RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 FAM50AQ14320 339 aaKnown RBP20.86■□□□□ 0.93
GFRA1-201ENST00000355422 SIN3AQ96ST3 1273 aa20.85■□□□□ 0.93
GFRA1-201ENST00000355422 FGD5Q6ZNL6 1462 aa20.84■□□□□ 0.93
GFRA1-201ENST00000355422 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
GFRA1-201ENST00000355422 CADPSQ9ULU8 1353 aa20.83■□□□□ 0.93
GFRA1-201ENST00000355422 P3H3Q8IVL6 736 aa20.83■□□□□ 0.93
GFRA1-201ENST00000355422 ATP1B4Q9UN42 357 aaPredicted RBP20.8■□□□□ 0.92
GFRA1-201ENST00000355422 WDR97A6NE52 1622 aa20.79■□□□□ 0.92
GFRA1-201ENST00000355422 FHAD1B1AJZ9 1412 aa20.79■□□□□ 0.92
GFRA1-201ENST00000355422 DDX10Q13206 875 aaKnown RBP20.79■□□□□ 0.92
GFRA1-201ENST00000355422 PCF11O94913 1555 aaKnown RBP20.75■□□□□ 0.91
GFRA1-201ENST00000355422 TSHZ2Q9NRE2 1034 aa20.73■□□□□ 0.91
GFRA1-201ENST00000355422 CFAP43Q8NDM7 1665 aa20.72■□□□□ 0.91
GFRA1-201ENST00000355422 FHOD3Q2V2M9 1422 aa20.7■□□□□ 0.9
GFRA1-201ENST00000355422 PPP1R15AO75807 674 aaPredicted RBP20.69■□□□□ 0.9
GFRA1-201ENST00000355422 HIRIP3Q9BW71 556 aaPredicted RBP20.69■□□□□ 0.9
GFRA1-201ENST00000355422 TIMELESSQ9UNS1 1208 aa20.68■□□□□ 0.9
GFRA1-201ENST00000355422 BCANQ96GW7 911 aa20.64■□□□□ 0.89
GFRA1-201ENST00000355422 RAD54L2Q9Y4B4 1467 aa20.63■□□□□ 0.89
GFRA1-201ENST00000355422 FYCO1Q9BQS8 1478 aa20.63■□□□□ 0.89
GFRA1-201ENST00000355422 FANCD2Q9BXW9 1451 aa20.63■□□□□ 0.89
GFRA1-201ENST00000355422 CASKIN1Q8WXD9 1431 aa20.62■□□□□ 0.89
GFRA1-201ENST00000355422 FKBP8Q14318 412 aa20.61■□□□□ 0.89
GFRA1-201ENST00000355422 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.6■□□□□ 0.89
GFRA1-201ENST00000355422 EFCAB5A4FU69 1503 aa20.58■□□□□ 0.88
GFRA1-201ENST00000355422 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
GFRA1-201ENST00000355422 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.88
GFRA1-201ENST00000355422 ANP32CO43423 234 aa20.55■□□□□ 0.88
GFRA1-201ENST00000355422 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
GFRA1-201ENST00000355422 CCER2I3L3R5 266 aa20.55■□□□□ 0.88
GFRA1-201ENST00000355422 FGD6Q6ZV73 1430 aa20.55■□□□□ 0.88
GFRA1-201ENST00000355422 DNMBPQ6XZF7 1577 aa20.54■□□□□ 0.88
GFRA1-201ENST00000355422 TRIM52Q96A61 297 aa20.53■□□□□ 0.88
GFRA1-201ENST00000355422 TONSLQ96HA7 1378 aa20.52■□□□□ 0.88
GFRA1-201ENST00000355422 TOPBP1Q92547 1522 aa20.52■□□□□ 0.87
GFRA1-201ENST00000355422 FMN1Q68DA7 1419 aa20.5■□□□□ 0.87
GFRA1-201ENST00000355422 CCDC18Q5T9S5 1454 aa20.5■□□□□ 0.87
GFRA1-201ENST00000355422 PTPRKQ15262 1439 aa20.5■□□□□ 0.87
GFRA1-201ENST00000355422 CC2D2AQ9P2K1 1620 aa20.5■□□□□ 0.87
GFRA1-201ENST00000355422 MTUS2Q5JR59 1369 aa20.49■□□□□ 0.87
GFRA1-201ENST00000355422 CUL7Q14999 1698 aa20.48■□□□□ 0.87
GFRA1-201ENST00000355422 SNAPC4Q5SXM2 1469 aa20.48■□□□□ 0.87
GFRA1-201ENST00000355422 CTTNBP2Q8WZ74 1663 aa20.47■□□□□ 0.87
GFRA1-201ENST00000355422 HFM1A2PYH4 1435 aa20.46■□□□□ 0.87
GFRA1-201ENST00000355422 NEFLP07196 543 aa20.46■□□□□ 0.87
GFRA1-201ENST00000355422 UACAQ9BZF9 1416 aa20.45■□□□□ 0.86
GFRA1-201ENST00000355422 NESP48681 1621 aa20.44■□□□□ 0.86
GFRA1-201ENST00000355422 ANP32EQ9BTT0 268 aa20.42■□□□□ 0.86
GFRA1-201ENST00000355422 PTPN23Q9H3S7 1636 aa20.42■□□□□ 0.86
GFRA1-201ENST00000355422 NAIPQ13075 1403 aa20.41■□□□□ 0.86
GFRA1-201ENST00000355422 NCOA2Q15596 1464 aa20.39■□□□□ 0.86
GFRA1-201ENST00000355422 MYOM3Q5VTT5 1437 aa20.38■□□□□ 0.85
GFRA1-201ENST00000355422 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
GFRA1-201ENST00000355422 LRRIQ1Q96JM4 1722 aa20.36■□□□□ 0.85
GFRA1-201ENST00000355422 GRIN2BQ13224 1484 aa20.35■□□□□ 0.85
GFRA1-201ENST00000355422 SAMD9Q5K651 1589 aa20.35■□□□□ 0.85
GFRA1-201ENST00000355422 KDM5BQ9UGL1 1544 aa20.32■□□□□ 0.84
GFRA1-201ENST00000355422 URB2Q14146 1524 aaKnown RBP20.32■□□□□ 0.84
GFRA1-201ENST00000355422 RRP7BPQ9NSQ0 103 aa20.31■□□□□ 0.84
GFRA1-201ENST00000355422 RBM19Q9Y4C8 960 aaKnown RBP20.31■□□□□ 0.84
GFRA1-201ENST00000355422 SUPT6HQ7KZ85 1726 aaKnown RBP20.3■□□□□ 0.84
GFRA1-201ENST00000355422 CHIC2Q9UKJ5 165 aa20.3■□□□□ 0.84
GFRA1-201ENST00000355422 EHBP1L1Q8N3D4 1523 aa20.28■□□□□ 0.84
GFRA1-201ENST00000355422 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
GFRA1-201ENST00000355422 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
GFRA1-201ENST00000355422 ABCA5Q8WWZ7 1642 aa20.26■□□□□ 0.83
GFRA1-201ENST00000355422 HSPA5P11021 654 aaKnown RBP20.26■□□□□ 0.83
GFRA1-201ENST00000355422 THOC2Q8NI27 1593 aaKnown RBP20.26■□□□□ 0.83
GFRA1-201ENST00000355422 UGGT2Q9NYU1 1516 aa20.26■□□□□ 0.83
GFRA1-201ENST00000355422 WASHC2AQ641Q2 1341 aa20.25■□□□□ 0.83
GFRA1-201ENST00000355422 MAGI3Q5TCQ9 1506 aa20.25■□□□□ 0.83
GFRA1-201ENST00000355422 ARHGEF11O15085 1522 aa20.23■□□□□ 0.83
GFRA1-201ENST00000355422 DENND4BO75064 1496 aaPredicted RBP20.22■□□□□ 0.83
GFRA1-201ENST00000355422 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
GFRA1-201ENST00000355422 TCOF1Q13428 1488 aaKnown RBP20.18■□□□□ 0.82
GFRA1-201ENST00000355422 EIF4G2P78344 907 aaKnown RBP eCLIP20.18■□□□□ 0.82
GFRA1-201ENST00000355422 IRX6P78412 446 aaPredicted RBP20.18■□□□□ 0.82
GFRA1-201ENST00000355422 KDM6BO15054 1643 aa20.16■□□□□ 0.82
GFRA1-201ENST00000355422 MPHOSPH9Q99550 1183 aa20.16■□□□□ 0.82
GFRA1-201ENST00000355422 GCC2Q8IWJ2 1684 aa20.15■□□□□ 0.82
GFRA1-201ENST00000355422 HECW1Q76N89 1606 aa20.15■□□□□ 0.82
GFRA1-201ENST00000355422 FOXD1Q16676 465 aa20.14■□□□□ 0.82
GFRA1-201ENST00000355422 L3MBTL2Q969R5 705 aa20.14■□□□□ 0.82
GFRA1-201ENST00000355422 CCDC184Q52MB2 194 aa20.13■□□□□ 0.81
GFRA1-201ENST00000355422 ARID3CA6NKF2 412 aa20.12■□□□□ 0.81
GFRA1-201ENST00000355422 AKNAQ7Z591 1439 aa20.12■□□□□ 0.81
GFRA1-201ENST00000355422 KIF21AQ7Z4S6 1674 aa20.12■□□□□ 0.81
GFRA1-201ENST00000355422 C11orf95C9JLR9 678 aaPredicted RBP20.11■□□□□ 0.81
GFRA1-201ENST00000355422 EPRSP07814 1512 aaKnown RBP20.11■□□□□ 0.81
GFRA1-201ENST00000355422 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
GFRA1-201ENST00000355422 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
GFRA1-201ENST00000355422 CDK13Q14004 1512 aaKnown RBP20.09■□□□□ 0.81
GFRA1-201ENST00000355422 MIA2Q96PC5 1412 aa20.08■□□□□ 0.8
GFRA1-201ENST00000355422 PRKRIP1Q9H875 184 aaPredicted RBP20.06■□□□□ 0.8
GFRA1-201ENST00000355422 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
GFRA1-201ENST00000355422 CCDC7Q96M83 1385 aa20.06■□□□□ 0.8
GFRA1-201ENST00000355422 MSH5O43196 834 aa20.05■□□□□ 0.8
GFRA1-201ENST00000355422 NCOA1Q15788 1441 aa20.05■□□□□ 0.8
GFRA1-201ENST00000355422 NBPF8Q3BBV2 869 aa20.04■□□□□ 0.8
GFRA1-201ENST00000355422 FAM9BQ8IZU0 186 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms