RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 MYT1Q01538 1121 aa23.77■■□□□ 1.4
SSH3-201ENST00000308127 TSHZ2Q9NRE2 1034 aa23.77■■□□□ 1.4
SSH3-201ENST00000308127 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
SSH3-201ENST00000308127 SETD5Q9C0A6 1442 aa23.72■■□□□ 1.39
SSH3-201ENST00000308127 WDR97A6NE52 1622 aa23.72■■□□□ 1.39
SSH3-201ENST00000308127 TRIM52Q96A61 297 aa23.72■■□□□ 1.39
SSH3-201ENST00000308127 FKBP8Q14318 412 aa23.71■■□□□ 1.39
SSH3-201ENST00000308127 HMGXB3Q12766 1538 aa23.7■■□□□ 1.39
SSH3-201ENST00000308127 TIAM1Q13009 1591 aa23.68■■□□□ 1.38
SSH3-201ENST00000308127 LRRC9Q6ZRR7 1453 aa23.66■■□□□ 1.38
SSH3-201ENST00000308127 FHOD3Q2V2M9 1422 aa23.65■■□□□ 1.38
SSH3-201ENST00000308127 FGD5Q6ZNL6 1462 aa23.64■■□□□ 1.38
SSH3-201ENST00000308127 PPP1R15AO75807 674 aaPredicted RBP23.56■■□□□ 1.36
SSH3-201ENST00000308127 PCF11O94913 1555 aaKnown RBP23.55■■□□□ 1.36
SSH3-201ENST00000308127 CADPSQ9ULU8 1353 aa23.55■■□□□ 1.36
SSH3-201ENST00000308127 RAD54L2Q9Y4B4 1467 aa23.54■■□□□ 1.36
SSH3-201ENST00000308127 ANP32CO43423 234 aa23.48■■□□□ 1.35
SSH3-201ENST00000308127 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
SSH3-201ENST00000308127 IRX6P78412 446 aaPredicted RBP23.43■■□□□ 1.34
SSH3-201ENST00000308127 TONSLQ96HA7 1378 aa23.43■■□□□ 1.34
SSH3-201ENST00000308127 NEFLP07196 543 aa23.42■■□□□ 1.34
SSH3-201ENST00000308127 ARID3CA6NKF2 412 aa23.41■■□□□ 1.34
SSH3-201ENST00000308127 MAP3K1Q13233 1512 aa23.4■■□□□ 1.34
SSH3-201ENST00000308127 CHIC2Q9UKJ5 165 aa23.4■■□□□ 1.34
SSH3-201ENST00000308127 FANCD2Q9BXW9 1451 aa23.37■■□□□ 1.33
SSH3-201ENST00000308127 PTPRKQ15262 1439 aa23.37■■□□□ 1.33
SSH3-201ENST00000308127 MTUS2Q5JR59 1369 aa23.36■■□□□ 1.33
SSH3-201ENST00000308127 RRP7BPQ9NSQ0 103 aa23.35■■□□□ 1.33
SSH3-201ENST00000308127 ANP32EQ9BTT0 268 aa23.35■■□□□ 1.33
SSH3-201ENST00000308127 NESP48681 1621 aa23.34■■□□□ 1.33
SSH3-201ENST00000308127 CFAP43Q8NDM7 1665 aa23.33■■□□□ 1.33
SSH3-201ENST00000308127 FGD6Q6ZV73 1430 aa23.31■■□□□ 1.32
SSH3-201ENST00000308127 CCDC18Q5T9S5 1454 aa23.31■■□□□ 1.32
SSH3-201ENST00000308127 HNRNPUQ00839 825 aaKnown RBP eCLIP23.3■■□□□ 1.32
SSH3-201ENST00000308127 TDRD9Q8NDG6 1382 aaKnown RBP23.3■■□□□ 1.32
SSH3-201ENST00000308127 PRDM2Q13029 1718 aa23.29■■□□□ 1.32
SSH3-201ENST00000308127 CASKIN1Q8WXD9 1431 aa23.28■■□□□ 1.32
SSH3-201ENST00000308127 RBM19Q9Y4C8 960 aaKnown RBP23.28■■□□□ 1.32
SSH3-201ENST00000308127 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
SSH3-201ENST00000308127 CCER2I3L3R5 266 aa23.27■■□□□ 1.32
SSH3-201ENST00000308127 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.32
SSH3-201ENST00000308127 FYCO1Q9BQS8 1478 aa23.27■■□□□ 1.31
SSH3-201ENST00000308127 FOXD1Q16676 465 aa23.26■■□□□ 1.31
SSH3-201ENST00000308127 TIMELESSQ9UNS1 1208 aa23.26■■□□□ 1.31
SSH3-201ENST00000308127 CNGB1Q14028 1251 aaPredicted RBP23.25■■□□□ 1.31
SSH3-201ENST00000308127 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
SSH3-201ENST00000308127 CC2D2AQ9P2K1 1620 aa23.2■■□□□ 1.3
SSH3-201ENST00000308127 CCDC184Q52MB2 194 aa23.19■■□□□ 1.3
SSH3-201ENST00000308127 HSPA5P11021 654 aaKnown RBP23.18■■□□□ 1.3
SSH3-201ENST00000308127 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
SSH3-201ENST00000308127 NAIPQ13075 1403 aa23.17■■□□□ 1.3
SSH3-201ENST00000308127 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
SSH3-201ENST00000308127 UACAQ9BZF9 1416 aa23.16■■□□□ 1.3
SSH3-201ENST00000308127 NCOA2Q15596 1464 aa23.15■■□□□ 1.3
SSH3-201ENST00000308127 SNAPC4Q5SXM2 1469 aa23.15■■□□□ 1.3
SSH3-201ENST00000308127 WASHC2AQ641Q2 1341 aa23.15■■□□□ 1.3
SSH3-201ENST00000308127 HFM1A2PYH4 1435 aa23.15■■□□□ 1.3
SSH3-201ENST00000308127 DNAJC5BQ9UF47 199 aa23.15■■□□□ 1.3
SSH3-201ENST00000308127 PTPN23Q9H3S7 1636 aa23.13■■□□□ 1.29
SSH3-201ENST00000308127 SENP3-EIF4A1A0A087X0R7 540 aa23.13■■□□□ 1.29
SSH3-201ENST00000308127 DNMBPQ6XZF7 1577 aa23.13■■□□□ 1.29
SSH3-201ENST00000308127 EFCAB5A4FU69 1503 aa23.12■■□□□ 1.29
SSH3-201ENST00000308127 FAM9BQ8IZU0 186 aa23.1■■□□□ 1.29
SSH3-201ENST00000308127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.09■■□□□ 1.29
SSH3-201ENST00000308127 MYOM3Q5VTT5 1437 aa23.09■■□□□ 1.29
SSH3-201ENST00000308127 C11orf95C9JLR9 678 aaPredicted RBP23.07■■□□□ 1.28
SSH3-201ENST00000308127 LRRIQ1Q96JM4 1722 aa23.07■■□□□ 1.28
SSH3-201ENST00000308127 CTTNBP2Q8WZ74 1663 aa23.06■■□□□ 1.28
SSH3-201ENST00000308127 MSH5O43196 834 aa23.05■■□□□ 1.28
SSH3-201ENST00000308127 L3MBTL2Q969R5 705 aa23.04■■□□□ 1.28
SSH3-201ENST00000308127 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
SSH3-201ENST00000308127 KDM5BQ9UGL1 1544 aa23.02■■□□□ 1.28
SSH3-201ENST00000308127 MAGI3Q5TCQ9 1506 aa23.01■■□□□ 1.27
SSH3-201ENST00000308127 EIF4G2P78344 907 aaKnown RBP eCLIP23■■□□□ 1.27
SSH3-201ENST00000308127 POLR3GLQ9BT43 218 aa23■■□□□ 1.27
SSH3-201ENST00000308127 MPHOSPH9Q99550 1183 aa22.99■■□□□ 1.27
SSH3-201ENST00000308127 KDM6BO15054 1643 aa22.99■■□□□ 1.27
SSH3-201ENST00000308127 CUL7Q14999 1698 aa22.99■■□□□ 1.27
SSH3-201ENST00000308127 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
SSH3-201ENST00000308127 GAPVD1Q14C86 1478 aa22.97■■□□□ 1.27
SSH3-201ENST00000308127 DENND4BO75064 1496 aaPredicted RBP22.97■■□□□ 1.27
SSH3-201ENST00000308127 MRS2Q9HD23 443 aa22.95■■□□□ 1.26
SSH3-201ENST00000308127 NBPF8Q3BBV2 869 aa22.94■■□□□ 1.26
SSH3-201ENST00000308127 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
SSH3-201ENST00000308127 B4GALNT3Q6L9W6 998 aa22.93■■□□□ 1.26
SSH3-201ENST00000308127 ZNF326Q5BKZ1 582 aaKnown RBP22.92■■□□□ 1.26
SSH3-201ENST00000308127 CDK11AQ9UQ88 783 aaPredicted RBP22.92■■□□□ 1.26
SSH3-201ENST00000308127 SUPT6HQ7KZ85 1726 aaKnown RBP22.92■■□□□ 1.26
SSH3-201ENST00000308127 CDK13Q14004 1512 aaKnown RBP22.91■■□□□ 1.26
SSH3-201ENST00000308127 SAMD9Q5K651 1589 aa22.89■■□□□ 1.26
SSH3-201ENST00000308127 PRKRIP1Q9H875 184 aaPredicted RBP22.88■■□□□ 1.25
SSH3-201ENST00000308127 UGGT2Q9NYU1 1516 aa22.88■■□□□ 1.25
SSH3-201ENST00000308127 EHBP1L1Q8N3D4 1523 aa22.88■■□□□ 1.25
SSH3-201ENST00000308127 BCL11AQ9H165 835 aa22.87■■□□□ 1.25
SSH3-201ENST00000308127 CNTLNQ9NXG0 1405 aa22.84■■□□□ 1.25
SSH3-201ENST00000308127 SLC4A1APQ9BWU0 796 aaKnown RBP22.83■■□□□ 1.25
SSH3-201ENST00000308127 CCDC7Q96M83 1385 aa22.83■■□□□ 1.24
SSH3-201ENST00000308127 ABCA5Q8WWZ7 1642 aa22.81■■□□□ 1.24
SSH3-201ENST00000308127 ERICH6Q7L0X2 663 aa22.8■■□□□ 1.24
SSH3-201ENST00000308127 LAMC3Q9Y6N6 1575 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms