RNA–Protein interactions for RNA: ENSMUST00000168162.4

Pdgfra-202, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,834 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-202ENSMUST00000168162 Txndc2Q6P902 515 aa14.27□□□□□ -0.12
Pdgfra-202ENSMUST00000168162 Sox12Q04890 314 aa14.25□□□□□ -0.13
Pdgfra-202ENSMUST00000168162 Polr3glQ8R0C0 218 aa14.24□□□□□ -0.13
Pdgfra-202ENSMUST00000168162 Kif15Q6P9L6 1387 aa14.22□□□□□ -0.13
Pdgfra-202ENSMUST00000168162 Clstn1Q9EPL2 979 aa14.19□□□□□ -0.14
Pdgfra-202ENSMUST00000168162 Cdca7Q9D0M2 382 aa14.18□□□□□ -0.14
Pdgfra-202ENSMUST00000168162 Neurod2Q62414 383 aa14.17□□□□□ -0.14
Pdgfra-202ENSMUST00000168162 Cep164Q5DU05 1446 aa14.16□□□□□ -0.14
Pdgfra-202ENSMUST00000168162 Phf23Q8BSN5 401 aa14.14□□□□□ -0.15
Pdgfra-202ENSMUST00000168162 Stk24Q99KH8 431 aa14.13□□□□□ -0.15
Pdgfra-202ENSMUST00000168162 Slc5a4bQ91ZP4 660 aa14.13□□□□□ -0.15
Pdgfra-202ENSMUST00000168162 Ppp1r1bQ60829 194 aa14.12□□□□□ -0.15
Pdgfra-202ENSMUST00000168162 Pak3Q61036 559 aa14.11□□□□□ -0.15
Pdgfra-202ENSMUST00000168162 IqubQ8CDK3 788 aa14.11□□□□□ -0.15
Pdgfra-202ENSMUST00000168162 NrdcQ8BHG1 1161 aa14.1□□□□□ -0.15
Pdgfra-202ENSMUST00000168162 Ddx54Q8K4L0 874 aaKnown RBP14.1□□□□□ -0.15
Pdgfra-202ENSMUST00000168162 Ccdc180J3QNE4 1664 aa14.08□□□□□ -0.15
Pdgfra-202ENSMUST00000168162 Gtpbp6Q3U6U5 514 aa14.07□□□□□ -0.16
Pdgfra-202ENSMUST00000168162 Atf3Q60765 181 aa14.05□□□□□ -0.16
Pdgfra-202ENSMUST00000168162 Ppargc1bQ8VHJ7 1014 aa14.04□□□□□ -0.16
Pdgfra-202ENSMUST00000168162 Clstn2Q9ER65 966 aa14.02□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 Rrp7aQ9D1C9 280 aaKnown RBP14.01□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 Rsf1E9PWW9 1441 aaKnown RBP14□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 Trim26Q99PN3 545 aa14□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 Lemd3Q9WU40 921 aa13.99□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 Eif4g2Q62448 906 aaKnown RBP13.99□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 Arid3aQ62431 601 aa13.98□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 Apbb1Q9QXJ1 710 aa13.98□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 Klf15Q9EPW2 415 aa13.98□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 Exosc9Q9JHI7 438 aaKnown RBP13.98□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 Chic2Q9D9G3 165 aa13.97□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 Rad21Q61550 635 aaKnown RBP13.97□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 ArxO35085 564 aa13.97□□□□□ -0.17
Pdgfra-202ENSMUST00000168162 Kdm2aP59997 1161 aa13.95□□□□□ -0.18
Pdgfra-202ENSMUST00000168162 Evi5lH3BKQ3 813 aa13.95□□□□□ -0.18
Pdgfra-202ENSMUST00000168162 Sirt1Q923E4 737 aa13.95□□□□□ -0.18
Pdgfra-202ENSMUST00000168162 MycnP03966 462 aaKnown RBP13.93□□□□□ -0.18
Pdgfra-202ENSMUST00000168162 Ccdc18Q640L5 1455 aa13.93□□□□□ -0.18
Pdgfra-202ENSMUST00000168162 Pds5bQ4VA53 1446 aaKnown RBP13.92□□□□□ -0.18
Pdgfra-202ENSMUST00000168162 Srpk2O54781 681 aaKnown RBP13.91□□□□□ -0.18
Pdgfra-202ENSMUST00000168162 Zfp777B9EKF4 885 aa13.91□□□□□ -0.18
Pdgfra-202ENSMUST00000168162 Stra8P70278 393 aa13.89□□□□□ -0.19
Pdgfra-202ENSMUST00000168162 1700019A02RikA0A087WPV9 146 aa13.88□□□□□ -0.19
Pdgfra-202ENSMUST00000168162 Shroom4Q1W617 1475 aa13.88□□□□□ -0.19
Pdgfra-202ENSMUST00000168162 Zranb1Q7M760 708 aa13.88□□□□□ -0.19
Pdgfra-202ENSMUST00000168162 Stk26Q99JT2 416 aa13.87□□□□□ -0.19
Pdgfra-202ENSMUST00000168162 Ccar1Q8CH18 1146 aaKnown RBP13.87□□□□□ -0.19
Pdgfra-202ENSMUST00000168162 Stag3O70576 1240 aa13.86□□□□□ -0.19
Pdgfra-202ENSMUST00000168162 Rsph4aQ8BYM7 716 aa13.86□□□□□ -0.19
Pdgfra-202ENSMUST00000168162 Jph4Q80WT0 628 aa13.86□□□□□ -0.19
Pdgfra-202ENSMUST00000168162 NeflP08551 543 aa13.85□□□□□ -0.19
Pdgfra-202ENSMUST00000168162 MpndQ3TV65 487 aa13.83□□□□□ -0.19
Pdgfra-202ENSMUST00000168162 Tom1O88746 492 aa13.83□□□□□ -0.2
Pdgfra-202ENSMUST00000168162 Eif5bQ05D44 1216 aaKnown RBP13.81□□□□□ -0.2
Pdgfra-202ENSMUST00000168162 Znf316Q6PGE4 1016 aa13.81□□□□□ -0.2
Pdgfra-202ENSMUST00000168162 Taok2Q6ZQ29 1240 aa13.79□□□□□ -0.2
Pdgfra-202ENSMUST00000168162 Ap3b2Q9JME5 1082 aa13.79□□□□□ -0.2
Pdgfra-202ENSMUST00000168162 Gm20521D3Z5F7 333 aa13.78□□□□□ -0.2
Pdgfra-202ENSMUST00000168162 CenpbP27790 599 aa13.78□□□□□ -0.2
Pdgfra-202ENSMUST00000168162 Gimap5Q8BWF2 308 aa13.77□□□□□ -0.21
Pdgfra-202ENSMUST00000168162 Fgd1P52734 960 aa13.75□□□□□ -0.21
Pdgfra-202ENSMUST00000168162 4930567H17RikQ3V0K5 233 aa13.72□□□□□ -0.21
Pdgfra-202ENSMUST00000168162 Znf219Q6IQX8 726 aa13.72□□□□□ -0.21
Pdgfra-202ENSMUST00000168162 Mroh3A0A1D5RM54 893 aa13.72□□□□□ -0.21
Pdgfra-202ENSMUST00000168162 Slc4a1apE9PX68 744 aa13.7□□□□□ -0.22
Pdgfra-202ENSMUST00000168162 Soga1E1U8D0 1418 aa13.69□□□□□ -0.22
Pdgfra-202ENSMUST00000168162 Brd4Q9ESU6 1400 aaKnown RBP13.69□□□□□ -0.22
Pdgfra-202ENSMUST00000168162 Gpr162Q3UN16 588 aa13.69□□□□□ -0.22
Pdgfra-202ENSMUST00000168162 Rb1cc1Q9ESK9 1588 aa13.68□□□□□ -0.22
Pdgfra-202ENSMUST00000168162 Spryd3E9Q9B3 442 aa13.68□□□□□ -0.22
Pdgfra-202ENSMUST00000168162 Foxd1Q61345 456 aa13.67□□□□□ -0.22
Pdgfra-202ENSMUST00000168162 Iqcf3Q9D498 203 aa13.66□□□□□ -0.22
Pdgfra-202ENSMUST00000168162 Nkx1-1G3UXB3 402 aa13.66□□□□□ -0.22
Pdgfra-202ENSMUST00000168162 Tomm22Q9CPQ3 142 aa13.66□□□□□ -0.22
Pdgfra-202ENSMUST00000168162 Plin1Q8CGN5 517 aa13.65□□□□□ -0.22
Pdgfra-202ENSMUST00000168162 Nol10Q5RJG1 687 aaKnown RBP13.65□□□□□ -0.22
Pdgfra-202ENSMUST00000168162 SnrkQ8VDU5 748 aa13.64□□□□□ -0.23
Pdgfra-202ENSMUST00000168162 Pde3aQ9Z0X4 1141 aa13.64□□□□□ -0.23
Pdgfra-202ENSMUST00000168162 NacadQ5SWP3 1504 aa13.64□□□□□ -0.23
Pdgfra-202ENSMUST00000168162 Znf428Q8C1M2 176 aa13.62□□□□□ -0.23
Pdgfra-202ENSMUST00000168162 1700123L14RikQ3V2K7 440 aa13.62□□□□□ -0.23
Pdgfra-202ENSMUST00000168162 Rbm5Q91YE7 815 aaKnown RBP13.62□□□□□ -0.23
Pdgfra-202ENSMUST00000168162 Fyb1O35601 819 aa13.61□□□□□ -0.23
Pdgfra-202ENSMUST00000168162 Znf697Q569E7 569 aa13.6□□□□□ -0.23
Pdgfra-202ENSMUST00000168162 Cnga1P29974 684 aa13.59□□□□□ -0.23
Pdgfra-202ENSMUST00000168162 Crybg2B7ZCC2 1516 aa13.59□□□□□ -0.23
Pdgfra-202ENSMUST00000168162 Kif3bQ61771 747 aa13.59□□□□□ -0.23
Pdgfra-202ENSMUST00000168162 Zpr1Q62384 459 aa13.59□□□□□ -0.23
Pdgfra-202ENSMUST00000168162 Eva1cP58659 440 aa13.58□□□□□ -0.24
Pdgfra-202ENSMUST00000168162 Phldb1Q6PDH0 1371 aaKnown RBP13.57□□□□□ -0.24
Pdgfra-202ENSMUST00000168162 Rpap1Q80TE0 1409 aa13.56□□□□□ -0.24
Pdgfra-202ENSMUST00000168162 Mex3cQ05A36 652 aaKnown RBP13.56□□□□□ -0.24
Pdgfra-202ENSMUST00000168162 Plekhg5Q66T02 1073 aa13.56□□□□□ -0.24
Pdgfra-202ENSMUST00000168162 Ccdc85cE9Q6B2 420 aa13.55□□□□□ -0.24
Pdgfra-202ENSMUST00000168162 Tnnt1O88346 262 aa13.53□□□□□ -0.24
Pdgfra-202ENSMUST00000168162 TrhQ62361 256 aa13.53□□□□□ -0.24
Pdgfra-202ENSMUST00000168162 Emilin2Q8K482 1074 aa13.53□□□□□ -0.24
Pdgfra-202ENSMUST00000168162 Ripply1Q2WG77 201 aa13.52□□□□□ -0.25
Pdgfra-202ENSMUST00000168162 Acsbg1Q99PU5 721 aa13.51□□□□□ -0.25
Pdgfra-202ENSMUST00000168162 Wdhd1P59328 1117 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms