RNA–Protein interactions for RNA: ENST00000377938.2

GKN1-201, Transcript of gastrokine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GKN1, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1-201ENST00000377938 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
GKN1-201ENST00000377938 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
GKN1-201ENST00000377938 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
GKN1-201ENST00000377938 PHF23Q9BUL5 403 aaPredicted RBP15.17■□□□□ 0.02
GKN1-201ENST00000377938 FOXD1Q16676 465 aa14.34□□□□□ -0.11
GKN1-201ENST00000377938 POTEDQ86YR6 584 aa13.88□□□□□ -0.19
GKN1-201ENST00000377938 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
GKN1-201ENST00000377938 MSH5O43196 834 aa13.54□□□□□ -0.24
GKN1-201ENST00000377938 PIAS4Q8N2W9 510 aaPredicted RBP13.43□□□□□ -0.26
GKN1-201ENST00000377938 NISCHQ9Y2I1 1504 aa13.4□□□□□ -0.26
GKN1-201ENST00000377938 PPP6R1Q9UPN7 881 aa13.29□□□□□ -0.28
GKN1-201ENST00000377938 ADRA2BP18089 450 aa13.27□□□□□ -0.29
GKN1-201ENST00000377938 SCAF1Q9H7N4 1312 aaKnown RBP12.23□□□□□ -0.45
GKN1-201ENST00000377938 DMRT2Q9Y5R5 561 aa12.22□□□□□ -0.45
GKN1-201ENST00000377938 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
GKN1-201ENST00000377938 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
GKN1-201ENST00000377938 CACNB1Q02641 598 aaPredicted RBP11.81□□□□□ -0.52
GKN1-201ENST00000377938 CCDC180Q9P1Z9 1646 aa11.79□□□□□ -0.52
GKN1-201ENST00000377938 DCAF8L1A6NGE4 600 aa11.73□□□□□ -0.53
GKN1-201ENST00000377938 HOXD11P31277 338 aaPredicted RBP11.72□□□□□ -0.53
GKN1-201ENST00000377938 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.53
GKN1-201ENST00000377938 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
GKN1-201ENST00000377938 RNF39Q9H2S5 420 aa11.5□□□□□ -0.57
GKN1-201ENST00000377938 NCBP3Q53F19 620 aaKnown RBP11.46□□□□□ -0.57
GKN1-201ENST00000377938 DNAJC5BQ9UF47 199 aa11.37□□□□□ -0.59
GKN1-201ENST00000377938 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
GKN1-201ENST00000377938 ZCCHC6Q5VYS8 1495 aaKnown RBP11.25□□□□□ -0.61
GKN1-201ENST00000377938 NPM3O75607 178 aaKnown RBP11.24□□□□□ -0.61
GKN1-201ENST00000377938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.19□□□□□ -0.62
GKN1-201ENST00000377938 DCAF1Q9Y4B6 1507 aa11.15□□□□□ -0.62
GKN1-201ENST00000377938 ABCC9O60706 1549 aa11.1□□□□□ -0.63
GKN1-201ENST00000377938 MYO15BQ96JP2 1530 aa11.07□□□□□ -0.64
GKN1-201ENST00000377938 DCAF8L2P0C7V8 631 aa11.01□□□□□ -0.65
GKN1-201ENST00000377938 NACADO15069 1562 aa11□□□□□ -0.65
GKN1-201ENST00000377938 KCNA4P22459 653 aa10.94□□□□□ -0.66
GKN1-201ENST00000377938 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
GKN1-201ENST00000377938 RB1CC1Q8TDY2 1594 aa10.91□□□□□ -0.66
GKN1-201ENST00000377938 CAPN15O75808 1086 aa10.8□□□□□ -0.68
GKN1-201ENST00000377938 SHROOM4Q9ULL8 1493 aa10.77□□□□□ -0.69
GKN1-201ENST00000377938 POTEHQ6S545 545 aa10.77□□□□□ -0.69
GKN1-201ENST00000377938 SPINK5Q9NQ38 1064 aaPredicted RBP10.77□□□□□ -0.69
GKN1-201ENST00000377938 SCRIBQ14160 1630 aa10.74□□□□□ -0.69
GKN1-201ENST00000377938 SLC4A2P04920 1241 aa10.73□□□□□ -0.69
GKN1-201ENST00000377938 DSG3P32926 999 aa10.73□□□□□ -0.69
GKN1-201ENST00000377938 APLP2Q06481 763 aa10.71□□□□□ -0.69
GKN1-201ENST00000377938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.66□□□□□ -0.7
GKN1-201ENST00000377938 HNRNPUL2Q1KMD3 747 aaKnown RBP10.66□□□□□ -0.7
GKN1-201ENST00000377938 ZNF219Q9P2Y4 722 aaPredicted RBP10.62□□□□□ -0.71
GKN1-201ENST00000377938 UNC13AQ9UPW8 1703 aa10.59□□□□□ -0.71
GKN1-201ENST00000377938 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
GKN1-201ENST00000377938 SAMD1Q6SPF0 538 aaPredicted RBP10.58□□□□□ -0.72
GKN1-201ENST00000377938 ABCB7O75027 752 aa10.52□□□□□ -0.73
GKN1-201ENST00000377938 BICRAQ9NZM4 1560 aa10.5□□□□□ -0.73
GKN1-201ENST00000377938 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
GKN1-201ENST00000377938 PABPN1Q86U42 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
GKN1-201ENST00000377938 BAZ1AQ9NRL2 1556 aaPredicted RBP10.39□□□□□ -0.75
GKN1-201ENST00000377938 CECR2Q9BXF3 1484 aa10.35□□□□□ -0.75
GKN1-201ENST00000377938 RSF1Q96T23 1441 aaPredicted RBP10.34□□□□□ -0.75
GKN1-201ENST00000377938 SUPT5HO00267 1087 aaKnown RBP10.34□□□□□ -0.75
GKN1-201ENST00000377938 SLC4A1APQ9BWU0 796 aaKnown RBP10.34□□□□□ -0.75
GKN1-201ENST00000377938 SMARCA4P51532 1647 aa10.33□□□□□ -0.76
GKN1-201ENST00000377938 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
GKN1-201ENST00000377938 MROH2BQ7Z745 1585 aa10.31□□□□□ -0.76
GKN1-201ENST00000377938 FOXD4L1Q9NU39 408 aa10.28□□□□□ -0.76
GKN1-201ENST00000377938 POLA2Q14181 598 aa10.27□□□□□ -0.77
GKN1-201ENST00000377938 PEG3Q9GZU2 1588 aa10.23□□□□□ -0.77
GKN1-201ENST00000377938 EIF4G1Q04637 1599 aaKnown RBP10.22□□□□□ -0.77
GKN1-201ENST00000377938 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
GKN1-201ENST00000377938 WIZO95785 1651 aa10.21□□□□□ -0.78
GKN1-201ENST00000377938 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
GKN1-201ENST00000377938 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
GKN1-201ENST00000377938 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.78
GKN1-201ENST00000377938 BAZ1BQ9UIG0 1483 aaKnown RBP10.13□□□□□ -0.79
GKN1-201ENST00000377938 HMGXB3Q12766 1538 aa10.12□□□□□ -0.79
GKN1-201ENST00000377938 ATF5Q9Y2D1 282 aaPredicted RBP10.12□□□□□ -0.79
GKN1-201ENST00000377938 NCAPD3P42695 1498 aa10.11□□□□□ -0.79
GKN1-201ENST00000377938 CHRDL2Q6WN34 429 aa10.08□□□□□ -0.8
GKN1-201ENST00000377938 CC2D2AQ9P2K1 1620 aa10.07□□□□□ -0.8
GKN1-201ENST00000377938 ZBTB22O15209 634 aa10.03□□□□□ -0.8
GKN1-201ENST00000377938 AKT1S1Q96B36 256 aa10.02□□□□□ -0.81
GKN1-201ENST00000377938 CCDC88BA6NC98 1476 aa10.02□□□□□ -0.81
GKN1-201ENST00000377938 OSCARQ8IYS5 282 aa9.99□□□□□ -0.81
GKN1-201ENST00000377938 ATXN8OSP0DMR3 200 aa9.97□□□□□ -0.81
GKN1-201ENST00000377938 REM2Q8IYK8 340 aaPredicted RBP9.9□□□□□ -0.82
GKN1-201ENST00000377938 SP7Q8TDD2 431 aaPredicted RBP9.9□□□□□ -0.82
GKN1-201ENST00000377938 CFTRP13569 1480 aa9.86□□□□□ -0.83
GKN1-201ENST00000377938 FBLN2P98095 1184 aa9.84□□□□□ -0.83
GKN1-201ENST00000377938 CADPSQ9ULU8 1353 aa9.84□□□□□ -0.83
GKN1-201ENST00000377938 PRDM2Q13029 1718 aa9.84□□□□□ -0.83
GKN1-201ENST00000377938 LAMC3Q9Y6N6 1575 aa9.81□□□□□ -0.84
GKN1-201ENST00000377938 PITPNM1O00562 1244 aa9.81□□□□□ -0.84
GKN1-201ENST00000377938 PIP4P2Q8N4L2 257 aa9.8□□□□□ -0.84
GKN1-201ENST00000377938 TRIM41Q8WV44 630 aa9.79□□□□□ -0.84
GKN1-201ENST00000377938 SPDYE2BA6NHP3 402 aa9.78□□□□□ -0.84
GKN1-201ENST00000377938 SPDYE6P0CI01 402 aa9.78□□□□□ -0.84
GKN1-201ENST00000377938 SPDYE2Q495Y8 402 aa9.78□□□□□ -0.84
GKN1-201ENST00000377938 EHMT2Q96KQ7 1210 aa9.77□□□□□ -0.85
GKN1-201ENST00000377938 WRNQ14191 1432 aaPredicted RBP eCLIP9.76□□□□□ -0.85
GKN1-201ENST00000377938 ABCC8Q09428 1581 aa9.75□□□□□ -0.85
GKN1-201ENST00000377938 PDS5BQ9NTI5 1447 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms