RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 CARMIL1Q5VZK9 1371 aa18.07■□□□□ 0.48
LINC01561-201ENST00000369071 PHLDB1Q86UU1 1377 aa18.07■□□□□ 0.48
LINC01561-201ENST00000369071 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
LINC01561-201ENST00000369071 CFAP43Q8NDM7 1665 aa18.04■□□□□ 0.48
LINC01561-201ENST00000369071 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
LINC01561-201ENST00000369071 WDR97A6NE52 1622 aa18.03■□□□□ 0.48
LINC01561-201ENST00000369071 FHAD1B1AJZ9 1412 aa18.02■□□□□ 0.47
LINC01561-201ENST00000369071 CADPSQ9ULU8 1353 aa18.01■□□□□ 0.47
LINC01561-201ENST00000369071 PCF11O94913 1555 aaKnown RBP17.99■□□□□ 0.47
LINC01561-201ENST00000369071 TSHZ2Q9NRE2 1034 aa17.98■□□□□ 0.47
LINC01561-201ENST00000369071 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
LINC01561-201ENST00000369071 TIMELESSQ9UNS1 1208 aa17.97■□□□□ 0.47
LINC01561-201ENST00000369071 FAM50AQ14320 339 aaKnown RBP17.96■□□□□ 0.46
LINC01561-201ENST00000369071 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
LINC01561-201ENST00000369071 DDX10Q13206 875 aaKnown RBP17.93■□□□□ 0.46
LINC01561-201ENST00000369071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.92■□□□□ 0.46
LINC01561-201ENST00000369071 FYCO1Q9BQS8 1478 aa17.91■□□□□ 0.46
LINC01561-201ENST00000369071 AQRO60306 1485 aaKnown RBP eCLIP17.89■□□□□ 0.45
LINC01561-201ENST00000369071 P3H3Q8IVL6 736 aa17.89■□□□□ 0.45
LINC01561-201ENST00000369071 EFCAB5A4FU69 1503 aa17.88■□□□□ 0.45
LINC01561-201ENST00000369071 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
LINC01561-201ENST00000369071 CASKIN1Q8WXD9 1431 aa17.88■□□□□ 0.45
LINC01561-201ENST00000369071 CC2D2AQ9P2K1 1620 aa17.85■□□□□ 0.45
LINC01561-201ENST00000369071 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
LINC01561-201ENST00000369071 ABCA10Q8WWZ4 1543 aa17.84■□□□□ 0.45
LINC01561-201ENST00000369071 FANCD2Q9BXW9 1451 aa17.83■□□□□ 0.45
LINC01561-201ENST00000369071 ATP1B4Q9UN42 357 aaPredicted RBP17.83■□□□□ 0.44
LINC01561-201ENST00000369071 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
LINC01561-201ENST00000369071 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
LINC01561-201ENST00000369071 FKBP8Q14318 412 aa17.81■□□□□ 0.44
LINC01561-201ENST00000369071 FGD6Q6ZV73 1430 aa17.81■□□□□ 0.44
LINC01561-201ENST00000369071 CUL7Q14999 1698 aa17.8■□□□□ 0.44
LINC01561-201ENST00000369071 CTTNBP2Q8WZ74 1663 aa17.79■□□□□ 0.44
LINC01561-201ENST00000369071 HIRIP3Q9BW71 556 aaPredicted RBP17.79■□□□□ 0.44
LINC01561-201ENST00000369071 BCANQ96GW7 911 aa17.78■□□□□ 0.44
LINC01561-201ENST00000369071 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
LINC01561-201ENST00000369071 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.44
LINC01561-201ENST00000369071 ANP32CO43423 234 aa17.77■□□□□ 0.43
LINC01561-201ENST00000369071 FMN1Q68DA7 1419 aa17.76■□□□□ 0.43
LINC01561-201ENST00000369071 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
LINC01561-201ENST00000369071 CCDC18Q5T9S5 1454 aa17.76■□□□□ 0.43
LINC01561-201ENST00000369071 HFM1A2PYH4 1435 aa17.75■□□□□ 0.43
LINC01561-201ENST00000369071 ANP32EQ9BTT0 268 aa17.75■□□□□ 0.43
LINC01561-201ENST00000369071 PTPRKQ15262 1439 aa17.74■□□□□ 0.43
LINC01561-201ENST00000369071 UACAQ9BZF9 1416 aa17.74■□□□□ 0.43
LINC01561-201ENST00000369071 TONSLQ96HA7 1378 aa17.74■□□□□ 0.43
LINC01561-201ENST00000369071 PTPN23Q9H3S7 1636 aa17.74■□□□□ 0.43
LINC01561-201ENST00000369071 TRIM52Q96A61 297 aa17.7■□□□□ 0.42
LINC01561-201ENST00000369071 NEFLP07196 543 aa17.69■□□□□ 0.42
LINC01561-201ENST00000369071 SAMD9Q5K651 1589 aa17.69■□□□□ 0.42
LINC01561-201ENST00000369071 MTUS2Q5JR59 1369 aa17.69■□□□□ 0.42
LINC01561-201ENST00000369071 LRRIQ1Q96JM4 1722 aa17.69■□□□□ 0.42
LINC01561-201ENST00000369071 NAIPQ13075 1403 aa17.69■□□□□ 0.42
LINC01561-201ENST00000369071 KDM5BQ9UGL1 1544 aa17.68■□□□□ 0.42
LINC01561-201ENST00000369071 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
LINC01561-201ENST00000369071 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
LINC01561-201ENST00000369071 GRIN2BQ13224 1484 aa17.65■□□□□ 0.42
LINC01561-201ENST00000369071 THOC2Q8NI27 1593 aaKnown RBP17.64■□□□□ 0.41
LINC01561-201ENST00000369071 NESP48681 1621 aa17.62■□□□□ 0.41
LINC01561-201ENST00000369071 SUPT6HQ7KZ85 1726 aaKnown RBP17.62■□□□□ 0.41
LINC01561-201ENST00000369071 EHBP1L1Q8N3D4 1523 aa17.61■□□□□ 0.41
LINC01561-201ENST00000369071 RBM19Q9Y4C8 960 aaKnown RBP17.6■□□□□ 0.41
LINC01561-201ENST00000369071 ABCA5Q8WWZ7 1642 aa17.6■□□□□ 0.41
LINC01561-201ENST00000369071 ARHGEF11O15085 1522 aa17.59■□□□□ 0.41
LINC01561-201ENST00000369071 UGGT2Q9NYU1 1516 aa17.59■□□□□ 0.41
LINC01561-201ENST00000369071 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.4
LINC01561-201ENST00000369071 MAGI3Q5TCQ9 1506 aa17.55■□□□□ 0.4
LINC01561-201ENST00000369071 DENND4BO75064 1496 aaPredicted RBP17.55■□□□□ 0.4
LINC01561-201ENST00000369071 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
LINC01561-201ENST00000369071 TDRD9Q8NDG6 1382 aaKnown RBP17.54■□□□□ 0.4
LINC01561-201ENST00000369071 GCC2Q8IWJ2 1684 aa17.54■□□□□ 0.4
LINC01561-201ENST00000369071 GAPVD1Q14C86 1478 aa17.54■□□□□ 0.4
LINC01561-201ENST00000369071 KIF21AQ7Z4S6 1674 aa17.54■□□□□ 0.4
LINC01561-201ENST00000369071 HECW1Q76N89 1606 aa17.53■□□□□ 0.4
LINC01561-201ENST00000369071 WASHC2AQ641Q2 1341 aa17.53■□□□□ 0.4
LINC01561-201ENST00000369071 HSPA5P11021 654 aaKnown RBP17.51■□□□□ 0.39
LINC01561-201ENST00000369071 AKNAQ7Z591 1439 aa17.51■□□□□ 0.39
LINC01561-201ENST00000369071 LAMC3Q9Y6N6 1575 aa17.51■□□□□ 0.39
LINC01561-201ENST00000369071 HNRNPUQ00839 825 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC01561-201ENST00000369071 RRP7BPQ9NSQ0 103 aa17.49■□□□□ 0.39
LINC01561-201ENST00000369071 KDM6BO15054 1643 aa17.48■□□□□ 0.39
LINC01561-201ENST00000369071 CHIC2Q9UKJ5 165 aa17.45■□□□□ 0.38
LINC01561-201ENST00000369071 EIF4G2P78344 907 aaKnown RBP eCLIP17.45■□□□□ 0.38
LINC01561-201ENST00000369071 CNTLNQ9NXG0 1405 aa17.44■□□□□ 0.38
LINC01561-201ENST00000369071 MIA2Q96PC5 1412 aa17.42■□□□□ 0.38
LINC01561-201ENST00000369071 MPHOSPH9Q99550 1183 aa17.42■□□□□ 0.38
LINC01561-201ENST00000369071 EPRSP07814 1512 aaKnown RBP17.41■□□□□ 0.38
LINC01561-201ENST00000369071 NCOA1Q15788 1441 aa17.4■□□□□ 0.38
LINC01561-201ENST00000369071 ERICH6BQ5W0A0 696 aa17.4■□□□□ 0.38
LINC01561-201ENST00000369071 MSH5O43196 834 aa17.39■□□□□ 0.37
LINC01561-201ENST00000369071 L3MBTL2Q969R5 705 aa17.39■□□□□ 0.37
LINC01561-201ENST00000369071 TARBP1Q13395 1621 aaKnown RBP17.39■□□□□ 0.37
LINC01561-201ENST00000369071 IRX6P78412 446 aaPredicted RBP17.39■□□□□ 0.37
LINC01561-201ENST00000369071 CCDC184Q52MB2 194 aa17.39■□□□□ 0.37
LINC01561-201ENST00000369071 C11orf95C9JLR9 678 aaPredicted RBP17.38■□□□□ 0.37
LINC01561-201ENST00000369071 CCDC7Q96M83 1385 aa17.38■□□□□ 0.37
LINC01561-201ENST00000369071 FANCIQ9NVI1 1328 aa17.37■□□□□ 0.37
LINC01561-201ENST00000369071 PDS5BQ9NTI5 1447 aa17.37■□□□□ 0.37
LINC01561-201ENST00000369071 CDK11AQ9UQ88 783 aaPredicted RBP17.36■□□□□ 0.37
LINC01561-201ENST00000369071 CDK13Q14004 1512 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms