RNA–Protein interactions for RNA: ENSMUST00000168162.4

Pdgfra-202, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,834 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-202ENSMUST00000168162 Rhox8Q6VSS7 320 aa18.75■□□□□ 0.59
Pdgfra-202ENSMUST00000168162 Esf1Q3V1V3 845 aaKnown RBP17.5■□□□□ 0.39
Pdgfra-202ENSMUST00000168162 Zeb1Q64318 1117 aa17.48■□□□□ 0.39
Pdgfra-202ENSMUST00000168162 Plppr3Q7TPB0 716 aa17.38■□□□□ 0.37
Pdgfra-202ENSMUST00000168162 Ttbk1Q6PCN3 1308 aa17.32■□□□□ 0.36
Pdgfra-202ENSMUST00000168162 Ube2uB1AUC4 352 aa17.04■□□□□ 0.32
Pdgfra-202ENSMUST00000168162 Trim41Q5NCC3 630 aa17.04■□□□□ 0.32
Pdgfra-202ENSMUST00000168162 Cngb1E1AZ71 1325 aa16.86■□□□□ 0.29
Pdgfra-202ENSMUST00000168162 Ifnlr1Q8CGK5 535 aa16.84■□□□□ 0.29
Pdgfra-202ENSMUST00000168162 Pelp1Q9DBD5 1123 aaKnown RBP16.76■□□□□ 0.27
Pdgfra-202ENSMUST00000168162 Npm2Q80W85 207 aa16.73■□□□□ 0.27
Pdgfra-202ENSMUST00000168162 Il27Q8K3I6 234 aa16.67■□□□□ 0.26
Pdgfra-202ENSMUST00000168162 Gm13697A2AK42 830 aa16.63■□□□□ 0.25
Pdgfra-202ENSMUST00000168162 Ccdc136Q3TVA9 1136 aa16.44■□□□□ 0.22
Pdgfra-202ENSMUST00000168162 Abcc9P70170 1546 aa16.41■□□□□ 0.22
Pdgfra-202ENSMUST00000168162 Gm35339A0A140LHH9 1649 aa16.38■□□□□ 0.21
Pdgfra-202ENSMUST00000168162 Ehmt2Q9Z148 1263 aaKnown RBP16.34■□□□□ 0.21
Pdgfra-202ENSMUST00000168162 Myt1lP97500 1187 aa16.29■□□□□ 0.2
Pdgfra-202ENSMUST00000168162 Safb2Q80YR5 991 aaKnown RBP16.28■□□□□ 0.2
Pdgfra-202ENSMUST00000168162 Ecm2Q5FW85 670 aa16.26■□□□□ 0.19
Pdgfra-202ENSMUST00000168162 HrcG5E8J6 738 aa16.08■□□□□ 0.16
Pdgfra-202ENSMUST00000168162 Gm13695A2AK44 830 aa16.08■□□□□ 0.16
Pdgfra-202ENSMUST00000168162 Chic1Q8CBW7 227 aa16.05■□□□□ 0.16
Pdgfra-202ENSMUST00000168162 MyclP10166 368 aa16.04■□□□□ 0.16
Pdgfra-202ENSMUST00000168162 Gab3Q8BSM5 595 aa16.02■□□□□ 0.15
Pdgfra-202ENSMUST00000168162 Os9Q8K2C7 672 aa15.98■□□□□ 0.15
Pdgfra-202ENSMUST00000168162 Npm1Q61937 292 aaKnown RBP15.92■□□□□ 0.14
Pdgfra-202ENSMUST00000168162 Fkbp15Q6P9Q6 1216 aaKnown RBP15.9■□□□□ 0.14
Pdgfra-202ENSMUST00000168162 MlecQ6ZQI3 291 aaKnown RBP15.88■□□□□ 0.13
Pdgfra-202ENSMUST00000168162 Zbtb7cQ8VCZ7 619 aa15.87■□□□□ 0.13
Pdgfra-202ENSMUST00000168162 Atp1b4Q99ME6 356 aa15.85■□□□□ 0.13
Pdgfra-202ENSMUST00000168162 Ggt6Q6PDE7 497 aa15.72■□□□□ 0.11
Pdgfra-202ENSMUST00000168162 Ubl4bQ9CQ84 188 aa15.66■□□□□ 0.1
Pdgfra-202ENSMUST00000168162 Plekhg3Q4VAC9 1341 aa15.64■□□□□ 0.1
Pdgfra-202ENSMUST00000168162 Hnrnpul2Q00PI9 745 aaKnown RBP15.64■□□□□ 0.09
Pdgfra-202ENSMUST00000168162 DiexfQ8BTT6 772 aaKnown RBP15.63■□□□□ 0.09
Pdgfra-202ENSMUST00000168162 Ppp1r18Q8BQ30 594 aa15.62■□□□□ 0.09
Pdgfra-202ENSMUST00000168162 Ap3b1Q9Z1T1 1105 aa15.52■□□□□ 0.08
Pdgfra-202ENSMUST00000168162 Fbln2P37889 1221 aa15.51■□□□□ 0.07
Pdgfra-202ENSMUST00000168162 Slc24a1Q91WD8 1130 aa15.49■□□□□ 0.07
Pdgfra-202ENSMUST00000168162 NclP09405 707 aaKnown RBP15.48■□□□□ 0.07
Pdgfra-202ENSMUST00000168162 Erich6D3Z6S9 713 aa15.44■□□□□ 0.06
Pdgfra-202ENSMUST00000168162 Ppm1fQ8CGA0 452 aa15.43■□□□□ 0.06
Pdgfra-202ENSMUST00000168162 Hdac5Q9Z2V6 1113 aa15.4■□□□□ 0.06
Pdgfra-202ENSMUST00000168162 Ubap1lG3UW59 384 aa15.37■□□□□ 0.05
Pdgfra-202ENSMUST00000168162 Kif7B7ZNG0 1348 aa15.32■□□□□ 0.04
Pdgfra-202ENSMUST00000168162 P3h3Q8CG70 732 aa15.31■□□□□ 0.04
Pdgfra-202ENSMUST00000168162 Bcl11bQ99PV8 884 aa15.28■□□□□ 0.04
Pdgfra-202ENSMUST00000168162 Cyb5rlB1AS42 316 aa15.26■□□□□ 0.03
Pdgfra-202ENSMUST00000168162 Lmod2Q3UHZ5 550 aa15.2■□□□□ 0.02
Pdgfra-202ENSMUST00000168162 Neurod1Q60867 357 aa15.18■□□□□ 0.02
Pdgfra-202ENSMUST00000168162 Zcchc6Q5BLK4 1491 aaKnown RBP15.18■□□□□ 0.02
Pdgfra-202ENSMUST00000168162 Rpgrip1Q9EPQ2 1331 aa15.15■□□□□ 0.02
Pdgfra-202ENSMUST00000168162 Grwd1Q810D6 446 aaKnown RBP15.07■□□□□ 0
Pdgfra-202ENSMUST00000168162 Fam50aQ9WV03 339 aaKnown RBP15.05■□□□□ -0
Pdgfra-202ENSMUST00000168162 Prdm10Q3UTQ7 1184 aa15.01□□□□□ -0.01
Pdgfra-202ENSMUST00000168162 Q8BT18 775 aa14.99□□□□□ -0.01
Pdgfra-202ENSMUST00000168162 NischQ80TM9 1593 aa14.98□□□□□ -0.01
Pdgfra-202ENSMUST00000168162 Pip4k2bQ80XI4 416 aa14.97□□□□□ -0.01
Pdgfra-202ENSMUST00000168162 Wdr66E9Q743 1299 aa14.96□□□□□ -0.01
Pdgfra-202ENSMUST00000168162 Zbtb4Q5F293 982 aa14.9□□□□□ -0.02
Pdgfra-202ENSMUST00000168162 Las1lA2BE28 776 aaKnown RBP14.88□□□□□ -0.03
Pdgfra-202ENSMUST00000168162 Sf3b2Q3UJB0 878 aaKnown RBP14.86□□□□□ -0.03
Pdgfra-202ENSMUST00000168162 UbtfP25976 765 aaKnown RBP14.84□□□□□ -0.03
Pdgfra-202ENSMUST00000168162 Pabpn1Q8CCS6 302 aaKnown RBP14.82□□□□□ -0.04
Pdgfra-202ENSMUST00000168162 Chrna2Q91X60 512 aa14.82□□□□□ -0.04
Pdgfra-202ENSMUST00000168162 NgefQ8CHT1 710 aa14.76□□□□□ -0.05
Pdgfra-202ENSMUST00000168162 Kcnn1Q9EQR3 537 aa14.76□□□□□ -0.05
Pdgfra-202ENSMUST00000168162 Arid4bA2CG63 1314 aaKnown RBP14.75□□□□□ -0.05
Pdgfra-202ENSMUST00000168162 Ercc6F8VPZ5 1481 aa14.75□□□□□ -0.05
Pdgfra-202ENSMUST00000168162 Arid3cA6PWV5 409 aa14.74□□□□□ -0.05
Pdgfra-202ENSMUST00000168162 Ciz1Q8VEH2 845 aa14.69□□□□□ -0.06
Pdgfra-202ENSMUST00000168162 Kdm2bQ6P1G2 1309 aa14.68□□□□□ -0.06
Pdgfra-202ENSMUST00000168162 Egfem1Q8C088 590 aa14.67□□□□□ -0.06
Pdgfra-202ENSMUST00000168162 Arhgap27A2AB59 869 aa14.66□□□□□ -0.06
Pdgfra-202ENSMUST00000168162 Dmrt2Q8BG36 561 aa14.65□□□□□ -0.06
Pdgfra-202ENSMUST00000168162 Hs1bp3Q3TC93 395 aa14.64□□□□□ -0.07
Pdgfra-202ENSMUST00000168162 Irx6Q9ER75 438 aa14.6□□□□□ -0.07
Pdgfra-202ENSMUST00000168162 Anp32bQ9EST5 272 aaKnown RBP14.6□□□□□ -0.07
Pdgfra-202ENSMUST00000168162 Acin1Q9JIX8 1338 aaKnown RBP14.58□□□□□ -0.08
Pdgfra-202ENSMUST00000168162 Sugp2Q8CH09 1067 aa14.56□□□□□ -0.08
Pdgfra-202ENSMUST00000168162 Rtn4Q99P72 1162 aaKnown RBP14.51□□□□□ -0.09
Pdgfra-202ENSMUST00000168162 AknaQ80VW7 1404 aa14.51□□□□□ -0.09
Pdgfra-202ENSMUST00000168162 Senp3Q9EP97 568 aaKnown RBP14.49□□□□□ -0.09
Pdgfra-202ENSMUST00000168162 Skap1Q3UUV5 355 aa14.48□□□□□ -0.09
Pdgfra-202ENSMUST00000168162 ArsiQ32KI9 573 aa14.45□□□□□ -0.1
Pdgfra-202ENSMUST00000168162 Aplp2Q06335 707 aa14.44□□□□□ -0.1
Pdgfra-202ENSMUST00000168162 Znf326O88291 580 aa14.43□□□□□ -0.1
Pdgfra-202ENSMUST00000168162 Plagl1Q9JLQ4 704 aa14.43□□□□□ -0.1
Pdgfra-202ENSMUST00000168162 Cdk11bP24788 784 aaKnown RBP14.42□□□□□ -0.1
Pdgfra-202ENSMUST00000168162 Mapk8ip2Q9ERE9 830 aa14.42□□□□□ -0.1
Pdgfra-202ENSMUST00000168162 Zcwpw1Q6IR42 630 aa14.4□□□□□ -0.1
Pdgfra-202ENSMUST00000168162 Ythdc1E9Q5K9 736 aaKnown RBP14.4□□□□□ -0.1
Pdgfra-202ENSMUST00000168162 HdgfP51859 237 aaKnown RBP14.38□□□□□ -0.11
Pdgfra-202ENSMUST00000168162 Nlrp6Q91WS2 869 aa14.38□□□□□ -0.11
Pdgfra-202ENSMUST00000168162 Vsig10D3YX43 558 aa14.34□□□□□ -0.11
Pdgfra-202ENSMUST00000168162 Podxl2Q8CAE9 603 aa14.32□□□□□ -0.12
Pdgfra-202ENSMUST00000168162 Psme1P97371 249 aa14.29□□□□□ -0.12
Pdgfra-202ENSMUST00000168162 Rangap1P46061 589 aaKnown RBP14.29□□□□□ -0.12
Pdgfra-202ENSMUST00000168162 Amer1Q7TS75 1132 aa14.28□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms