RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 MAPKBP1O60336 1514 aa15.13■□□□□ 0.01
PPP4R1-203ENST00000400556 TRIM52Q96A61 297 aa15.12■□□□□ 0.01
PPP4R1-203ENST00000400556 HMGXB3Q12766 1538 aa15.11■□□□□ 0.01
PPP4R1-203ENST00000400556 SETD5Q9C0A6 1442 aa15.11■□□□□ 0.01
PPP4R1-203ENST00000400556 FHOD3Q2V2M9 1422 aa15.1■□□□□ 0.01
PPP4R1-203ENST00000400556 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
PPP4R1-203ENST00000400556 FGD5Q6ZNL6 1462 aa15.1■□□□□ 0.01
PPP4R1-203ENST00000400556 FKBP8Q14318 412 aa15.1■□□□□ 0.01
PPP4R1-203ENST00000400556 TSHZ2Q9NRE2 1034 aa15.09■□□□□ 0.01
PPP4R1-203ENST00000400556 TIAM1Q13009 1591 aa15.08■□□□□ 0
PPP4R1-203ENST00000400556 LRRC9Q6ZRR7 1453 aa15.08■□□□□ 0
PPP4R1-203ENST00000400556 CADPSQ9ULU8 1353 aa15.05■□□□□ -0
PPP4R1-203ENST00000400556 RAD54L2Q9Y4B4 1467 aa15.04■□□□□ -0
PPP4R1-203ENST00000400556 MYT1Q01538 1121 aa15.01□□□□□ -0.01
PPP4R1-203ENST00000400556 ARID3CA6NKF2 412 aa15.01□□□□□ -0.01
PPP4R1-203ENST00000400556 PCF11O94913 1555 aaKnown RBP15□□□□□ -0.01
PPP4R1-203ENST00000400556 PPP1R15AO75807 674 aaPredicted RBP14.98□□□□□ -0.01
PPP4R1-203ENST00000400556 CHIC2Q9UKJ5 165 aa14.97□□□□□ -0.01
PPP4R1-203ENST00000400556 FHAD1B1AJZ9 1412 aa14.97□□□□□ -0.01
PPP4R1-203ENST00000400556 ANP32CO43423 234 aa14.96□□□□□ -0.01
PPP4R1-203ENST00000400556 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
PPP4R1-203ENST00000400556 IRX6P78412 446 aaPredicted RBP14.94□□□□□ -0.02
PPP4R1-203ENST00000400556 NESP48681 1621 aa14.94□□□□□ -0.02
PPP4R1-203ENST00000400556 FANCD2Q9BXW9 1451 aa14.94□□□□□ -0.02
PPP4R1-203ENST00000400556 RRP7BPQ9NSQ0 103 aa14.93□□□□□ -0.02
PPP4R1-203ENST00000400556 MTUS2Q5JR59 1369 aa14.93□□□□□ -0.02
PPP4R1-203ENST00000400556 NEFLP07196 543 aa14.92□□□□□ -0.02
PPP4R1-203ENST00000400556 TDRD9Q8NDG6 1382 aaKnown RBP14.91□□□□□ -0.02
PPP4R1-203ENST00000400556 CNGB1Q14028 1251 aaPredicted RBP14.89□□□□□ -0.03
PPP4R1-203ENST00000400556 PTPRKQ15262 1439 aa14.89□□□□□ -0.03
PPP4R1-203ENST00000400556 MAP3K1Q13233 1512 aa14.88□□□□□ -0.03
PPP4R1-203ENST00000400556 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
PPP4R1-203ENST00000400556 FOXD1Q16676 465 aa14.86□□□□□ -0.03
PPP4R1-203ENST00000400556 FGD6Q6ZV73 1430 aa14.86□□□□□ -0.03
PPP4R1-203ENST00000400556 HNRNPUQ00839 825 aaKnown RBP eCLIP14.86□□□□□ -0.03
PPP4R1-203ENST00000400556 CCDC18Q5T9S5 1454 aa14.85□□□□□ -0.03
PPP4R1-203ENST00000400556 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
PPP4R1-203ENST00000400556 CFAP43Q8NDM7 1665 aa14.84□□□□□ -0.03
PPP4R1-203ENST00000400556 CC2D2AQ9P2K1 1620 aa14.84□□□□□ -0.03
PPP4R1-203ENST00000400556 CASKIN1Q8WXD9 1431 aa14.83□□□□□ -0.03
PPP4R1-203ENST00000400556 PRDM2Q13029 1718 aa14.83□□□□□ -0.04
PPP4R1-203ENST00000400556 AQRO60306 1485 aaKnown RBP eCLIP14.83□□□□□ -0.043e-6■■■■□ 20.1
PPP4R1-203ENST00000400556 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
PPP4R1-203ENST00000400556 FYCO1Q9BQS8 1478 aa14.82□□□□□ -0.04
PPP4R1-203ENST00000400556 ANP32EQ9BTT0 268 aa14.81□□□□□ -0.04
PPP4R1-203ENST00000400556 SENP3-EIF4A1A0A087X0R7 540 aa14.8□□□□□ -0.04
PPP4R1-203ENST00000400556 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
PPP4R1-203ENST00000400556 RBM19Q9Y4C8 960 aaKnown RBP14.8□□□□□ -0.04
PPP4R1-203ENST00000400556 CCER2I3L3R5 266 aa14.79□□□□□ -0.04
PPP4R1-203ENST00000400556 CCDC184Q52MB2 194 aa14.78□□□□□ -0.04
PPP4R1-203ENST00000400556 HSPA5P11021 654 aaKnown RBP14.78□□□□□ -0.04
PPP4R1-203ENST00000400556 ABCA10Q8WWZ4 1543 aa14.77□□□□□ -0.04
PPP4R1-203ENST00000400556 FMN1Q68DA7 1419 aa14.77□□□□□ -0.04
PPP4R1-203ENST00000400556 NCOA2Q15596 1464 aa14.76□□□□□ -0.05
PPP4R1-203ENST00000400556 NAIPQ13075 1403 aa14.76□□□□□ -0.05
PPP4R1-203ENST00000400556 DNMBPQ6XZF7 1577 aa14.76□□□□□ -0.05
PPP4R1-203ENST00000400556 UACAQ9BZF9 1416 aa14.75□□□□□ -0.05
PPP4R1-203ENST00000400556 SNAPC4Q5SXM2 1469 aa14.74□□□□□ -0.05
PPP4R1-203ENST00000400556 WASHC2AQ641Q2 1341 aa14.74□□□□□ -0.05
PPP4R1-203ENST00000400556 FAM9BQ8IZU0 186 aa14.74□□□□□ -0.05
PPP4R1-203ENST00000400556 HFM1A2PYH4 1435 aa14.74□□□□□ -0.05
PPP4R1-203ENST00000400556 POLR3GLQ9BT43 218 aa14.73□□□□□ -0.05
PPP4R1-203ENST00000400556 PTPN23Q9H3S7 1636 aa14.72□□□□□ -0.05
PPP4R1-203ENST00000400556 EFCAB5A4FU69 1503 aa14.72□□□□□ -0.05
PPP4R1-203ENST00000400556 MYOM3Q5VTT5 1437 aa14.72□□□□□ -0.05
PPP4R1-203ENST00000400556 C11orf95C9JLR9 678 aaPredicted RBP14.71□□□□□ -0.05
PPP4R1-203ENST00000400556 URB2Q14146 1524 aaKnown RBP14.7□□□□□ -0.06
PPP4R1-203ENST00000400556 L3MBTL2Q969R5 705 aa14.7□□□□□ -0.06
PPP4R1-203ENST00000400556 CTTNBP2Q8WZ74 1663 aa14.7□□□□□ -0.06
PPP4R1-203ENST00000400556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.69□□□□□ -0.061e-18■■■■□ 20.3
PPP4R1-203ENST00000400556 LRRIQ1Q96JM4 1722 aa14.69□□□□□ -0.06
PPP4R1-203ENST00000400556 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
PPP4R1-203ENST00000400556 EIF4G2P78344 907 aaKnown RBP eCLIP14.67□□□□□ -0.06
PPP4R1-203ENST00000400556 ZNF326Q5BKZ1 582 aaKnown RBP14.67□□□□□ -0.06
PPP4R1-203ENST00000400556 MPHOSPH9Q99550 1183 aa14.67□□□□□ -0.06
PPP4R1-203ENST00000400556 MAGI3Q5TCQ9 1506 aa14.67□□□□□ -0.06
PPP4R1-203ENST00000400556 ZNF644Q9H582 1327 aaPredicted RBP14.66□□□□□ -0.06
PPP4R1-203ENST00000400556 CUL7Q14999 1698 aa14.65□□□□□ -0.06
PPP4R1-203ENST00000400556 KDM6BO15054 1643 aa14.65□□□□□ -0.07
PPP4R1-203ENST00000400556 GRIN2BQ13224 1484 aa14.64□□□□□ -0.07
PPP4R1-203ENST00000400556 MRS2Q9HD23 443 aa14.64□□□□□ -0.07
PPP4R1-203ENST00000400556 MSH5O43196 834 aa14.63□□□□□ -0.07
PPP4R1-203ENST00000400556 KDM5BQ9UGL1 1544 aa14.63□□□□□ -0.07
PPP4R1-203ENST00000400556 CDK13Q14004 1512 aaKnown RBP14.63□□□□□ -0.07
PPP4R1-203ENST00000400556 NBPF8Q3BBV2 869 aa14.63□□□□□ -0.07
PPP4R1-203ENST00000400556 DENND4BO75064 1496 aaPredicted RBP14.62□□□□□ -0.07
PPP4R1-203ENST00000400556 B4GALNT3Q6L9W6 998 aa14.61□□□□□ -0.07
PPP4R1-203ENST00000400556 SUPT6HQ7KZ85 1726 aaKnown RBP14.6□□□□□ -0.07
PPP4R1-203ENST00000400556 SLC4A1APQ9BWU0 796 aaKnown RBP14.59□□□□□ -0.07
PPP4R1-203ENST00000400556 ZNF777Q9ULD5 760 aaPredicted RBP14.59□□□□□ -0.07
PPP4R1-203ENST00000400556 CDK11AQ9UQ88 783 aaPredicted RBP14.59□□□□□ -0.07
PPP4R1-203ENST00000400556 SAMD9Q5K651 1589 aa14.58□□□□□ -0.08
PPP4R1-203ENST00000400556 PRKRIP1Q9H875 184 aaPredicted RBP14.58□□□□□ -0.08
PPP4R1-203ENST00000400556 EHBP1L1Q8N3D4 1523 aa14.57□□□□□ -0.08
PPP4R1-203ENST00000400556 UGGT2Q9NYU1 1516 aa14.57□□□□□ -0.08
PPP4R1-203ENST00000400556 LAMC3Q9Y6N6 1575 aa14.54□□□□□ -0.08
PPP4R1-203ENST00000400556 CCDC7Q96M83 1385 aa14.54□□□□□ -0.08
PPP4R1-203ENST00000400556 ABCA5Q8WWZ7 1642 aa14.54□□□□□ -0.08
PPP4R1-203ENST00000400556 EPRSP07814 1512 aaKnown RBP14.53□□□□□ -0.08
PPP4R1-203ENST00000400556 CNTLNQ9NXG0 1405 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms