79■□□□□ 0.76
TPM3P9-201ENST00000424846 L3MBTL2Q969R5 705 aa19.77■□□□□ 0.76
TPM3P9-201ENST00000424846 THOC2Q8NI27 1593 aaKnown RBP19.77■□□□□ 0.76
TPM3P9-201ENST00000424846 CDK13Q14004 1512 aaKnown RBP19.77■□□□□ 0.75
TPM3P9-201ENST00000424846 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
TPM3P9-201ENST00000424846 TCOF1Q13428 1488 aaKnown RBP19.74■□□□□ 0.75
TPM3P9-201ENST00000424846 GCC2Q8IWJ2 1684 aa19.73■□□□□ 0.75
TPM3P9-201ENST00000424846 MSH5O43196 834 aa19.73■□□□□ 0.75
TPM3P9-201ENST00000424846 EIF4G2P78344 907 aaKnown RBP eCLIP19.73■□□□□ 0.75
TPM3P9-201ENST00000424846 HECW1Q76N89 1606 aa19.72■□□□□ 0.75
TPM3P9-201ENST00000424846 EPRSP07814 1512 aaKnown RBP19.71■□□□□ 0.75
TPM3P9-201ENST00000424846 NBPF8Q3BBV2 869 aa19.71■□□□□ 0.75
TPM3P9-201ENST00000424846 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
TPM3P9-201ENST00000424846 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
TPM3P9-201ENST00000424846 ZNF644Q9H582 1327 aaPredicted RBP19.68■□□□□ 0.74
TPM3P9-201ENST00000424846 FAM9BQ8IZU0 186 aa19.68■□□□□ 0.74
TPM3P9-201ENST00000424846 CNTLNQ9NXG0 1405 aa19.68■□□□□ 0.74
TPM3P9-201ENST00000424846 PRKRIP1Q9H875 184 aaPredicted RBP19.65■□□□□ 0.74
TPM3P9-201ENST00000424846 CCDC7Q96M83 1385 aa19.65■□□□□ 0.74
TPM3P9-201ENST00000424846 PDS5BQ9NTI5 1447 aa19.65■□□□□ 0.74
TPM3P9-201ENST00000424846 NCOA1Q15788 1441 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms