RNA–Protein interactions for RNA: ENST00000401596.1

CNN3P1-201, Transcript of calponin 3 pseudogene 1, humanhuman

BASIC

Gene CNN3P1, Length 935 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3P1-201ENST00000401596 TNIKQ9UKE5 1360 aa11.93□□□□□ -0.5
CNN3P1-201ENST00000401596 TOPBP1Q92547 1522 aa11.93□□□□□ -0.5
CNN3P1-201ENST00000401596 FGD5Q6ZNL6 1462 aa11.92□□□□□ -0.5
CNN3P1-201ENST00000401596 FBLN2P98095 1184 aa11.92□□□□□ -0.5
CNN3P1-201ENST00000401596 EIF4G3O43432 1585 aaKnown RBP11.92□□□□□ -0.5
CNN3P1-201ENST00000401596 GOLGA3Q08378 1498 aa11.91□□□□□ -0.5
CNN3P1-201ENST00000401596 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
CNN3P1-201ENST00000401596 PRXQ9BXM0 1461 aa11.9□□□□□ -0.5
CNN3P1-201ENST00000401596 KIF27Q86VH2 1401 aa11.9□□□□□ -0.5
CNN3P1-201ENST00000401596 ERICH3Q5RHP9 1530 aa11.89□□□□□ -0.51
CNN3P1-201ENST00000401596 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
CNN3P1-201ENST00000401596 POLA1P09884 1462 aaPredicted RBP11.87□□□□□ -0.51
CNN3P1-201ENST00000401596 KDM4FA0A1W2PPD8 638 aa11.86□□□□□ -0.51
CNN3P1-201ENST00000401596 RAPGEF2Q9Y4G8 1499 aa11.83□□□□□ -0.52
CNN3P1-201ENST00000401596 WDR97A6NE52 1622 aa11.83□□□□□ -0.52
CNN3P1-201ENST00000401596 IGF1RP08069 1367 aa11.83□□□□□ -0.52
CNN3P1-201ENST00000401596 CEP162Q5TB80 1403 aa11.81□□□□□ -0.52
CNN3P1-201ENST00000401596 ERCC6L2Q5T890 1561 aa11.8□□□□□ -0.52
CNN3P1-201ENST00000401596 LMTK3Q96Q04 1460 aa11.8□□□□□ -0.52
CNN3P1-201ENST00000401596 RAD54L2Q9Y4B4 1467 aa11.79□□□□□ -0.52
CNN3P1-201ENST00000401596 CLASP1Q7Z460 1538 aa11.79□□□□□ -0.52
CNN3P1-201ENST00000401596 KIF13AQ9H1H9 1805 aa11.78□□□□□ -0.52
CNN3P1-201ENST00000401596 AQRO60306 1485 aaKnown RBP eCLIP11.77□□□□□ -0.52
CNN3P1-201ENST00000401596 FBXO41Q8TF61 875 aa11.77□□□□□ -0.53
CNN3P1-201ENST00000401596 TARBP1Q13395 1621 aaKnown RBP11.77□□□□□ -0.53
CNN3P1-201ENST00000401596 ABCA5Q8WWZ7 1642 aa11.76□□□□□ -0.53
CNN3P1-201ENST00000401596 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
CNN3P1-201ENST00000401596 HECW2Q9P2P5 1572 aa11.75□□□□□ -0.53
CNN3P1-201ENST00000401596 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
CNN3P1-201ENST00000401596 CARMIL1Q5VZK9 1371 aa11.73□□□□□ -0.53
CNN3P1-201ENST00000401596 CUL7Q14999 1698 aa11.72□□□□□ -0.53
CNN3P1-201ENST00000401596 EHMT2Q96KQ7 1210 aa11.72□□□□□ -0.53
CNN3P1-201ENST00000401596 U3KPZ7 1027 aaPredicted RBP11.72□□□□□ -0.53
CNN3P1-201ENST00000401596 CLIP1P30622 1438 aa11.69□□□□□ -0.54
CNN3P1-201ENST00000401596 SOCS7O14512 581 aa11.69□□□□□ -0.54
CNN3P1-201ENST00000401596 KDM6BO15054 1643 aa11.66□□□□□ -0.54
CNN3P1-201ENST00000401596 TDRD9Q8NDG6 1382 aaKnown RBP11.65□□□□□ -0.55
CNN3P1-201ENST00000401596 SNAPC4Q5SXM2 1469 aa11.64□□□□□ -0.55
CNN3P1-201ENST00000401596 VPS8Q8N3P4 1428 aa11.64□□□□□ -0.55
CNN3P1-201ENST00000401596 TRIM26Q12899 539 aaPredicted RBP11.64□□□□□ -0.55
CNN3P1-201ENST00000401596 CHMP7Q8WUX9 453 aaPredicted RBP11.64□□□□□ -0.55
CNN3P1-201ENST00000401596 SLC4A1APQ9BWU0 796 aaKnown RBP11.63□□□□□ -0.55
CNN3P1-201ENST00000401596 ILDR2Q71H61 639 aa11.61□□□□□ -0.55
CNN3P1-201ENST00000401596 SPINK5Q9NQ38 1064 aaPredicted RBP11.61□□□□□ -0.55
CNN3P1-201ENST00000401596 ADGRL1O94910 1474 aa11.61□□□□□ -0.55
CNN3P1-201ENST00000401596 ARHGAP35Q9NRY4 1499 aa11.61□□□□□ -0.55
CNN3P1-201ENST00000401596 PBRM1Q86U86 1689 aa11.61□□□□□ -0.55
CNN3P1-201ENST00000401596 GRIN2BQ13224 1484 aa11.59□□□□□ -0.55
CNN3P1-201ENST00000401596 CAPN15O75808 1086 aa11.59□□□□□ -0.55
CNN3P1-201ENST00000401596 FHAD1B1AJZ9 1412 aa11.59□□□□□ -0.55
CNN3P1-201ENST00000401596 ADAMTS12P58397 1594 aa11.58□□□□□ -0.55
CNN3P1-201ENST00000401596 SYNJ2O15056 1496 aa11.58□□□□□ -0.56
CNN3P1-201ENST00000401596 TSPOAP1O95153 1857 aa11.57□□□□□ -0.56
CNN3P1-201ENST00000401596 CTTNBP2Q8WZ74 1663 aa11.57□□□□□ -0.56
CNN3P1-201ENST00000401596 FAM69CQ0P6D2 419 aa11.57□□□□□ -0.56
CNN3P1-201ENST00000401596 DISP3Q9P2K9 1392 aa11.55□□□□□ -0.56
CNN3P1-201ENST00000401596 SLC4A2P04920 1241 aa11.55□□□□□ -0.56
CNN3P1-201ENST00000401596 PCGF6Q9BYE7 350 aa11.55□□□□□ -0.56
CNN3P1-201ENST00000401596 EFCAB5A4FU69 1503 aa11.55□□□□□ -0.56
CNN3P1-201ENST00000401596 MAGI1Q96QZ7 1491 aaPredicted RBP11.54□□□□□ -0.56
CNN3P1-201ENST00000401596 ABCC10Q5T3U5 1492 aa11.51□□□□□ -0.57
CNN3P1-201ENST00000401596 MAP3K1Q13233 1512 aa11.51□□□□□ -0.57
CNN3P1-201ENST00000401596 SAMD9Q5K651 1589 aa11.51□□□□□ -0.57
CNN3P1-201ENST00000401596 DSG3P32926 999 aa11.51□□□□□ -0.57
CNN3P1-201ENST00000401596 DIP2BQ9P265 1576 aa11.5□□□□□ -0.57
CNN3P1-201ENST00000401596 CEP170Q5SW79 1584 aa11.46□□□□□ -0.57
CNN3P1-201ENST00000401596 GRIN2AQ12879 1464 aa11.46□□□□□ -0.57
CNN3P1-201ENST00000401596 UGGT2Q9NYU1 1516 aa11.45□□□□□ -0.58
CNN3P1-201ENST00000401596 KIAA0586Q9BVV6 1533 aa11.45□□□□□ -0.58
CNN3P1-201ENST00000401596 IQGAP2Q13576 1575 aa11.44□□□□□ -0.58
CNN3P1-201ENST00000401596 NUP160Q12769 1436 aa11.43□□□□□ -0.58
CNN3P1-201ENST00000401596 CASKIN1Q8WXD9 1431 aa11.43□□□□□ -0.58
CNN3P1-201ENST00000401596 FYCO1Q9BQS8 1478 aa11.41□□□□□ -0.58
CNN3P1-201ENST00000401596 RANGAP1P46060 587 aaPredicted RBP11.41□□□□□ -0.58
CNN3P1-201ENST00000401596 PPARGC1BQ86YN6 1023 aaKnown RBP11.41□□□□□ -0.58
CNN3P1-201ENST00000401596 FHOD3Q2V2M9 1422 aa11.41□□□□□ -0.58
CNN3P1-201ENST00000401596 FMN1Q68DA7 1419 aa11.41□□□□□ -0.58
CNN3P1-201ENST00000401596 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
CNN3P1-201ENST00000401596 MAPKBP1O60336 1514 aa11.4□□□□□ -0.58
CNN3P1-201ENST00000401596 NPM1P06748 294 aaKnown RBP eCLIP11.4□□□□□ -0.58
CNN3P1-201ENST00000401596 PCF11O94913 1555 aaKnown RBP11.4□□□□□ -0.58
CNN3P1-201ENST00000401596 CFAP43Q8NDM7 1665 aa11.39□□□□□ -0.59
CNN3P1-201ENST00000401596 SPATA31D1Q6ZQQ2 1576 aa11.38□□□□□ -0.59
CNN3P1-201ENST00000401596 APLP2Q06481 763 aa11.38□□□□□ -0.59
CNN3P1-201ENST00000401596 HRCP23327 699 aa11.37□□□□□ -0.59
CNN3P1-201ENST00000401596 KANK4Q5T7N3 995 aaPredicted RBP11.37□□□□□ -0.59
CNN3P1-201ENST00000401596 DISP1Q96F81 1524 aa11.36□□□□□ -0.59
CNN3P1-201ENST00000401596 SHROOM2Q13796 1616 aa11.36□□□□□ -0.59
CNN3P1-201ENST00000401596 LRRC9Q6ZRR7 1453 aa11.36□□□□□ -0.59
CNN3P1-201ENST00000401596 RRBP1Q9P2E9 1410 aaKnown RBP11.35□□□□□ -0.59
CNN3P1-201ENST00000401596 KIAA0556O60303 1618 aa11.35□□□□□ -0.59
CNN3P1-201ENST00000401596 ABCB7O75027 752 aa11.34□□□□□ -0.59
CNN3P1-201ENST00000401596 P3H3Q8IVL6 736 aa11.32□□□□□ -0.6
CNN3P1-201ENST00000401596 LRRIQ1Q96JM4 1722 aa11.31□□□□□ -0.6
CNN3P1-201ENST00000401596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.3□□□□□ -0.6
CNN3P1-201ENST00000401596 HNRNPUL2Q1KMD3 747 aaKnown RBP11.3□□□□□ -0.6
CNN3P1-201ENST00000401596 ZNF219Q9P2Y4 722 aaPredicted RBP11.3□□□□□ -0.6
CNN3P1-201ENST00000401596 ADCY10Q96PN6 1610 aa11.3□□□□□ -0.6
CNN3P1-201ENST00000401596 PPRC1Q5VV67 1664 aaKnown RBP11.29□□□□□ -0.6
CNN3P1-201ENST00000401596 PRG4Q92954 1404 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms