RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 P3H3Q8IVL6 736 aa25.8■■□□□ 1.72
GNE-201ENST00000377902 PHLDB1Q86UU1 1377 aa25.79■■□□□ 1.72
GNE-201ENST00000377902 SETD5Q9C0A6 1442 aa25.78■■□□□ 1.72
GNE-201ENST00000377902 TIAM1Q13009 1591 aa25.78■■□□□ 1.72
GNE-201ENST00000377902 WDR97A6NE52 1622 aa25.77■■□□□ 1.72
GNE-201ENST00000377902 ATP1B4Q9UN42 357 aaPredicted RBP25.77■■□□□ 1.72
GNE-201ENST00000377902 LRRC9Q6ZRR7 1453 aa25.72■■□□□ 1.71
GNE-201ENST00000377902 CARMIL1Q5VZK9 1371 aa25.71■■□□□ 1.71
GNE-201ENST00000377902 FKBP8Q14318 412 aa25.68■■□□□ 1.7
GNE-201ENST00000377902 PPP1R15AO75807 674 aaPredicted RBP25.64■■□□□ 1.7
GNE-201ENST00000377902 MAP3K1Q13233 1512 aa25.63■■□□□ 1.69
GNE-201ENST00000377902 TRIM52Q96A61 297 aa25.6■■□□□ 1.69
GNE-201ENST00000377902 FGD5Q6ZNL6 1462 aa25.59■■□□□ 1.69
GNE-201ENST00000377902 PCF11O94913 1555 aaKnown RBP25.56■■□□□ 1.68
GNE-201ENST00000377902 FHOD3Q2V2M9 1422 aa25.54■■□□□ 1.68
GNE-201ENST00000377902 FHAD1B1AJZ9 1412 aa25.52■■□□□ 1.68
GNE-201ENST00000377902 ANP32EQ9BTT0 268 aa25.51■■□□□ 1.67
GNE-201ENST00000377902 CADPSQ9ULU8 1353 aa25.5■■□□□ 1.67
GNE-201ENST00000377902 PRDM2Q13029 1718 aa25.47■■□□□ 1.67
GNE-201ENST00000377902 CFAP43Q8NDM7 1665 aa25.47■■□□□ 1.67
GNE-201ENST00000377902 ANP32CO43423 234 aa25.46■■□□□ 1.67
GNE-201ENST00000377902 TIMELESSQ9UNS1 1208 aa25.43■■□□□ 1.66
GNE-201ENST00000377902 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
GNE-201ENST00000377902 CCER2I3L3R5 266 aa25.39■■□□□ 1.66
GNE-201ENST00000377902 NEFLP07196 543 aa25.39■■□□□ 1.66
GNE-201ENST00000377902 TONSLQ96HA7 1378 aa25.36■■□□□ 1.65
GNE-201ENST00000377902 RBM19Q9Y4C8 960 aaKnown RBP25.34■■□□□ 1.65
GNE-201ENST00000377902 PTPRKQ15262 1439 aa25.34■■□□□ 1.65
GNE-201ENST00000377902 FYCO1Q9BQS8 1478 aa25.33■■□□□ 1.65
GNE-201ENST00000377902 CASKIN1Q8WXD9 1431 aa25.32■■□□□ 1.64
GNE-201ENST00000377902 FGD6Q6ZV73 1430 aa25.31■■□□□ 1.64
GNE-201ENST00000377902 CCDC18Q5T9S5 1454 aa25.3■■□□□ 1.64
GNE-201ENST00000377902 FANCD2Q9BXW9 1451 aa25.29■■□□□ 1.64
GNE-201ENST00000377902 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.27■■□□□ 1.64
GNE-201ENST00000377902 MTUS2Q5JR59 1369 aa25.24■■□□□ 1.63
GNE-201ENST00000377902 IRX6P78412 446 aaPredicted RBP25.23■■□□□ 1.63
GNE-201ENST00000377902 AQRO60306 1485 aaKnown RBP eCLIP25.22■■□□□ 1.638e-8■■■■■ 39.5
GNE-201ENST00000377902 POLA1P09884 1462 aaPredicted RBP25.21■■□□□ 1.63
GNE-201ENST00000377902 EFCAB5A4FU69 1503 aa25.21■■□□□ 1.63
GNE-201ENST00000377902 UACAQ9BZF9 1416 aa25.2■■□□□ 1.63
GNE-201ENST00000377902 HFM1A2PYH4 1435 aa25.19■■□□□ 1.62
GNE-201ENST00000377902 HNRNPUQ00839 825 aaKnown RBP eCLIP25.19■■□□□ 1.62
GNE-201ENST00000377902 ABCA10Q8WWZ4 1543 aa25.19■■□□□ 1.62
GNE-201ENST00000377902 SNAPC4Q5SXM2 1469 aa25.18■■□□□ 1.62
GNE-201ENST00000377902 PTPN23Q9H3S7 1636 aa25.18■■□□□ 1.62
GNE-201ENST00000377902 NAIPQ13075 1403 aa25.17■■□□□ 1.62
GNE-201ENST00000377902 FMN1Q68DA7 1419 aa25.16■■□□□ 1.62
GNE-201ENST00000377902 TOPBP1Q92547 1522 aa25.15■■□□□ 1.62
GNE-201ENST00000377902 RRP7BPQ9NSQ0 103 aa25.15■■□□□ 1.62
GNE-201ENST00000377902 CHIC2Q9UKJ5 165 aa25.14■■□□□ 1.62
GNE-201ENST00000377902 NESP48681 1621 aa25.14■■□□□ 1.61
GNE-201ENST00000377902 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
GNE-201ENST00000377902 CTTNBP2Q8WZ74 1663 aa25.13■■□□□ 1.61
GNE-201ENST00000377902 KDM5BQ9UGL1 1544 aa25.12■■□□□ 1.61
GNE-201ENST00000377902 LRRIQ1Q96JM4 1722 aa25.12■■□□□ 1.61
GNE-201ENST00000377902 NCOA2Q15596 1464 aa25.11■■□□□ 1.61
GNE-201ENST00000377902 WASHC2AQ641Q2 1341 aa25.1■■□□□ 1.61
GNE-201ENST00000377902 HSPA5P11021 654 aaKnown RBP25.09■■□□□ 1.61
GNE-201ENST00000377902 MSH5O43196 834 aa25.08■■□□□ 1.61
GNE-201ENST00000377902 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.61
GNE-201ENST00000377902 MYOM3Q5VTT5 1437 aa25.08■■□□□ 1.6
GNE-201ENST00000377902 CCDC184Q52MB2 194 aa25.07■■□□□ 1.6
GNE-201ENST00000377902 TDRD9Q8NDG6 1382 aaKnown RBP25.07■■□□□ 1.6
GNE-201ENST00000377902 CUL7Q14999 1698 aa25.06■■□□□ 1.6
GNE-201ENST00000377902 FOXD1Q16676 465 aa25.01■■□□□ 1.6
GNE-201ENST00000377902 GRIN2BQ13224 1484 aa25■■□□□ 1.59
GNE-201ENST00000377902 DENND4BO75064 1496 aaPredicted RBP25■■□□□ 1.59
GNE-201ENST00000377902 C11orf95C9JLR9 678 aaPredicted RBP24.98■■□□□ 1.59
GNE-201ENST00000377902 MAGI3Q5TCQ9 1506 aa24.97■■□□□ 1.59
GNE-201ENST00000377902 ARID3CA6NKF2 412 aa24.97■■□□□ 1.59
GNE-201ENST00000377902 BCL11AQ9H165 835 aa24.96■■□□□ 1.59
GNE-201ENST00000377902 SAMD9Q5K651 1589 aa24.96■■□□□ 1.59
GNE-201ENST00000377902 SUPT6HQ7KZ85 1726 aaKnown RBP24.95■■□□□ 1.58
GNE-201ENST00000377902 KDM6BO15054 1643 aa24.94■■□□□ 1.58
GNE-201ENST00000377902 EIF4G2P78344 907 aaKnown RBP eCLIP24.94■■□□□ 1.58
GNE-201ENST00000377902 L3MBTL2Q969R5 705 aa24.93■■□□□ 1.58
GNE-201ENST00000377902 URB2Q14146 1524 aaKnown RBP24.92■■□□□ 1.58
GNE-201ENST00000377902 FAM9BQ8IZU0 186 aa24.92■■□□□ 1.58
GNE-201ENST00000377902 CDK11AQ9UQ88 783 aaPredicted RBP24.92■■□□□ 1.58
GNE-201ENST00000377902 UGGT2Q9NYU1 1516 aa24.9■■□□□ 1.58
GNE-201ENST00000377902 MPHOSPH9Q99550 1183 aa24.9■■□□□ 1.58
GNE-201ENST00000377902 EHBP1L1Q8N3D4 1523 aa24.9■■□□□ 1.58
GNE-201ENST00000377902 GAPVD1Q14C86 1478 aa24.87■■□□□ 1.57
GNE-201ENST00000377902 CNTLNQ9NXG0 1405 aa24.85■■□□□ 1.57
GNE-201ENST00000377902 ARHGEF11O15085 1522 aa24.84■■□□□ 1.57
GNE-201ENST00000377902 PRKRIP1Q9H875 184 aaPredicted RBP24.84■■□□□ 1.57
GNE-201ENST00000377902 NBPF8Q3BBV2 869 aa24.83■■□□□ 1.56
GNE-201ENST00000377902 MRS2Q9HD23 443 aa24.82■■□□□ 1.56
GNE-201ENST00000377902 ABCA5Q8WWZ7 1642 aa24.82■■□□□ 1.56
GNE-201ENST00000377902 B4GALNT3Q6L9W6 998 aa24.81■■□□□ 1.56
GNE-201ENST00000377902 FANCIQ9NVI1 1328 aa24.8■■□□□ 1.56
GNE-201ENST00000377902 CNGB1Q14028 1251 aaPredicted RBP24.8■■□□□ 1.56
GNE-201ENST00000377902 CCDC7Q96M83 1385 aa24.8■■□□□ 1.56
GNE-201ENST00000377902 HECW1Q76N89 1606 aa24.79■■□□□ 1.56
GNE-201ENST00000377902 THOC2Q8NI27 1593 aaKnown RBP24.79■■□□□ 1.56
GNE-201ENST00000377902 PPP4R2Q9NY27 417 aa24.79■■□□□ 1.56
GNE-201ENST00000377902 TCOF1Q13428 1488 aaKnown RBP24.79■■□□□ 1.56
GNE-201ENST00000377902 GCC2Q8IWJ2 1684 aa24.78■■□□□ 1.56
GNE-201ENST00000377902 CDK13Q14004 1512 aaKnown RBP24.76■■□□□ 1.55
GNE-201ENST00000377902 NCOA1Q15788 1441 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms