RNA–Protein interactions for RNA: ENST00000341928.6

EPB41L3-201, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EPB41L3, Length 4,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-201ENST00000341928 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
EPB41L3-201ENST00000341928 HMGXB3Q12766 1538 aa21.12■□□□□ 0.97
EPB41L3-201ENST00000341928 SIN3AQ96ST3 1273 aa21.09■□□□□ 0.97
EPB41L3-201ENST00000341928 HIRIP3Q9BW71 556 aaPredicted RBP21.09■□□□□ 0.97
EPB41L3-201ENST00000341928 FGD5Q6ZNL6 1462 aa21.09■□□□□ 0.97
EPB41L3-201ENST00000341928 RRP7BPQ9NSQ0 103 aa21.08■□□□□ 0.97
EPB41L3-201ENST00000341928 CUX1P39880 1505 aa21.07■□□□□ 0.96
EPB41L3-201ENST00000341928 ZNF326Q5BKZ1 582 aaKnown RBP21.07■□□□□ 0.96
EPB41L3-201ENST00000341928 PRXQ9BXM0 1461 aa21.06■□□□□ 0.96
EPB41L3-201ENST00000341928 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
EPB41L3-201ENST00000341928 CHMP7Q8WUX9 453 aaPredicted RBP21.05■□□□□ 0.96
EPB41L3-201ENST00000341928 FHOD3Q2V2M9 1422 aa21.03■□□□□ 0.96
EPB41L3-201ENST00000341928 ERICH3Q5RHP9 1530 aa21.03■□□□□ 0.96
EPB41L3-201ENST00000341928 MYT1LQ9UL68 1186 aa21.02■□□□□ 0.96
EPB41L3-201ENST00000341928 RAB3GAP2Q9H2M9 1393 aa21.02■□□□□ 0.95
EPB41L3-201ENST00000341928 SETD5Q9C0A6 1442 aa21.01■□□□□ 0.95
EPB41L3-201ENST00000341928 ARAP1Q96P48 1450 aa21■□□□□ 0.95
EPB41L3-201ENST00000341928 BCANQ96GW7 911 aa20.99■□□□□ 0.95
EPB41L3-201ENST00000341928 DHX57Q6P158 1386 aaKnown RBP20.99■□□□□ 0.95
EPB41L3-201ENST00000341928 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
EPB41L3-201ENST00000341928 ARHGAP35Q9NRY4 1499 aa20.97■□□□□ 0.95
EPB41L3-201ENST00000341928 FMN1Q68DA7 1419 aa20.94■□□□□ 0.94
EPB41L3-201ENST00000341928 CC2D2AQ9P2K1 1620 aa20.87■□□□□ 0.93
EPB41L3-201ENST00000341928 NESP48681 1621 aa20.85■□□□□ 0.93
EPB41L3-201ENST00000341928 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.92
EPB41L3-201ENST00000341928 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
EPB41L3-201ENST00000341928 TIMELESSQ9UNS1 1208 aa20.81■□□□□ 0.92
EPB41L3-201ENST00000341928 ERICH6Q7L0X2 663 aa20.8■□□□□ 0.92
EPB41L3-201ENST00000341928 CFDP1Q9UEE9 299 aaPredicted RBP20.79■□□□□ 0.92
EPB41L3-201ENST00000341928 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
EPB41L3-201ENST00000341928 PHLDB1Q86UU1 1377 aa20.78■□□□□ 0.92
EPB41L3-201ENST00000341928 PLEKHD1A6NEE1 506 aa20.77■□□□□ 0.92
EPB41L3-201ENST00000341928 TSPY4P0CV99 314 aa20.77■□□□□ 0.92
EPB41L3-201ENST00000341928 TSPY10P0CW01 314 aa20.77■□□□□ 0.92
EPB41L3-201ENST00000341928 EIF4G2P78344 907 aaKnown RBP eCLIP20.76■□□□□ 0.91
EPB41L3-201ENST00000341928 GAPVD1Q14C86 1478 aa20.76■□□□□ 0.91
EPB41L3-201ENST00000341928 RRBP1Q9P2E9 1410 aaKnown RBP20.76■□□□□ 0.91
EPB41L3-201ENST00000341928 FKBP8Q14318 412 aa20.76■□□□□ 0.91
EPB41L3-201ENST00000341928 LRRC9Q6ZRR7 1453 aa20.75■□□□□ 0.91
EPB41L3-201ENST00000341928 HNRNPUQ00839 825 aaKnown RBP eCLIP20.75■□□□□ 0.91
EPB41L3-201ENST00000341928 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
EPB41L3-201ENST00000341928 POLA1P09884 1462 aaPredicted RBP20.73■□□□□ 0.91
EPB41L3-201ENST00000341928 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
EPB41L3-201ENST00000341928 FAM9BQ8IZU0 186 aa20.66■□□□□ 0.9
EPB41L3-201ENST00000341928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.64■□□□□ 0.89
EPB41L3-201ENST00000341928 KDM2AQ9Y2K7 1162 aa20.64■□□□□ 0.89
EPB41L3-201ENST00000341928 CASKIN1Q8WXD9 1431 aa20.64■□□□□ 0.89
EPB41L3-201ENST00000341928 FOXD1Q16676 465 aa20.63■□□□□ 0.89
EPB41L3-201ENST00000341928 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
EPB41L3-201ENST00000341928 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
EPB41L3-201ENST00000341928 MYT1Q01538 1121 aa20.63■□□□□ 0.89
EPB41L3-201ENST00000341928 AQRO60306 1485 aaKnown RBP eCLIP20.6■□□□□ 0.89
EPB41L3-201ENST00000341928 TIAM1Q13009 1591 aa20.59■□□□□ 0.89
EPB41L3-201ENST00000341928 FGD6Q6ZV73 1430 aa20.59■□□□□ 0.89
EPB41L3-201ENST00000341928 MRS2Q9HD23 443 aa20.58■□□□□ 0.89
EPB41L3-201ENST00000341928 MPHOSPH9Q99550 1183 aa20.58■□□□□ 0.89
EPB41L3-201ENST00000341928 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.89
EPB41L3-201ENST00000341928 KCNH8Q96L42 1107 aa20.57■□□□□ 0.88
EPB41L3-201ENST00000341928 FYCO1Q9BQS8 1478 aa20.57■□□□□ 0.88
EPB41L3-201ENST00000341928 CCDC18Q5T9S5 1454 aa20.53■□□□□ 0.88
EPB41L3-201ENST00000341928 EFCAB5A4FU69 1503 aa20.52■□□□□ 0.88
EPB41L3-201ENST00000341928 HSPA5P11021 654 aaKnown RBP20.52■□□□□ 0.87
EPB41L3-201ENST00000341928 CARMIL2Q6F5E8 1435 aa20.51■□□□□ 0.87
EPB41L3-201ENST00000341928 MYOM3Q5VTT5 1437 aa20.51■□□□□ 0.87
EPB41L3-201ENST00000341928 SUPT16HQ9Y5B9 1047 aaKnown RBP20.5■□□□□ 0.87
EPB41L3-201ENST00000341928 JPH4Q96JJ6 628 aa20.49■□□□□ 0.87
EPB41L3-201ENST00000341928 NCOA2Q15596 1464 aa20.47■□□□□ 0.87
EPB41L3-201ENST00000341928 CCER2I3L3R5 266 aa20.47■□□□□ 0.87
EPB41L3-201ENST00000341928 L3MBTL2Q969R5 705 aa20.46■□□□□ 0.87
EPB41L3-201ENST00000341928 RGL3Q3MIN7 710 aa20.45■□□□□ 0.86
EPB41L3-201ENST00000341928 IRX6P78412 446 aaPredicted RBP20.44■□□□□ 0.86
EPB41L3-201ENST00000341928 TMC1Q8TDI8 760 aa20.44■□□□□ 0.86
EPB41L3-201ENST00000341928 LAMC3Q9Y6N6 1575 aa20.44■□□□□ 0.86
EPB41L3-201ENST00000341928 PCF11O94913 1555 aaKnown RBP20.43■□□□□ 0.86
EPB41L3-201ENST00000341928 PKD2Q13563 968 aa20.43■□□□□ 0.86
EPB41L3-201ENST00000341928 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
EPB41L3-201ENST00000341928 MAP3K1Q13233 1512 aa20.41■□□□□ 0.86
EPB41L3-201ENST00000341928 GRIN2BQ13224 1484 aa20.41■□□□□ 0.86
EPB41L3-201ENST00000341928 CARD11Q9BXL7 1154 aa20.41■□□□□ 0.86
EPB41L3-201ENST00000341928 UACAQ9BZF9 1416 aa20.4■□□□□ 0.86
EPB41L3-201ENST00000341928 ZNF644Q9H582 1327 aaPredicted RBP20.38■□□□□ 0.85
EPB41L3-201ENST00000341928 MRC2Q9UBG0 1479 aa20.36■□□□□ 0.85
EPB41L3-201ENST00000341928 CUL7Q14999 1698 aa20.36■□□□□ 0.85
EPB41L3-201ENST00000341928 SALL2Q9Y467 1007 aaPredicted RBP20.35■□□□□ 0.85
EPB41L3-201ENST00000341928 ANKRD30AQ9BXX3 1397 aa20.34■□□□□ 0.85
EPB41L3-201ENST00000341928 DCAF11Q8TEB1 546 aa20.32■□□□□ 0.84
EPB41L3-201ENST00000341928 NUP155O75694 1391 aa20.32■□□□□ 0.84
EPB41L3-201ENST00000341928 NPM1P06748 294 aaKnown RBP eCLIP20.32■□□□□ 0.84
EPB41L3-201ENST00000341928 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.32■□□□□ 0.84
EPB41L3-201ENST00000341928 SENP3-EIF4A1A0A087X0R7 540 aa20.31■□□□□ 0.84
EPB41L3-201ENST00000341928 HNRNPMP52272 730 aaKnown RBP eCLIP20.31■□□□□ 0.84
EPB41L3-201ENST00000341928 CHGAP10645 457 aaKnown RBP20.29■□□□□ 0.84
EPB41L3-201ENST00000341928 HFM1A2PYH4 1435 aa20.29■□□□□ 0.84
EPB41L3-201ENST00000341928 EHBP1L1Q8N3D4 1523 aa20.27■□□□□ 0.84
EPB41L3-201ENST00000341928 IFT140Q96RY7 1462 aa20.26■□□□□ 0.83
EPB41L3-201ENST00000341928 PRDM2Q13029 1718 aa20.25■□□□□ 0.83
EPB41L3-201ENST00000341928 WDR97A6NE52 1622 aa20.23■□□□□ 0.83
EPB41L3-201ENST00000341928 NAIPQ13075 1403 aa20.22■□□□□ 0.83
EPB41L3-201ENST00000341928 PTPRGP23470 1445 aa20.2■□□□□ 0.82
EPB41L3-201ENST00000341928 EPRSP07814 1512 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms