RNA–Protein interactions for RNA: ENST00000396420.7

POMGNT1-203, Transcript of protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-), humanhuman

TSL 2 BASIC

Gene POMGNT1, Length 3,480 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POMGNT1-203ENST00000396420 RAPGEF2Q9Y4G8 1499 aa15.41■□□□□ 0.06
POMGNT1-203ENST00000396420 TNIKQ9UKE5 1360 aa15.41■□□□□ 0.06
POMGNT1-203ENST00000396420 CUX2O14529 1486 aa15.4■□□□□ 0.06
POMGNT1-203ENST00000396420 KIF27Q86VH2 1401 aa15.4■□□□□ 0.06
POMGNT1-203ENST00000396420 CEP164Q9UPV0 1460 aa15.39■□□□□ 0.05
POMGNT1-203ENST00000396420 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
POMGNT1-203ENST00000396420 FANCIQ9NVI1 1328 aa15.37■□□□□ 0.05
POMGNT1-203ENST00000396420 RAD54L2Q9Y4B4 1467 aa15.36■□□□□ 0.05
POMGNT1-203ENST00000396420 DDX10Q13206 875 aaKnown RBP15.35■□□□□ 0.05
POMGNT1-203ENST00000396420 BIVM-ERCC5R4GMW8 1640 aa15.35■□□□□ 0.05
POMGNT1-203ENST00000396420 RTL5Q5HYW3 569 aaPredicted RBP15.35■□□□□ 0.05
POMGNT1-203ENST00000396420 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
POMGNT1-203ENST00000396420 EIF5BO60841 1220 aaKnown RBP15.33■□□□□ 0.04
POMGNT1-203ENST00000396420 CLIP1P30622 1438 aa15.31■□□□□ 0.04
POMGNT1-203ENST00000396420 TDRD9Q8NDG6 1382 aaKnown RBP15.31■□□□□ 0.04
POMGNT1-203ENST00000396420 P3H3Q8IVL6 736 aa15.29■□□□□ 0.04
POMGNT1-203ENST00000396420 IL27Q8NEV9 243 aa15.29■□□□□ 0.04
POMGNT1-203ENST00000396420 TOPBP1Q92547 1522 aa15.29■□□□□ 0.04
POMGNT1-203ENST00000396420 IGF1RP08069 1367 aa15.28■□□□□ 0.04
POMGNT1-203ENST00000396420 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
POMGNT1-203ENST00000396420 ATP1B4Q9UN42 357 aaPredicted RBP15.27■□□□□ 0.04
POMGNT1-203ENST00000396420 POLA1P09884 1462 aaPredicted RBP15.26■□□□□ 0.03
POMGNT1-203ENST00000396420 CARMIL1Q5VZK9 1371 aa15.26■□□□□ 0.03
POMGNT1-203ENST00000396420 PRDM2Q13029 1718 aa15.25■□□□□ 0.03
POMGNT1-203ENST00000396420 ERICH6BQ5W0A0 696 aa15.25■□□□□ 0.03
POMGNT1-203ENST00000396420 URB2Q14146 1524 aaKnown RBP15.25■□□□□ 0.03
POMGNT1-203ENST00000396420 NOP58Q9Y2X3 529 aaKnown RBP15.24■□□□□ 0.03
POMGNT1-203ENST00000396420 KIF21BO75037 1637 aa15.22■□□□□ 0.03
POMGNT1-203ENST00000396420 PRXQ9BXM0 1461 aa15.22■□□□□ 0.03
POMGNT1-203ENST00000396420 ERCC6Q03468 1493 aa15.21■□□□□ 0.03
POMGNT1-203ENST00000396420 DNMBPQ6XZF7 1577 aa15.21■□□□□ 0.03
POMGNT1-203ENST00000396420 HIRIP3Q9BW71 556 aaPredicted RBP15.2■□□□□ 0.02
POMGNT1-203ENST00000396420 UBE2Q2Q8WVN8 375 aa15.19■□□□□ 0.02
POMGNT1-203ENST00000396420 KIF21AQ7Z4S6 1674 aa15.18■□□□□ 0.02
POMGNT1-203ENST00000396420 ANP32CO43423 234 aa15.18■□□□□ 0.02
POMGNT1-203ENST00000396420 PAK3O75914 559 aaPredicted RBP15.17■□□□□ 0.02
POMGNT1-203ENST00000396420 HNRNPUQ00839 825 aaKnown RBP eCLIP15.15■□□□□ 0.02
POMGNT1-203ENST00000396420 FBLN2P98095 1184 aa15.13■□□□□ 0.01
POMGNT1-203ENST00000396420 B4GALNT3Q6L9W6 998 aa15.12■□□□□ 0.01
POMGNT1-203ENST00000396420 AQRO60306 1485 aaKnown RBP eCLIP15.12■□□□□ 0.011e-6■■■□□ 15.3
POMGNT1-203ENST00000396420 DHX57Q6P158 1386 aaKnown RBP15.11■□□□□ 0.01
POMGNT1-203ENST00000396420 ABCA10Q8WWZ4 1543 aa15.1■□□□□ 0.01
POMGNT1-203ENST00000396420 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
POMGNT1-203ENST00000396420 VPS8Q8N3P4 1428 aa15.09■□□□□ 0.01
POMGNT1-203ENST00000396420 ANP32AP39687 249 aaKnown RBP15.09■□□□□ 0.01
POMGNT1-203ENST00000396420 ZBTB47Q9UFB7 747 aaPredicted RBP15.09■□□□□ 0.01
POMGNT1-203ENST00000396420 GAPVD1Q14C86 1478 aa15.08■□□□□ 0.01
POMGNT1-203ENST00000396420 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
POMGNT1-203ENST00000396420 KANK4Q5T7N3 995 aaPredicted RBP15.05■□□□□ 0
POMGNT1-203ENST00000396420 PPP4R2Q9NY27 417 aa15.05■□□□□ -0
POMGNT1-203ENST00000396420 ARAP1Q96P48 1450 aa15.05■□□□□ -0
POMGNT1-203ENST00000396420 ARID3CA6NKF2 412 aa15.02■□□□□ -0
POMGNT1-203ENST00000396420 NPM2Q86SE8 214 aaKnown RBP15.02■□□□□ -0
POMGNT1-203ENST00000396420 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
POMGNT1-203ENST00000396420 ZNF608Q9ULD9 1512 aaPredicted RBP15.01□□□□□ -0.01
POMGNT1-203ENST00000396420 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
POMGNT1-203ENST00000396420 CCER2I3L3R5 266 aa14.98□□□□□ -0.01
POMGNT1-203ENST00000396420 NEFMP07197 916 aa14.97□□□□□ -0.01
POMGNT1-203ENST00000396420 PKNOX2Q96KN3 472 aa14.97□□□□□ -0.01
POMGNT1-203ENST00000396420 FHOD3Q2V2M9 1422 aa14.97□□□□□ -0.01
POMGNT1-203ENST00000396420 CHMP7Q8WUX9 453 aaPredicted RBP14.97□□□□□ -0.01
POMGNT1-203ENST00000396420 IPO9Q96P70 1041 aaKnown RBP14.96□□□□□ -0.02
POMGNT1-203ENST00000396420 TIMELESSQ9UNS1 1208 aa14.96□□□□□ -0.02
POMGNT1-203ENST00000396420 SIN3AQ96ST3 1273 aa14.93□□□□□ -0.02
POMGNT1-203ENST00000396420 PPP1R15AO75807 674 aaPredicted RBP14.91□□□□□ -0.02
POMGNT1-203ENST00000396420 BRPF3Q9ULD4 1205 aa14.91□□□□□ -0.02
POMGNT1-203ENST00000396420 TARBP1Q13395 1621 aaKnown RBP14.91□□□□□ -0.02
POMGNT1-203ENST00000396420 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
POMGNT1-203ENST00000396420 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
POMGNT1-203ENST00000396420 GRIN2BQ13224 1484 aa14.87□□□□□ -0.03
POMGNT1-203ENST00000396420 FAM9BQ8IZU0 186 aa14.87□□□□□ -0.03
POMGNT1-203ENST00000396420 WDR62O43379 1518 aa14.87□□□□□ -0.03
POMGNT1-203ENST00000396420 CUL7Q14999 1698 aa14.86□□□□□ -0.03
POMGNT1-203ENST00000396420 FAM50AQ14320 339 aaKnown RBP14.86□□□□□ -0.03
POMGNT1-203ENST00000396420 WDR97A6NE52 1622 aa14.86□□□□□ -0.03
POMGNT1-203ENST00000396420 FHAD1B1AJZ9 1412 aa14.85□□□□□ -0.03
POMGNT1-203ENST00000396420 SNAPC4Q5SXM2 1469 aa14.84□□□□□ -0.03
POMGNT1-203ENST00000396420 CNGB1Q14028 1251 aaPredicted RBP14.83□□□□□ -0.04
POMGNT1-203ENST00000396420 GLIPR1L2Q4G1C9 344 aa14.8□□□□□ -0.04
POMGNT1-203ENST00000396420 THOC2Q8NI27 1593 aaKnown RBP14.78□□□□□ -0.04
POMGNT1-203ENST00000396420 SENP3-EIF4A1A0A087X0R7 540 aa14.78□□□□□ -0.04
POMGNT1-203ENST00000396420 VSIG10Q8N0Z9 540 aa14.78□□□□□ -0.04
POMGNT1-203ENST00000396420 PBRM1Q86U86 1689 aa14.77□□□□□ -0.04
POMGNT1-203ENST00000396420 EIF4G3O43432 1585 aaKnown RBP14.77□□□□□ -0.05
POMGNT1-203ENST00000396420 MTUS2Q5JR59 1369 aa14.75□□□□□ -0.05
POMGNT1-203ENST00000396420 FMN1Q68DA7 1419 aa14.75□□□□□ -0.05
POMGNT1-203ENST00000396420 CTTNBP2Q8WZ74 1663 aa14.74□□□□□ -0.05
POMGNT1-203ENST00000396420 PCF11O94913 1555 aaKnown RBP14.73□□□□□ -0.05
POMGNT1-203ENST00000396420 ADAMTS12P58397 1594 aa14.73□□□□□ -0.05
POMGNT1-203ENST00000396420 WASHC2AQ641Q2 1341 aa14.73□□□□□ -0.05
POMGNT1-203ENST00000396420 RAB3GAP2Q9H2M9 1393 aa14.72□□□□□ -0.05
POMGNT1-203ENST00000396420 PPM1GO15355 546 aaPredicted RBP14.72□□□□□ -0.05
POMGNT1-203ENST00000396420 JPH4Q96JJ6 628 aa14.72□□□□□ -0.05
POMGNT1-203ENST00000396420 USP35Q9P2H5 1018 aa14.72□□□□□ -0.05
POMGNT1-203ENST00000396420 DAXXQ9UER7 740 aaPredicted RBP14.72□□□□□ -0.05
POMGNT1-203ENST00000396420 GSE1Q14687 1217 aa14.72□□□□□ -0.05
POMGNT1-203ENST00000396420 CCNB3Q8WWL7 1395 aa14.71□□□□□ -0.05
POMGNT1-203ENST00000396420 RSPH6AQ9H0K4 717 aa14.71□□□□□ -0.05
POMGNT1-203ENST00000396420 GRIN2AQ12879 1464 aa14.71□□□□□ -0.06
POMGNT1-203ENST00000396420 MRS2Q9HD23 443 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms