RNA–Protein interactions for RNA: ENST00000422465.6

RPS3-202, Transcript of ribosomal protein S3, humanhuman

TSL 2

Gene RPS3, Length 903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-202ENST00000422465 ARAP1Q96P48 1450 aa17.14■□□□□ 0.33
RPS3-202ENST00000422465 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
RPS3-202ENST00000422465 CAPN15O75808 1086 aa17.13■□□□□ 0.33
RPS3-202ENST00000422465 CHD1O14646 1710 aa17.1■□□□□ 0.33
RPS3-202ENST00000422465 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
RPS3-202ENST00000422465 AQRO60306 1485 aaKnown RBP eCLIP17.02■□□□□ 0.321e-7■■■■■ 28
RPS3-202ENST00000422465 FBLN2P98095 1184 aa17.02■□□□□ 0.32
RPS3-202ENST00000422465 TARBP1Q13395 1621 aaKnown RBP17.02■□□□□ 0.31
RPS3-202ENST00000422465 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
RPS3-202ENST00000422465 CCDC88BA6NC98 1476 aa17■□□□□ 0.31
RPS3-202ENST00000422465 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
RPS3-202ENST00000422465 WDR97A6NE52 1622 aa16.92■□□□□ 0.3
RPS3-202ENST00000422465 CLASP1Q7Z460 1538 aa16.92■□□□□ 0.3
RPS3-202ENST00000422465 LOC105371045A0A1W2PR82 267 aa16.92■□□□□ 0.3
RPS3-202ENST00000422465 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
RPS3-202ENST00000422465 DSG3P32926 999 aa16.87■□□□□ 0.29
RPS3-202ENST00000422465 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
RPS3-202ENST00000422465 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
RPS3-202ENST00000422465 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
RPS3-202ENST00000422465 SOGA1O94964 1423 aa16.86■□□□□ 0.29
RPS3-202ENST00000422465 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
RPS3-202ENST00000422465 ABCB7O75027 752 aa16.83■□□□□ 0.28
RPS3-202ENST00000422465 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.28
RPS3-202ENST00000422465 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
RPS3-202ENST00000422465 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
RPS3-202ENST00000422465 GAPVD1Q14C86 1478 aa16.79■□□□□ 0.28
RPS3-202ENST00000422465 POLA2Q14181 598 aa16.77■□□□□ 0.28
RPS3-202ENST00000422465 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
RPS3-202ENST00000422465 FAM9AQ8IZU1 332 aaPredicted RBP16.67■□□□□ 0.26
RPS3-202ENST00000422465 PBRM1Q86U86 1689 aa16.65■□□□□ 0.26
RPS3-202ENST00000422465 CUX1P39880 1505 aa16.64■□□□□ 0.25
RPS3-202ENST00000422465 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
RPS3-202ENST00000422465 EEA1Q15075 1411 aa16.57■□□□□ 0.24
RPS3-202ENST00000422465 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
RPS3-202ENST00000422465 ABCA5Q8WWZ7 1642 aa16.56■□□□□ 0.24
RPS3-202ENST00000422465 GRIN2AQ12879 1464 aa16.55■□□□□ 0.24
RPS3-202ENST00000422465 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.248e-7■□□□□ 9.9
RPS3-202ENST00000422465 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
RPS3-202ENST00000422465 ERCC6L2Q5T890 1561 aa16.54■□□□□ 0.24
RPS3-202ENST00000422465 NUP160Q12769 1436 aa16.53■□□□□ 0.24
RPS3-202ENST00000422465 KIF13AQ9H1H9 1805 aa16.52■□□□□ 0.23
RPS3-202ENST00000422465 HRCP23327 699 aa16.51■□□□□ 0.23
RPS3-202ENST00000422465 SHROOM2Q13796 1616 aa16.5■□□□□ 0.23
RPS3-202ENST00000422465 TRIM26Q12899 539 aaPredicted RBP16.5■□□□□ 0.23
RPS3-202ENST00000422465 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
RPS3-202ENST00000422465 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
RPS3-202ENST00000422465 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
RPS3-202ENST00000422465 ZBTB12Q9Y330 459 aaPredicted RBP16.43■□□□□ 0.22
RPS3-202ENST00000422465 ABCC10Q5T3U5 1492 aa16.42■□□□□ 0.22
RPS3-202ENST00000422465 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
RPS3-202ENST00000422465 NPM1P06748 294 aaKnown RBP eCLIP16.41■□□□□ 0.223e-45■□□□□ 8.2
RPS3-202ENST00000422465 FAM69CQ0P6D2 419 aa16.4■□□□□ 0.22
RPS3-202ENST00000422465 TNIKQ9UKE5 1360 aa16.39■□□□□ 0.21
RPS3-202ENST00000422465 MAPKBP1O60336 1514 aa16.39■□□□□ 0.21
RPS3-202ENST00000422465 TOP2BQ02880 1626 aa16.38■□□□□ 0.21
RPS3-202ENST00000422465 PRG4Q92954 1404 aaPredicted RBP16.38■□□□□ 0.21
RPS3-202ENST00000422465 ERICH3Q5RHP9 1530 aa16.37■□□□□ 0.21
RPS3-202ENST00000422465 ILDR1Q86SU0 546 aaPredicted RBP16.37■□□□□ 0.21
RPS3-202ENST00000422465 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
RPS3-202ENST00000422465 KDM6BO15054 1643 aa16.36■□□□□ 0.21
RPS3-202ENST00000422465 KDM4FA0A1W2PPD8 638 aa16.35■□□□□ 0.21
RPS3-202ENST00000422465 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
RPS3-202ENST00000422465 DIP2BQ9P265 1576 aa16.34■□□□□ 0.21
RPS3-202ENST00000422465 JPH4Q96JJ6 628 aa16.34■□□□□ 0.21
RPS3-202ENST00000422465 KIF21BO75037 1637 aa16.34■□□□□ 0.21
RPS3-202ENST00000422465 CEP162Q5TB80 1403 aa16.31■□□□□ 0.2
RPS3-202ENST00000422465 ADCY10Q96PN6 1610 aa16.25■□□□□ 0.19
RPS3-202ENST00000422465 TSPOAP1O95153 1857 aa16.2■□□□□ 0.18
RPS3-202ENST00000422465 UBTFP17480 764 aaKnown RBP16.19■□□□□ 0.18
RPS3-202ENST00000422465 KIAA0586Q9BVV6 1533 aa16.14■□□□□ 0.18
RPS3-202ENST00000422465 ADGRL1O94910 1474 aa16.14■□□□□ 0.17
RPS3-202ENST00000422465 PRXQ9BXM0 1461 aa16.13■□□□□ 0.17
RPS3-202ENST00000422465 RAPGEF2Q9Y4G8 1499 aa16.13■□□□□ 0.17
RPS3-202ENST00000422465 GLI2P10070 1586 aa16.11■□□□□ 0.17
RPS3-202ENST00000422465 KIF27Q86VH2 1401 aa16.1■□□□□ 0.17
RPS3-202ENST00000422465 PLB1Q6P1J6 1458 aa16.1■□□□□ 0.17
RPS3-202ENST00000422465 ZEB1P37275 1124 aaPredicted RBP16.09■□□□□ 0.17
RPS3-202ENST00000422465 PTPRGP23470 1445 aa16.09■□□□□ 0.17
RPS3-202ENST00000422465 CLIP1P30622 1438 aa16.09■□□□□ 0.17
RPS3-202ENST00000422465 ABCC2Q92887 1545 aa16.08■□□□□ 0.16
RPS3-202ENST00000422465 HECW2Q9P2P5 1572 aa16.08■□□□□ 0.16
RPS3-202ENST00000422465 PPARGC1BQ86YN6 1023 aaKnown RBP16.05■□□□□ 0.16
RPS3-202ENST00000422465 PPRC1Q5VV67 1664 aaKnown RBP16.05■□□□□ 0.16
RPS3-202ENST00000422465 CARMIL2Q6F5E8 1435 aa16.04■□□□□ 0.16
RPS3-202ENST00000422465 ASXL2Q76L83 1435 aa16.04■□□□□ 0.16
RPS3-202ENST00000422465 CUL7Q14999 1698 aa16.04■□□□□ 0.16
RPS3-202ENST00000422465 SPDYE2BA6NHP3 402 aa16.03■□□□□ 0.16
RPS3-202ENST00000422465 SPDYE6P0CI01 402 aa16.03■□□□□ 0.16
RPS3-202ENST00000422465 FKBP8Q14318 412 aa16.03■□□□□ 0.16
RPS3-202ENST00000422465 SPDYE2Q495Y8 402 aa16.03■□□□□ 0.16
RPS3-202ENST00000422465 TEX14Q8IWB6 1497 aa16.03■□□□□ 0.16
RPS3-202ENST00000422465 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.16
RPS3-202ENST00000422465 VPS8Q8N3P4 1428 aa16.02■□□□□ 0.15
RPS3-202ENST00000422465 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
RPS3-202ENST00000422465 UHRF1BP1LA0JNW5 1464 aa16.01■□□□□ 0.15
RPS3-202ENST00000422465 IGF1RP08069 1367 aa15.99■□□□□ 0.15
RPS3-202ENST00000422465 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
RPS3-202ENST00000422465 MAP3K4Q9Y6R4 1608 aa15.97■□□□□ 0.15
RPS3-202ENST00000422465 COL17A1Q9UMD9 1497 aaPredicted RBP15.96■□□□□ 0.14
RPS3-202ENST00000422465 UACAQ9BZF9 1416 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms