RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 PHLDB1Q86UU1 1377 aa25.99■■□□□ 1.75
SCARB1-203ENST00000415380 SUPT16HQ9Y5B9 1047 aaKnown RBP25.95■■□□□ 1.75
SCARB1-203ENST00000415380 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
SCARB1-203ENST00000415380 CFAP43Q8NDM7 1665 aa25.93■■□□□ 1.74
SCARB1-203ENST00000415380 PCF11O94913 1555 aaKnown RBP25.91■■□□□ 1.74
SCARB1-203ENST00000415380 FAM50AQ14320 339 aaKnown RBP25.89■■□□□ 1.73
SCARB1-203ENST00000415380 P3H3Q8IVL6 736 aa25.87■■□□□ 1.73
SCARB1-203ENST00000415380 WDR97A6NE52 1622 aa25.84■■□□□ 1.73
SCARB1-203ENST00000415380 SIN3AQ96ST3 1273 aa25.84■■□□□ 1.73
SCARB1-203ENST00000415380 KCNH8Q96L42 1107 aa25.83■■□□□ 1.73
SCARB1-203ENST00000415380 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
SCARB1-203ENST00000415380 ATP1B4Q9UN42 357 aaPredicted RBP25.8■■□□□ 1.72
SCARB1-203ENST00000415380 FHOD3Q2V2M9 1422 aa25.8■■□□□ 1.72
SCARB1-203ENST00000415380 FYCO1Q9BQS8 1478 aa25.78■■□□□ 1.72
SCARB1-203ENST00000415380 RAD54L2Q9Y4B4 1467 aa25.76■■□□□ 1.71
SCARB1-203ENST00000415380 EFCAB5A4FU69 1503 aa25.75■■□□□ 1.71
SCARB1-203ENST00000415380 DNMBPQ6XZF7 1577 aa25.74■■□□□ 1.71
SCARB1-203ENST00000415380 ABCA10Q8WWZ4 1543 aa25.74■■□□□ 1.71
SCARB1-203ENST00000415380 CASKIN1Q8WXD9 1431 aa25.74■■□□□ 1.71
SCARB1-203ENST00000415380 TIMELESSQ9UNS1 1208 aa25.72■■□□□ 1.71
SCARB1-203ENST00000415380 DDX10Q13206 875 aaKnown RBP25.72■■□□□ 1.71
SCARB1-203ENST00000415380 CC2D2AQ9P2K1 1620 aa25.72■■□□□ 1.71
SCARB1-203ENST00000415380 AQRO60306 1485 aaKnown RBP eCLIP25.71■■□□□ 1.717e-7■■■■■ 33.9
SCARB1-203ENST00000415380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.71■■□□□ 1.713e-11■■■□□ 17
SCARB1-203ENST00000415380 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.7
SCARB1-203ENST00000415380 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
SCARB1-203ENST00000415380 CUL7Q14999 1698 aa25.66■■□□□ 1.7
SCARB1-203ENST00000415380 PPP1R15AO75807 674 aaPredicted RBP25.66■■□□□ 1.7
SCARB1-203ENST00000415380 CTTNBP2Q8WZ74 1663 aa25.65■■□□□ 1.7
SCARB1-203ENST00000415380 FGD6Q6ZV73 1430 aa25.61■■□□□ 1.69
SCARB1-203ENST00000415380 FMN1Q68DA7 1419 aa25.6■■□□□ 1.69
SCARB1-203ENST00000415380 HIRIP3Q9BW71 556 aaPredicted RBP25.58■■□□□ 1.69
SCARB1-203ENST00000415380 TSHZ2Q9NRE2 1034 aa25.58■■□□□ 1.69
SCARB1-203ENST00000415380 SNAPC4Q5SXM2 1469 aa25.58■■□□□ 1.69
SCARB1-203ENST00000415380 NESP48681 1621 aa25.55■■□□□ 1.68
SCARB1-203ENST00000415380 CCDC18Q5T9S5 1454 aa25.54■■□□□ 1.68
SCARB1-203ENST00000415380 MTUS2Q5JR59 1369 aa25.52■■□□□ 1.68
SCARB1-203ENST00000415380 PTPRKQ15262 1439 aa25.51■■□□□ 1.67
SCARB1-203ENST00000415380 HFM1A2PYH4 1435 aa25.5■■□□□ 1.67
SCARB1-203ENST00000415380 TONSLQ96HA7 1378 aa25.49■■□□□ 1.67
SCARB1-203ENST00000415380 CCER2I3L3R5 266 aa25.49■■□□□ 1.67
SCARB1-203ENST00000415380 PTPN23Q9H3S7 1636 aa25.48■■□□□ 1.67
SCARB1-203ENST00000415380 UACAQ9BZF9 1416 aa25.47■■□□□ 1.67
SCARB1-203ENST00000415380 SAMD9Q5K651 1589 aa25.47■■□□□ 1.67
SCARB1-203ENST00000415380 LRRIQ1Q96JM4 1722 aa25.47■■□□□ 1.67
SCARB1-203ENST00000415380 ANP32CO43423 234 aa25.46■■□□□ 1.67
SCARB1-203ENST00000415380 FKBP8Q14318 412 aa25.45■■□□□ 1.67
SCARB1-203ENST00000415380 BCANQ96GW7 911 aa25.45■■□□□ 1.66
SCARB1-203ENST00000415380 URB2Q14146 1524 aaKnown RBP25.44■■□□□ 1.66
SCARB1-203ENST00000415380 NCOA2Q15596 1464 aa25.43■■□□□ 1.66
SCARB1-203ENST00000415380 GRIN2BQ13224 1484 aa25.42■■□□□ 1.66
SCARB1-203ENST00000415380 MYOM3Q5VTT5 1437 aa25.42■■□□□ 1.66
SCARB1-203ENST00000415380 NAIPQ13075 1403 aa25.41■■□□□ 1.66
SCARB1-203ENST00000415380 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
SCARB1-203ENST00000415380 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
SCARB1-203ENST00000415380 THOC2Q8NI27 1593 aaKnown RBP25.37■■□□□ 1.65
SCARB1-203ENST00000415380 TRIM52Q96A61 297 aa25.37■■□□□ 1.65
SCARB1-203ENST00000415380 SUPT6HQ7KZ85 1726 aaKnown RBP25.37■■□□□ 1.65
SCARB1-203ENST00000415380 GAPVD1Q14C86 1478 aa25.35■■□□□ 1.65
SCARB1-203ENST00000415380 EHBP1L1Q8N3D4 1523 aa25.35■■□□□ 1.65
SCARB1-203ENST00000415380 LAMC3Q9Y6N6 1575 aa25.34■■□□□ 1.65
SCARB1-203ENST00000415380 KDM5BQ9UGL1 1544 aa25.32■■□□□ 1.64
SCARB1-203ENST00000415380 NEFLP07196 543 aa25.3■■□□□ 1.64
SCARB1-203ENST00000415380 UGGT2Q9NYU1 1516 aa25.3■■□□□ 1.64
SCARB1-203ENST00000415380 ARHGEF11O15085 1522 aa25.28■■□□□ 1.64
SCARB1-203ENST00000415380 MAGI3Q5TCQ9 1506 aa25.27■■□□□ 1.64
SCARB1-203ENST00000415380 KIF21AQ7Z4S6 1674 aa25.25■■□□□ 1.63
SCARB1-203ENST00000415380 RRP7BPQ9NSQ0 103 aa25.21■■□□□ 1.63
SCARB1-203ENST00000415380 TCOF1Q13428 1488 aaKnown RBP25.21■■□□□ 1.63
SCARB1-203ENST00000415380 GCC2Q8IWJ2 1684 aa25.19■■□□□ 1.62
SCARB1-203ENST00000415380 DENND4BO75064 1496 aaPredicted RBP25.18■■□□□ 1.62
SCARB1-203ENST00000415380 CHIC2Q9UKJ5 165 aa25.18■■□□□ 1.62
SCARB1-203ENST00000415380 ANP32EQ9BTT0 268 aa25.18■■□□□ 1.62
SCARB1-203ENST00000415380 HECW1Q76N89 1606 aa25.17■■□□□ 1.62
SCARB1-203ENST00000415380 PDS5BQ9NTI5 1447 aa25.17■■□□□ 1.62
SCARB1-203ENST00000415380 HSPA5P11021 654 aaKnown RBP25.14■■□□□ 1.61
SCARB1-203ENST00000415380 KDM6BO15054 1643 aa25.13■■□□□ 1.61
SCARB1-203ENST00000415380 TARBP1Q13395 1621 aaKnown RBP25.13■■□□□ 1.61
SCARB1-203ENST00000415380 WASHC2AQ641Q2 1341 aa25.13■■□□□ 1.61
SCARB1-203ENST00000415380 AKNAQ7Z591 1439 aa25.13■■□□□ 1.61
SCARB1-203ENST00000415380 EPRSP07814 1512 aaKnown RBP25.11■■□□□ 1.61
SCARB1-203ENST00000415380 HNRNPUQ00839 825 aaKnown RBP eCLIP25.08■■□□□ 1.612e-6■□□□□ 11
SCARB1-203ENST00000415380 RBM19Q9Y4C8 960 aaKnown RBP25.07■■□□□ 1.6
SCARB1-203ENST00000415380 MIA2Q96PC5 1412 aa25.06■■□□□ 1.6
SCARB1-203ENST00000415380 IQGAP2Q13576 1575 aa25.06■■□□□ 1.6
SCARB1-203ENST00000415380 CDK13Q14004 1512 aaKnown RBP25.06■■□□□ 1.6
SCARB1-203ENST00000415380 MPHOSPH9Q99550 1183 aa25.06■■□□□ 1.6
SCARB1-203ENST00000415380 PBRM1Q86U86 1689 aa25.05■■□□□ 1.6
SCARB1-203ENST00000415380 EIF4G2P78344 907 aaKnown RBP eCLIP25.05■■□□□ 1.62e-9■■■■□ 23.9
SCARB1-203ENST00000415380 WDR62O43379 1518 aa25.02■■□□□ 1.6
SCARB1-203ENST00000415380 L3MBTL2Q969R5 705 aa25■■□□□ 1.59
SCARB1-203ENST00000415380 DNAJC5BQ9UF47 199 aa25■■□□□ 1.59
SCARB1-203ENST00000415380 CNTLNQ9NXG0 1405 aa25■■□□□ 1.59
SCARB1-203ENST00000415380 ADAMTS12P58397 1594 aa24.99■■□□□ 1.59
SCARB1-203ENST00000415380 FOXD1Q16676 465 aa24.98■■□□□ 1.59
SCARB1-203ENST00000415380 ARID3CA6NKF2 412 aa24.98■■□□□ 1.59
SCARB1-203ENST00000415380 NCOA1Q15788 1441 aa24.93■■□□□ 1.58
SCARB1-203ENST00000415380 C11orf95C9JLR9 678 aaPredicted RBP24.93■■□□□ 1.58
SCARB1-203ENST00000415380 CCDC184Q52MB2 194 aa24.92■■□□□ 1.58
SCARB1-203ENST00000415380 CCDC7Q96M83 1385 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms