RNA–Protein interactions for RNA: ENST00000345633.8

CASP7-201, Transcript of caspase 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CASP7, Length 2,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-201ENST00000345633 KCNH8Q96L42 1107 aa17.9■□□□□ 0.46
CASP7-201ENST00000345633 SIN3AQ96ST3 1273 aa17.9■□□□□ 0.46
CASP7-201ENST00000345633 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
CASP7-201ENST00000345633 HIRIP3Q9BW71 556 aaPredicted RBP17.89■□□□□ 0.45
CASP7-201ENST00000345633 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
CASP7-201ENST00000345633 PHLDB1Q86UU1 1377 aa17.86■□□□□ 0.45
CASP7-201ENST00000345633 FHOD3Q2V2M9 1422 aa17.82■□□□□ 0.44
CASP7-201ENST00000345633 PRDM2Q13029 1718 aa17.82■□□□□ 0.44
CASP7-201ENST00000345633 TIAM1Q13009 1591 aa17.82■□□□□ 0.44
CASP7-201ENST00000345633 NESP48681 1621 aa17.81■□□□□ 0.44
CASP7-201ENST00000345633 BCANQ96GW7 911 aa17.81■□□□□ 0.44
CASP7-201ENST00000345633 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
CASP7-201ENST00000345633 LRRC9Q6ZRR7 1453 aa17.78■□□□□ 0.44
CASP7-201ENST00000345633 FANCD2Q9BXW9 1451 aa17.78■□□□□ 0.44
CASP7-201ENST00000345633 MAPKBP1O60336 1514 aa17.77■□□□□ 0.44
CASP7-201ENST00000345633 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
CASP7-201ENST00000345633 PCF11O94913 1555 aaKnown RBP17.76■□□□□ 0.43
CASP7-201ENST00000345633 SETD5Q9C0A6 1442 aa17.74■□□□□ 0.43
CASP7-201ENST00000345633 RBM19Q9Y4C8 960 aaKnown RBP17.74■□□□□ 0.43
CASP7-201ENST00000345633 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
CASP7-201ENST00000345633 FKBP8Q14318 412 aa17.71■□□□□ 0.43
CASP7-201ENST00000345633 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
CASP7-201ENST00000345633 POLA1P09884 1462 aaPredicted RBP17.68■□□□□ 0.42
CASP7-201ENST00000345633 FHAD1B1AJZ9 1412 aa17.67■□□□□ 0.42
CASP7-201ENST00000345633 TDRD9Q8NDG6 1382 aaKnown RBP17.67■□□□□ 0.42
CASP7-201ENST00000345633 ARID3CA6NKF2 412 aa17.66■□□□□ 0.42
CASP7-201ENST00000345633 TOPBP1Q92547 1522 aa17.65■□□□□ 0.42
CASP7-201ENST00000345633 PRKCSHP14314 528 aaPredicted RBP17.65■□□□□ 0.42
CASP7-201ENST00000345633 MAP3K1Q13233 1512 aa17.61■□□□□ 0.41
CASP7-201ENST00000345633 CFAP43Q8NDM7 1665 aa17.61■□□□□ 0.41
CASP7-201ENST00000345633 MSH5O43196 834 aa17.6■□□□□ 0.41
CASP7-201ENST00000345633 DNMBPQ6XZF7 1577 aa17.59■□□□□ 0.41
CASP7-201ENST00000345633 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
CASP7-201ENST00000345633 CHIC2Q9UKJ5 165 aa17.57■□□□□ 0.4
CASP7-201ENST00000345633 MTUS2Q5JR59 1369 aa17.57■□□□□ 0.4
CASP7-201ENST00000345633 TRIM52Q96A61 297 aa17.56■□□□□ 0.4
CASP7-201ENST00000345633 NEFLP07196 543 aa17.54■□□□□ 0.4
CASP7-201ENST00000345633 PTPRKQ15262 1439 aa17.54■□□□□ 0.4
CASP7-201ENST00000345633 CASKIN1Q8WXD9 1431 aa17.53■□□□□ 0.4
CASP7-201ENST00000345633 URB2Q14146 1524 aaKnown RBP17.53■□□□□ 0.4
CASP7-201ENST00000345633 FYCO1Q9BQS8 1478 aa17.53■□□□□ 0.4
CASP7-201ENST00000345633 PPP1R15AO75807 674 aaPredicted RBP17.53■□□□□ 0.4
CASP7-201ENST00000345633 RRP7BPQ9NSQ0 103 aa17.53■□□□□ 0.4
CASP7-201ENST00000345633 CTTNBP2Q8WZ74 1663 aa17.52■□□□□ 0.4
CASP7-201ENST00000345633 FGD6Q6ZV73 1430 aa17.51■□□□□ 0.39
CASP7-201ENST00000345633 LRRIQ1Q96JM4 1722 aa17.5■□□□□ 0.39
CASP7-201ENST00000345633 TONSLQ96HA7 1378 aa17.48■□□□□ 0.39
CASP7-201ENST00000345633 CCDC18Q5T9S5 1454 aa17.47■□□□□ 0.39
CASP7-201ENST00000345633 EFCAB5A4FU69 1503 aa17.46■□□□□ 0.39
CASP7-201ENST00000345633 SNAPC4Q5SXM2 1469 aa17.46■□□□□ 0.39
CASP7-201ENST00000345633 FMN1Q68DA7 1419 aa17.46■□□□□ 0.38
CASP7-201ENST00000345633 CUL7Q14999 1698 aa17.45■□□□□ 0.38
CASP7-201ENST00000345633 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
CASP7-201ENST00000345633 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
CASP7-201ENST00000345633 FOXD1Q16676 465 aa17.44■□□□□ 0.38
CASP7-201ENST00000345633 FANCIQ9NVI1 1328 aa17.43■□□□□ 0.38
CASP7-201ENST00000345633 ERICH6Q7L0X2 663 aa17.43■□□□□ 0.38
CASP7-201ENST00000345633 ANP32CO43423 234 aa17.43■□□□□ 0.38
CASP7-201ENST00000345633 NCOA2Q15596 1464 aa17.42■□□□□ 0.38
CASP7-201ENST00000345633 TIMELESSQ9UNS1 1208 aa17.38■□□□□ 0.37
CASP7-201ENST00000345633 PTPN23Q9H3S7 1636 aa17.37■□□□□ 0.37
CASP7-201ENST00000345633 NAIPQ13075 1403 aa17.37■□□□□ 0.37
CASP7-201ENST00000345633 KIF21AQ7Z4S6 1674 aa17.37■□□□□ 0.37
CASP7-201ENST00000345633 MAGI3Q5TCQ9 1506 aa17.37■□□□□ 0.37
CASP7-201ENST00000345633 MYOM3Q5VTT5 1437 aa17.36■□□□□ 0.37
CASP7-201ENST00000345633 ABCA5Q8WWZ7 1642 aa17.35■□□□□ 0.37
CASP7-201ENST00000345633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.35■□□□□ 0.37
CASP7-201ENST00000345633 GRIN2BQ13224 1484 aa17.35■□□□□ 0.37
CASP7-201ENST00000345633 HFM1A2PYH4 1435 aa17.34■□□□□ 0.37
CASP7-201ENST00000345633 CNGB1Q14028 1251 aaPredicted RBP17.34■□□□□ 0.37
CASP7-201ENST00000345633 UACAQ9BZF9 1416 aa17.34■□□□□ 0.37
CASP7-201ENST00000345633 MYT1LQ9UL68 1186 aa17.33■□□□□ 0.36
CASP7-201ENST00000345633 SAMD9Q5K651 1589 aa17.33■□□□□ 0.36
CASP7-201ENST00000345633 IRX6P78412 446 aaPredicted RBP17.32■□□□□ 0.36
CASP7-201ENST00000345633 LAMC3Q9Y6N6 1575 aa17.32■□□□□ 0.36
CASP7-201ENST00000345633 DEKP35659 375 aaKnown RBP17.32■□□□□ 0.36
CASP7-201ENST00000345633 SUPT6HQ7KZ85 1726 aaKnown RBP17.31■□□□□ 0.36
CASP7-201ENST00000345633 CDK13Q14004 1512 aaKnown RBP17.31■□□□□ 0.36
CASP7-201ENST00000345633 KDM6BO15054 1643 aa17.3■□□□□ 0.36
CASP7-201ENST00000345633 CDK11AQ9UQ88 783 aaPredicted RBP17.3■□□□□ 0.36
CASP7-201ENST00000345633 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
CASP7-201ENST00000345633 HSPA5P11021 654 aaKnown RBP17.28■□□□□ 0.36
CASP7-201ENST00000345633 CCER2I3L3R5 266 aa17.27■□□□□ 0.36
CASP7-201ENST00000345633 ZNF644Q9H582 1327 aaPredicted RBP17.27■□□□□ 0.35
CASP7-201ENST00000345633 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
CASP7-201ENST00000345633 EHBP1L1Q8N3D4 1523 aa17.24■□□□□ 0.35
CASP7-201ENST00000345633 UGGT2Q9NYU1 1516 aa17.24■□□□□ 0.35
CASP7-201ENST00000345633 WASHC2AQ641Q2 1341 aa17.24■□□□□ 0.35
CASP7-201ENST00000345633 CCDC184Q52MB2 194 aa17.24■□□□□ 0.35
CASP7-201ENST00000345633 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
CASP7-201ENST00000345633 L3MBTL2Q969R5 705 aa17.23■□□□□ 0.35
CASP7-201ENST00000345633 DENND4BO75064 1496 aaPredicted RBP17.22■□□□□ 0.35
CASP7-201ENST00000345633 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
CASP7-201ENST00000345633 C11orf95C9JLR9 678 aaPredicted RBP17.22■□□□□ 0.35
CASP7-201ENST00000345633 SENP3-EIF4A1A0A087X0R7 540 aa17.21■□□□□ 0.35
CASP7-201ENST00000345633 KDM5BQ9UGL1 1544 aa17.21■□□□□ 0.35
CASP7-201ENST00000345633 THOC2Q8NI27 1593 aaKnown RBP17.21■□□□□ 0.34
CASP7-201ENST00000345633 EPRSP07814 1512 aaKnown RBP17.2■□□□□ 0.34
CASP7-201ENST00000345633 ANO8Q9HCE9 1232 aaPredicted RBP17.2■□□□□ 0.34
CASP7-201ENST00000345633 PBRM1Q86U86 1689 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms