RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 SETD5Q9C0A6 1442 aa29.13■■■□□ 2.25
RCN1-201ENST00000054950 LRRC9Q6ZRR7 1453 aa29.13■■■□□ 2.25
RCN1-201ENST00000054950 ATP1B4Q9UN42 357 aaPredicted RBP29.12■■■□□ 2.25
RCN1-201ENST00000054950 WDR97A6NE52 1622 aa29.11■■■□□ 2.25
RCN1-201ENST00000054950 DDX10Q13206 875 aaKnown RBP29.08■■■□□ 2.25
RCN1-201ENST00000054950 FGD5Q6ZNL6 1462 aa29.08■■■□□ 2.25
RCN1-201ENST00000054950 PRDM2Q13029 1718 aa29.07■■■□□ 2.24
RCN1-201ENST00000054950 HIRIP3Q9BW71 556 aaPredicted RBP29.06■■■□□ 2.24
RCN1-201ENST00000054950 MAP3K1Q13233 1512 aa29.04■■■□□ 2.24
RCN1-201ENST00000054950 TSHZ2Q9NRE2 1034 aa29.02■■■□□ 2.24
RCN1-201ENST00000054950 PCF11O94913 1555 aaKnown RBP29.02■■■□□ 2.24
RCN1-201ENST00000054950 BCANQ96GW7 911 aa29.01■■■□□ 2.23
RCN1-201ENST00000054950 CADPSQ9ULU8 1353 aa28.97■■■□□ 2.23
RCN1-201ENST00000054950 FHOD3Q2V2M9 1422 aa28.95■■■□□ 2.22
RCN1-201ENST00000054950 CFAP43Q8NDM7 1665 aa28.94■■■□□ 2.22
RCN1-201ENST00000054950 FHAD1B1AJZ9 1412 aa28.92■■■□□ 2.22
RCN1-201ENST00000054950 PPP1R15AO75807 674 aaPredicted RBP28.87■■■□□ 2.21
RCN1-201ENST00000054950 FKBP8Q14318 412 aa28.85■■■□□ 2.21
RCN1-201ENST00000054950 RAD54L2Q9Y4B4 1467 aa28.84■■■□□ 2.21
RCN1-201ENST00000054950 TRIM52Q96A61 297 aa28.78■■■□□ 2.2
RCN1-201ENST00000054950 FANCD2Q9BXW9 1451 aa28.75■■■□□ 2.19
RCN1-201ENST00000054950 FYCO1Q9BQS8 1478 aa28.74■■■□□ 2.19
RCN1-201ENST00000054950 CASKIN1Q8WXD9 1431 aa28.7■■■□□ 2.19
RCN1-201ENST00000054950 TIMELESSQ9UNS1 1208 aa28.68■■■□□ 2.18
RCN1-201ENST00000054950 ANP32CO43423 234 aa28.67■■■□□ 2.18
RCN1-201ENST00000054950 POLA1P09884 1462 aaPredicted RBP28.66■■■□□ 2.18
RCN1-201ENST00000054950 FGD6Q6ZV73 1430 aa28.66■■■□□ 2.18
RCN1-201ENST00000054950 PTPRKQ15262 1439 aa28.65■■■□□ 2.18
RCN1-201ENST00000054950 TONSLQ96HA7 1378 aa28.65■■■□□ 2.18
RCN1-201ENST00000054950 CCDC18Q5T9S5 1454 aa28.63■■■□□ 2.17
RCN1-201ENST00000054950 EFCAB5A4FU69 1503 aa28.63■■■□□ 2.17
RCN1-201ENST00000054950 ABCA10Q8WWZ4 1543 aa28.63■■■□□ 2.17
RCN1-201ENST00000054950 DNMBPQ6XZF7 1577 aa28.61■■■□□ 2.17
RCN1-201ENST00000054950 TOPBP1Q92547 1522 aa28.61■■■□□ 2.17
RCN1-201ENST00000054950 CTTNBP2Q8WZ74 1663 aa28.6■■■□□ 2.17
RCN1-201ENST00000054950 CC2D2AQ9P2K1 1620 aa28.6■■■□□ 2.17
RCN1-201ENST00000054950 NESP48681 1621 aa28.59■■■□□ 2.17
RCN1-201ENST00000054950 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.59■■■□□ 2.17
RCN1-201ENST00000054950 CCER2I3L3R5 266 aa28.59■■■□□ 2.17
RCN1-201ENST00000054950 MTUS2Q5JR59 1369 aa28.59■■■□□ 2.17
RCN1-201ENST00000054950 AQRO60306 1485 aaKnown RBP eCLIP28.58■■■□□ 2.17
RCN1-201ENST00000054950 SNAPC4Q5SXM2 1469 aa28.57■■■□□ 2.16
RCN1-201ENST00000054950 NEFLP07196 543 aa28.56■■■□□ 2.16
RCN1-201ENST00000054950 ANP32EQ9BTT0 268 aa28.56■■■□□ 2.16
RCN1-201ENST00000054950 LRRIQ1Q96JM4 1722 aa28.54■■■□□ 2.16
RCN1-201ENST00000054950 PTPN23Q9H3S7 1636 aa28.53■■■□□ 2.16
RCN1-201ENST00000054950 FMN1Q68DA7 1419 aa28.53■■■□□ 2.16
RCN1-201ENST00000054950 CUL7Q14999 1698 aa28.52■■■□□ 2.16
RCN1-201ENST00000054950 HFM1A2PYH4 1435 aa28.51■■■□□ 2.15
RCN1-201ENST00000054950 UACAQ9BZF9 1416 aa28.5■■■□□ 2.15
RCN1-201ENST00000054950 NAIPQ13075 1403 aa28.47■■■□□ 2.15
RCN1-201ENST00000054950 NCOA2Q15596 1464 aa28.46■■■□□ 2.15
RCN1-201ENST00000054950 TDRD9Q8NDG6 1382 aaKnown RBP28.44■■■□□ 2.14
RCN1-201ENST00000054950 RBM19Q9Y4C8 960 aaKnown RBP28.41■■■□□ 2.14
RCN1-201ENST00000054950 MYOM3Q5VTT5 1437 aa28.41■■■□□ 2.14
RCN1-201ENST00000054950 KDM5BQ9UGL1 1544 aa28.41■■■□□ 2.14
RCN1-201ENST00000054950 RRP7BPQ9NSQ0 103 aa28.41■■■□□ 2.14
RCN1-201ENST00000054950 CHIC2Q9UKJ5 165 aa28.41■■■□□ 2.14
RCN1-201ENST00000054950 SAMD9Q5K651 1589 aa28.37■■■□□ 2.13
RCN1-201ENST00000054950 GRIN2BQ13224 1484 aa28.36■■■□□ 2.13
RCN1-201ENST00000054950 IRX6P78412 446 aaPredicted RBP28.36■■■□□ 2.13
RCN1-201ENST00000054950 HNRNPUQ00839 825 aaKnown RBP eCLIP28.36■■■□□ 2.13
RCN1-201ENST00000054950 URB2Q14146 1524 aaKnown RBP28.35■■■□□ 2.13
RCN1-201ENST00000054950 SUPT6HQ7KZ85 1726 aaKnown RBP28.32■■■□□ 2.12
RCN1-201ENST00000054950 MAGI3Q5TCQ9 1506 aa28.32■■■□□ 2.12
RCN1-201ENST00000054950 HSPA5P11021 654 aaKnown RBP28.31■■■□□ 2.12
RCN1-201ENST00000054950 WASHC2AQ641Q2 1341 aa28.31■■■□□ 2.12
RCN1-201ENST00000054950 DENND4BO75064 1496 aaPredicted RBP28.27■■■□□ 2.12
RCN1-201ENST00000054950 EHBP1L1Q8N3D4 1523 aa28.27■■■□□ 2.12
RCN1-201ENST00000054950 GAPVD1Q14C86 1478 aa28.26■■■□□ 2.11
RCN1-201ENST00000054950 ABCA5Q8WWZ7 1642 aa28.26■■■□□ 2.11
RCN1-201ENST00000054950 ARID3CA6NKF2 412 aa28.26■■■□□ 2.11
RCN1-201ENST00000054950 KDM6BO15054 1643 aa28.26■■■□□ 2.11
RCN1-201ENST00000054950 UGGT2Q9NYU1 1516 aa28.25■■■□□ 2.11
RCN1-201ENST00000054950 FOXD1Q16676 465 aa28.24■■■□□ 2.11
RCN1-201ENST00000054950 CCDC184Q52MB2 194 aa28.22■■■□□ 2.11
RCN1-201ENST00000054950 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
RCN1-201ENST00000054950 THOC2Q8NI27 1593 aaKnown RBP28.17■■■□□ 2.1
RCN1-201ENST00000054950 LAMC3Q9Y6N6 1575 aa28.15■■■□□ 2.1
RCN1-201ENST00000054950 C11orf95C9JLR9 678 aaPredicted RBP28.15■■■□□ 2.1
RCN1-201ENST00000054950 GCC2Q8IWJ2 1684 aa28.14■■■□□ 2.1
RCN1-201ENST00000054950 HECW1Q76N89 1606 aa28.13■■■□□ 2.09
RCN1-201ENST00000054950 EIF4G2P78344 907 aaKnown RBP eCLIP28.13■■■□□ 2.09
RCN1-201ENST00000054950 L3MBTL2Q969R5 705 aa28.12■■■□□ 2.09
RCN1-201ENST00000054950 MSH5O43196 834 aa28.12■■■□□ 2.09
RCN1-201ENST00000054950 MPHOSPH9Q99550 1183 aa28.11■■■□□ 2.09
RCN1-201ENST00000054950 CDK13Q14004 1512 aaKnown RBP28.1■■■□□ 2.09
RCN1-201ENST00000054950 DNAJC5BQ9UF47 199 aa28.1■■■□□ 2.09
RCN1-201ENST00000054950 TCOF1Q13428 1488 aaKnown RBP28.1■■■□□ 2.09
RCN1-201ENST00000054950 CNTLNQ9NXG0 1405 aa28.07■■■□□ 2.08
RCN1-201ENST00000054950 FAM9BQ8IZU0 186 aa28.06■■■□□ 2.08
RCN1-201ENST00000054950 EPRSP07814 1512 aaKnown RBP28.04■■■□□ 2.08
RCN1-201ENST00000054950 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
RCN1-201ENST00000054950 NBPF8Q3BBV2 869 aa28.02■■■□□ 2.08
RCN1-201ENST00000054950 CCDC7Q96M83 1385 aa27.99■■■□□ 2.07
RCN1-201ENST00000054950 PRKRIP1Q9H875 184 aaPredicted RBP27.99■■■□□ 2.07
RCN1-201ENST00000054950 CDK11AQ9UQ88 783 aaPredicted RBP27.98■■■□□ 2.07
RCN1-201ENST00000054950 MRS2Q9HD23 443 aa27.97■■■□□ 2.07
RCN1-201ENST00000054950 NCOA1Q15788 1441 aa27.96■■■□□ 2.07
RCN1-201ENST00000054950 AKNAQ7Z591 1439 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms