RNA–Protein interactions for RNA: ENSMUST00000118242.7

Limch1-204, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Limch1, Length 5,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-204ENSMUST00000118242 Lmod2Q3UHZ5 550 aa16.28■□□□□ 0.2
Limch1-204ENSMUST00000118242 Polr3glQ8R0C0 218 aa16.27■□□□□ 0.2
Limch1-204ENSMUST00000118242 Ipo9Q91YE6 1041 aa16.26■□□□□ 0.19
Limch1-204ENSMUST00000118242 Trim30dE9PWL0 497 aa16.26■□□□□ 0.19
Limch1-204ENSMUST00000118242 Chic1Q8CBW7 227 aa16.23■□□□□ 0.19
Limch1-204ENSMUST00000118242 Ofd1Q80Z25 1017 aa16.22■□□□□ 0.19
Limch1-204ENSMUST00000118242 PtmaP26350 111 aa16.22■□□□□ 0.19
Limch1-204ENSMUST00000118242 Tcerg1Q8CGF7 1100 aaKnown RBP16.22■□□□□ 0.19
Limch1-204ENSMUST00000118242 Rad21Q61550 635 aaKnown RBP16.21■□□□□ 0.19
Limch1-204ENSMUST00000118242 Vsig10D3YX43 558 aa16.2■□□□□ 0.18
Limch1-204ENSMUST00000118242 P3h3Q8CG70 732 aa16.2■□□□□ 0.18
Limch1-204ENSMUST00000118242 Dnttip2Q8R2M2 758 aaKnown RBP16.2■□□□□ 0.18
Limch1-204ENSMUST00000118242 Taok2Q6ZQ29 1240 aa16.19■□□□□ 0.18
Limch1-204ENSMUST00000118242 Zbtb7cQ8VCZ7 619 aa16.19■□□□□ 0.18
Limch1-204ENSMUST00000118242 Plcb2A3KGF7 1181 aa16.18■□□□□ 0.18
Limch1-204ENSMUST00000118242 Rrp12Q6P5B0 1295 aaKnown RBP16.14■□□□□ 0.17
Limch1-204ENSMUST00000118242 Adam1bQ8R534 806 aa16.12■□□□□ 0.17
Limch1-204ENSMUST00000118242 Zbtb4Q5F293 982 aa16.1■□□□□ 0.17
Limch1-204ENSMUST00000118242 Nolc1E9Q5C9 702 aaKnown RBP16.07■□□□□ 0.16
Limch1-204ENSMUST00000118242 Dnai1Q8C0M8 701 aa16.06■□□□□ 0.16
Limch1-204ENSMUST00000118242 4933402E13RikQ9D4D2 429 aa16.06■□□□□ 0.16
Limch1-204ENSMUST00000118242 Spryd3E9Q9B3 442 aa16.05■□□□□ 0.16
Limch1-204ENSMUST00000118242 Slc4a3P16283 1227 aa16.02■□□□□ 0.16
Limch1-204ENSMUST00000118242 Mbd3Q9Z2D8 285 aaKnown RBP16.02■□□□□ 0.16
Limch1-204ENSMUST00000118242 MsnP26041 577 aaKnown RBP16.02■□□□□ 0.15
Limch1-204ENSMUST00000118242 Brd4Q9ESU6 1400 aaKnown RBP16.02■□□□□ 0.15
Limch1-204ENSMUST00000118242 Plcd4Q8K3R3 807 aa16■□□□□ 0.15
Limch1-204ENSMUST00000118242 Ddrgk1Q80WW9 315 aa15.99■□□□□ 0.15
Limch1-204ENSMUST00000118242 Pdcl3Q8BVF2 240 aa15.98■□□□□ 0.15
Limch1-204ENSMUST00000118242 Gm13697A2AK42 830 aa15.97■□□□□ 0.15
Limch1-204ENSMUST00000118242 Ifnlr1Q8CGK5 535 aa15.97■□□□□ 0.15
Limch1-204ENSMUST00000118242 Erich6bQ9D4S6 220 aa15.97■□□□□ 0.15
Limch1-204ENSMUST00000118242 Znf316Q6PGE4 1016 aa15.95■□□□□ 0.14
Limch1-204ENSMUST00000118242 Abcc8B2RUS7 1588 aa15.94■□□□□ 0.14
Limch1-204ENSMUST00000118242 Arid4bA2CG63 1314 aaKnown RBP15.94■□□□□ 0.14
Limch1-204ENSMUST00000118242 B4galnt3Q6L8S8 986 aa15.94■□□□□ 0.14
Limch1-204ENSMUST00000118242 Dbr1Q923B1 550 aa15.93■□□□□ 0.14
Limch1-204ENSMUST00000118242 Rtn4Q99P72 1162 aaKnown RBP15.92■□□□□ 0.14
Limch1-204ENSMUST00000118242 Prdm10Q3UTQ7 1184 aa15.89■□□□□ 0.13
Limch1-204ENSMUST00000118242 Map7O88735 730 aa15.88■□□□□ 0.13
Limch1-204ENSMUST00000118242 Ipo4Q8VI75 1082 aa15.88■□□□□ 0.13
Limch1-204ENSMUST00000118242 EspnQ9ET47 871 aa15.88■□□□□ 0.13
Limch1-204ENSMUST00000118242 VgfQ0VGU4 617 aa15.88■□□□□ 0.13
Limch1-204ENSMUST00000118242 BlmO88700 1416 aa15.87■□□□□ 0.13
Limch1-204ENSMUST00000118242 Map7d2A2AG50 781 aa15.87■□□□□ 0.13
Limch1-204ENSMUST00000118242 Znf326O88291 580 aa15.86■□□□□ 0.13
Limch1-204ENSMUST00000118242 Casc1Q6TDU8 730 aa15.86■□□□□ 0.13
Limch1-204ENSMUST00000118242 Cwc22Q8C5N3 908 aaKnown RBP15.85■□□□□ 0.13
Limch1-204ENSMUST00000118242 Chmp5Q9D7S9 219 aa15.85■□□□□ 0.13
Limch1-204ENSMUST00000118242 Rangap1P46061 589 aaKnown RBP15.83■□□□□ 0.12
Limch1-204ENSMUST00000118242 Rrp9Q91WM3 475 aaKnown RBP15.82■□□□□ 0.12
Limch1-204ENSMUST00000118242 BccipQ9CWI3 316 aa15.82■□□□□ 0.12
Limch1-204ENSMUST00000118242 Fbxo2Q80UW2 297 aa15.82■□□□□ 0.12
Limch1-204ENSMUST00000118242 ChgaP26339 463 aaKnown RBP15.81■□□□□ 0.12
Limch1-204ENSMUST00000118242 Mre11Q61216 706 aa15.8■□□□□ 0.12
Limch1-204ENSMUST00000118242 Apbb1Q9QXJ1 710 aa15.8■□□□□ 0.12
Limch1-204ENSMUST00000118242 Ipo8Q7TMY7 1010 aa15.8■□□□□ 0.12
Limch1-204ENSMUST00000118242 Calcoco2A2A6M5 331 aa15.8■□□□□ 0.12
Limch1-204ENSMUST00000118242 Becn1O88597 448 aa15.8■□□□□ 0.12
Limch1-204ENSMUST00000118242 Chic2Q9D9G3 165 aa15.79■□□□□ 0.12
Limch1-204ENSMUST00000118242 PtmsQ9D0J8 101 aaKnown RBP15.79■□□□□ 0.12
Limch1-204ENSMUST00000118242 Erich6D3Z6S9 713 aa15.78■□□□□ 0.12
Limch1-204ENSMUST00000118242 Rwdd1Q9CQK7 243 aa15.78■□□□□ 0.12
Limch1-204ENSMUST00000118242 Trim26Q99PN3 545 aa15.77■□□□□ 0.12
Limch1-204ENSMUST00000118242 Fgd1P52734 960 aa15.76■□□□□ 0.11
Limch1-204ENSMUST00000118242 Wwc2Q6NXJ0 1187 aa15.76■□□□□ 0.11
Limch1-204ENSMUST00000118242 Ush1cQ9ES64 910 aa15.76■□□□□ 0.11
Limch1-204ENSMUST00000118242 Setd5Q5XJV7 1441 aa15.74■□□□□ 0.11
Limch1-204ENSMUST00000118242 Gm973E9Q295 1059 aa15.73■□□□□ 0.11
Limch1-204ENSMUST00000118242 Gtf2a1Q99PM3 378 aa15.73■□□□□ 0.11
Limch1-204ENSMUST00000118242 KnstrnQ9D9Z1 312 aaKnown RBP15.72■□□□□ 0.11
Limch1-204ENSMUST00000118242 Mapk8ip3Q9ESN9 1337 aa15.72■□□□□ 0.11
Limch1-204ENSMUST00000118242 SlkO54988 1233 aa15.71■□□□□ 0.11
Limch1-204ENSMUST00000118242 Kiaa0754Q69ZZ9 979 aa15.71■□□□□ 0.11
Limch1-204ENSMUST00000118242 Npm1Q61937 292 aaKnown RBP15.7■□□□□ 0.1
Limch1-204ENSMUST00000118242 Chmp4bQ9D8B3 224 aaKnown RBP15.69■□□□□ 0.1
Limch1-204ENSMUST00000118242 Rgl3Q3UYI5 709 aa15.67■□□□□ 0.1
Limch1-204ENSMUST00000118242 Gm13695A2AK44 830 aa15.67■□□□□ 0.1
Limch1-204ENSMUST00000118242 Exoc6Q8R313 802 aa15.67■□□□□ 0.1
Limch1-204ENSMUST00000118242 Card11Q8CIS0 1159 aa15.66■□□□□ 0.1
Limch1-204ENSMUST00000118242 Rb1cc1Q9ESK9 1588 aa15.66■□□□□ 0.1
Limch1-204ENSMUST00000118242 RdxP26043 583 aaKnown RBP15.66■□□□□ 0.1
Limch1-204ENSMUST00000118242 Tpm2P58774 284 aa15.65■□□□□ 0.1
Limch1-204ENSMUST00000118242 Mia2Q91ZV0 1396 aa15.65■□□□□ 0.1
Limch1-204ENSMUST00000118242 IbspQ61711 324 aa15.65■□□□□ 0.1
Limch1-204ENSMUST00000118242 Armcx1Q9CX83 456 aa15.65■□□□□ 0.1
Limch1-204ENSMUST00000118242 Neurod2Q62414 383 aa15.64■□□□□ 0.09
Limch1-204ENSMUST00000118242 Trim30aP15533 496 aa15.64■□□□□ 0.09
Limch1-204ENSMUST00000118242 Clstn2Q9ER65 966 aa15.64■□□□□ 0.09
Limch1-204ENSMUST00000118242 Eea1Q8BL66 1411 aa15.63■□□□□ 0.09
Limch1-204ENSMUST00000118242 Fhad1A6PWD2 1420 aa15.63■□□□□ 0.09
Limch1-204ENSMUST00000118242 Sart3Q9JLI8 962 aaKnown RBP15.61■□□□□ 0.09
Limch1-204ENSMUST00000118242 Mak16Q8BGS0 296 aaKnown RBP15.61■□□□□ 0.09
Limch1-204ENSMUST00000118242 Golga3P55937 1487 aa15.61■□□□□ 0.09
Limch1-204ENSMUST00000118242 Hspa5P20029 655 aaKnown RBP15.6■□□□□ 0.09
Limch1-204ENSMUST00000118242 CntlnA2AM05 1397 aa15.6■□□□□ 0.09
Limch1-204ENSMUST00000118242 Gm6268A2A3U9 297 aa15.59■□□□□ 0.09
Limch1-204ENSMUST00000118242 Rsf1E9PWW9 1441 aaKnown RBP15.59■□□□□ 0.09
Limch1-204ENSMUST00000118242 Gm35339A0A140LHH9 1649 aa15.58■□□□□ 0.09
Limch1-204ENSMUST00000118242 Atp1b4Q99ME6 356 aa15.58■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms