RNA–Protein interactions for RNA: ENST00000377938.2

GKN1-201, Transcript of gastrokine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GKN1, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1-201ENST00000377938 FANCD2Q9BXW9 1451 aa9.72□□□□□ -0.85
GKN1-201ENST00000377938 FXR2P51116 673 aaKnown RBP eCLIP9.72□□□□□ -0.85
GKN1-201ENST00000377938 CSRNP3Q8WYN3 585 aa9.71□□□□□ -0.86
GKN1-201ENST00000377938 CEP164Q9UPV0 1460 aa9.7□□□□□ -0.86
GKN1-201ENST00000377938 NESP48681 1621 aa9.7□□□□□ -0.86
GKN1-201ENST00000377938 TOP2BQ02880 1626 aa9.7□□□□□ -0.86
GKN1-201ENST00000377938 BIVM-ERCC5R4GMW8 1640 aa9.7□□□□□ -0.86
GKN1-201ENST00000377938 SYNJ1O43426 1573 aa9.69□□□□□ -0.86
GKN1-201ENST00000377938 MKRN4PQ13434 485 aaPredicted RBP9.67□□□□□ -0.86
GKN1-201ENST00000377938 HAX1O00165 279 aa9.66□□□□□ -0.86
GKN1-201ENST00000377938 CUX1P39880 1505 aa9.66□□□□□ -0.86
GKN1-201ENST00000377938 EEA1Q15075 1411 aa9.65□□□□□ -0.86
GKN1-201ENST00000377938 DNMBPQ6XZF7 1577 aa9.64□□□□□ -0.87
GKN1-201ENST00000377938 SPDYE1Q8NFV5 336 aaPredicted RBP9.64□□□□□ -0.87
GKN1-201ENST00000377938 ZNF692Q9BU19 519 aaPredicted RBP9.63□□□□□ -0.87
GKN1-201ENST00000377938 SSUH2Q9Y2M2 353 aa9.63□□□□□ -0.87
GKN1-201ENST00000377938 KIF21AQ7Z4S6 1674 aa9.62□□□□□ -0.87
GKN1-201ENST00000377938 CLEC11AQ9Y240 323 aa9.61□□□□□ -0.87
GKN1-201ENST00000377938 TOPBP1Q92547 1522 aa9.61□□□□□ -0.87
GKN1-201ENST00000377938 MRC2Q9UBG0 1479 aa9.6□□□□□ -0.87
GKN1-201ENST00000377938 ERCC6Q03468 1493 aa9.59□□□□□ -0.87
GKN1-201ENST00000377938 EVX2Q03828 476 aa9.59□□□□□ -0.87
GKN1-201ENST00000377938 URB2Q14146 1524 aaKnown RBP9.58□□□□□ -0.88
GKN1-201ENST00000377938 FGD5Q6ZNL6 1462 aa9.58□□□□□ -0.88
GKN1-201ENST00000377938 PRKAR2AP13861 404 aaKnown RBP9.56□□□□□ -0.88
GKN1-201ENST00000377938 KIF27Q86VH2 1401 aa9.56□□□□□ -0.88
GKN1-201ENST00000377938 WDR62O43379 1518 aa9.55□□□□□ -0.88
GKN1-201ENST00000377938 SOGA1O94964 1423 aa9.55□□□□□ -0.88
GKN1-201ENST00000377938 POLA1P09884 1462 aaPredicted RBP9.54□□□□□ -0.88
GKN1-201ENST00000377938 FAM9AQ8IZU1 332 aaPredicted RBP9.53□□□□□ -0.88
GKN1-201ENST00000377938 ABCA10Q8WWZ4 1543 aa9.52□□□□□ -0.88
GKN1-201ENST00000377938 THOC2Q8NI27 1593 aaKnown RBP9.51□□□□□ -0.89
GKN1-201ENST00000377938 CUX2O14529 1486 aa9.5□□□□□ -0.89
GKN1-201ENST00000377938 KIF21BO75037 1637 aa9.49□□□□□ -0.89
GKN1-201ENST00000377938 WDR97A6NE52 1622 aa9.49□□□□□ -0.89
GKN1-201ENST00000377938 RUSC2Q8N2Y8 1516 aa9.48□□□□□ -0.89
GKN1-201ENST00000377938 IFT140Q96RY7 1462 aa9.47□□□□□ -0.89
GKN1-201ENST00000377938 GOLGA3Q08378 1498 aa9.47□□□□□ -0.89
GKN1-201ENST00000377938 RAD54L2Q9Y4B4 1467 aa9.47□□□□□ -0.89
GKN1-201ENST00000377938 TARBP1Q13395 1621 aaKnown RBP9.46□□□□□ -0.89
GKN1-201ENST00000377938 ERICH3Q5RHP9 1530 aa9.46□□□□□ -0.9
GKN1-201ENST00000377938 PRR29P0C7W0 189 aa9.44□□□□□ -0.9
GKN1-201ENST00000377938 ABCA5Q8WWZ7 1642 aa9.44□□□□□ -0.9
GKN1-201ENST00000377938 CUL7Q14999 1698 aa9.43□□□□□ -0.9
GKN1-201ENST00000377938 PRXQ9BXM0 1461 aa9.43□□□□□ -0.9
GKN1-201ENST00000377938 LOC105371045A0A1W2PR82 267 aa9.43□□□□□ -0.9
GKN1-201ENST00000377938 GAPVD1Q14C86 1478 aa9.42□□□□□ -0.9
GKN1-201ENST00000377938 IGF1RP08069 1367 aa9.42□□□□□ -0.9
GKN1-201ENST00000377938 TNIKQ9UKE5 1360 aa9.41□□□□□ -0.9
GKN1-201ENST00000377938 C19orf67A6NJJ6 358 aa9.41□□□□□ -0.9
GKN1-201ENST00000377938 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
GKN1-201ENST00000377938 RAPGEF2Q9Y4G8 1499 aa9.4□□□□□ -0.91
GKN1-201ENST00000377938 CARMIL1Q5VZK9 1371 aa9.39□□□□□ -0.91
GKN1-201ENST00000377938 TDRD9Q8NDG6 1382 aaKnown RBP9.39□□□□□ -0.91
GKN1-201ENST00000377938 GRIN2BQ13224 1484 aa9.39□□□□□ -0.91
GKN1-201ENST00000377938 UBTFP17480 764 aaKnown RBP9.38□□□□□ -0.91
GKN1-201ENST00000377938 PBRM1Q86U86 1689 aa9.38□□□□□ -0.91
GKN1-201ENST00000377938 EIF4G3O43432 1585 aaKnown RBP9.36□□□□□ -0.91
GKN1-201ENST00000377938 AQRO60306 1485 aaKnown RBP eCLIP9.34□□□□□ -0.91
GKN1-201ENST00000377938 FHAD1B1AJZ9 1412 aa9.34□□□□□ -0.91
GKN1-201ENST00000377938 ZNF608Q9ULD9 1512 aaPredicted RBP9.34□□□□□ -0.91
GKN1-201ENST00000377938 CEP162Q5TB80 1403 aa9.33□□□□□ -0.92
GKN1-201ENST00000377938 MAGI1Q96QZ7 1491 aaPredicted RBP9.33□□□□□ -0.92
GKN1-201ENST00000377938 ADAMTS12P58397 1594 aa9.33□□□□□ -0.92
GKN1-201ENST00000377938 CLIP1P30622 1438 aa9.3□□□□□ -0.92
GKN1-201ENST00000377938 SNAPC4Q5SXM2 1469 aa9.29□□□□□ -0.92
GKN1-201ENST00000377938 GABBR2O75899 941 aa9.29□□□□□ -0.92
GKN1-201ENST00000377938 LHX8Q68G74 356 aa9.29□□□□□ -0.92
GKN1-201ENST00000377938 FARP1Q9Y4F1 1045 aaPredicted RBP9.28□□□□□ -0.92
GKN1-201ENST00000377938 CTTNBP2Q8WZ74 1663 aa9.28□□□□□ -0.92
GKN1-201ENST00000377938 SYNJ2O15056 1496 aa9.28□□□□□ -0.92
GKN1-201ENST00000377938 CD44P16070 742 aaKnown RBP9.27□□□□□ -0.93
GKN1-201ENST00000377938 GRIN2AQ12879 1464 aa9.25□□□□□ -0.93
GKN1-201ENST00000377938 EFCAB5A4FU69 1503 aa9.25□□□□□ -0.93
GKN1-201ENST00000377938 STAG3Q9UJ98 1225 aa9.24□□□□□ -0.93
GKN1-201ENST00000377938 CHMP7Q8WUX9 453 aaPredicted RBP9.23□□□□□ -0.93
GKN1-201ENST00000377938 IQGAP2Q13576 1575 aa9.22□□□□□ -0.93
GKN1-201ENST00000377938 SPDYE4A6NLX3 237 aa9.22□□□□□ -0.93
GKN1-201ENST00000377938 VPS8Q8N3P4 1428 aa9.21□□□□□ -0.94
GKN1-201ENST00000377938 KIAA0586Q9BVV6 1533 aa9.21□□□□□ -0.94
GKN1-201ENST00000377938 NUP160Q12769 1436 aa9.2□□□□□ -0.94
GKN1-201ENST00000377938 ARHGAP35Q9NRY4 1499 aa9.2□□□□□ -0.94
GKN1-201ENST00000377938 RANGAP1P46060 587 aaPredicted RBP9.18□□□□□ -0.94
GKN1-201ENST00000377938 CLCN6P51797 869 aa9.18□□□□□ -0.94
GKN1-201ENST00000377938 ARAP1Q96P48 1450 aa9.18□□□□□ -0.94
GKN1-201ENST00000377938 SAMD9Q5K651 1589 aa9.17□□□□□ -0.94
GKN1-201ENST00000377938 UGGT2Q9NYU1 1516 aa9.17□□□□□ -0.94
GKN1-201ENST00000377938 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
GKN1-201ENST00000377938 CHD1O14646 1710 aa9.16□□□□□ -0.94
GKN1-201ENST00000377938 FMN1Q68DA7 1419 aa9.15□□□□□ -0.94
GKN1-201ENST00000377938 CREBZFQ9NS37 354 aa9.15□□□□□ -0.94
GKN1-201ENST00000377938 POTEIP0CG38 1075 aa9.13□□□□□ -0.95
GKN1-201ENST00000377938 CARMIL2Q6F5E8 1435 aa9.13□□□□□ -0.95
GKN1-201ENST00000377938 ZNF579Q8NAF0 562 aaKnown RBP9.12□□□□□ -0.95
GKN1-201ENST00000377938 FYCO1Q9BQS8 1478 aa9.12□□□□□ -0.95
GKN1-201ENST00000377938 FHOD3Q2V2M9 1422 aa9.12□□□□□ -0.95
GKN1-201ENST00000377938 ZRANB1Q9UGI0 708 aa9.11□□□□□ -0.95
GKN1-201ENST00000377938 KIAA0556O60303 1618 aa9.11□□□□□ -0.95
GKN1-201ENST00000377938 MAP3K1Q13233 1512 aa9.1□□□□□ -0.95
GKN1-201ENST00000377938 CASKIN1Q8WXD9 1431 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms