RNA–Protein interactions for RNA: ENSMUST00000118242.7

Limch1-204, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Limch1, Length 5,050 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-204ENSMUST00000118242 Rpgrip1Q9EPQ2 1331 aa21.07■□□□□ 0.96
Limch1-204ENSMUST00000118242 Rhox8Q6VSS7 320 aa20.7■□□□□ 0.9
Limch1-204ENSMUST00000118242 Las1lA2BE28 776 aaKnown RBP20.36■□□□□ 0.85
Limch1-204ENSMUST00000118242 Cngb1E1AZ71 1325 aa20.04■□□□□ 0.8
Limch1-204ENSMUST00000118242 Ehmt2Q9Z148 1263 aaKnown RBP19.53■□□□□ 0.72
Limch1-204ENSMUST00000118242 Pelp1Q9DBD5 1123 aaKnown RBP19.5■□□□□ 0.71
Limch1-204ENSMUST00000118242 Myt1Q8CFC2 1127 aa19.32■□□□□ 0.68
Limch1-204ENSMUST00000118242 CenpbP27790 599 aa19.3■□□□□ 0.68
Limch1-204ENSMUST00000118242 Acin1Q9JIX8 1338 aaKnown RBP19.23■□□□□ 0.67
Limch1-204ENSMUST00000118242 Wdr66E9Q743 1299 aa19.12■□□□□ 0.65
Limch1-204ENSMUST00000118242 Zeb1Q64318 1117 aa19.06■□□□□ 0.64
Limch1-204ENSMUST00000118242 Pcgf6Q99NA9 353 aa18.85■□□□□ 0.61
Limch1-204ENSMUST00000118242 Amer1Q7TS75 1132 aa18.83■□□□□ 0.61
Limch1-204ENSMUST00000118242 NefmP08553 848 aa18.64■□□□□ 0.57
Limch1-204ENSMUST00000118242 DiexfQ8BTT6 772 aaKnown RBP18.6■□□□□ 0.57
Limch1-204ENSMUST00000118242 Cdk11bP24788 784 aaKnown RBP18.44■□□□□ 0.54
Limch1-204ENSMUST00000118242 Stra8P70278 393 aa18.41■□□□□ 0.54
Limch1-204ENSMUST00000118242 Ccdc136Q3TVA9 1136 aa18.31■□□□□ 0.52
Limch1-204ENSMUST00000118242 Ccdc180J3QNE4 1664 aa18.29■□□□□ 0.52
Limch1-204ENSMUST00000118242 Tnnt3Q9QZ47 272 aa18.26■□□□□ 0.51
Limch1-204ENSMUST00000118242 Trim41Q5NCC3 630 aa18.26■□□□□ 0.51
Limch1-204ENSMUST00000118242 Supt5hO55201 1082 aaKnown RBP18.24■□□□□ 0.51
Limch1-204ENSMUST00000118242 Rtl5Q5DTT4 599 aa18.24■□□□□ 0.51
Limch1-204ENSMUST00000118242 Ttbk1Q6PCN3 1308 aa18.19■□□□□ 0.5
Limch1-204ENSMUST00000118242 Nop58Q6DFW4 536 aaKnown RBP18.17■□□□□ 0.5
Limch1-204ENSMUST00000118242 Gab3Q8BSM5 595 aa18.17■□□□□ 0.5
Limch1-204ENSMUST00000118242 4930567H17RikQ3V0K5 233 aa18.06■□□□□ 0.48
Limch1-204ENSMUST00000118242 HrcG5E8J6 738 aa18.06■□□□□ 0.48
Limch1-204ENSMUST00000118242 4933416C03RikQ3V063 378 aa18.05■□□□□ 0.48
Limch1-204ENSMUST00000118242 Rtl1Q7M732 1744 aa18.01■□□□□ 0.47
Limch1-204ENSMUST00000118242 Ube2uB1AUC4 352 aa17.96■□□□□ 0.47
Limch1-204ENSMUST00000118242 Neurod1Q60867 357 aa17.94■□□□□ 0.46
Limch1-204ENSMUST00000118242 UbtfP25976 765 aaKnown RBP17.86■□□□□ 0.45
Limch1-204ENSMUST00000118242 Esf1Q3V1V3 845 aaKnown RBP17.82■□□□□ 0.44
Limch1-204ENSMUST00000118242 Slc24a1Q91WD8 1130 aa17.82■□□□□ 0.44
Limch1-204ENSMUST00000118242 Aplp2Q06335 707 aa17.81■□□□□ 0.44
Limch1-204ENSMUST00000118242 Anks4bQ8K3X6 423 aa17.8■□□□□ 0.44
Limch1-204ENSMUST00000118242 Anp32aO35381 247 aa17.75■□□□□ 0.43
Limch1-204ENSMUST00000118242 NischQ80TM9 1593 aa17.72■□□□□ 0.43
Limch1-204ENSMUST00000118242 Npm2Q80W85 207 aa17.72■□□□□ 0.43
Limch1-204ENSMUST00000118242 Myt1lP97500 1187 aa17.7■□□□□ 0.42
Limch1-204ENSMUST00000118242 Csrnp3P59055 597 aa17.69■□□□□ 0.42
Limch1-204ENSMUST00000118242 ClspnQ80YR7 1315 aa17.56■□□□□ 0.4
Limch1-204ENSMUST00000118242 NrdcQ8BHG1 1161 aa17.54■□□□□ 0.4
Limch1-204ENSMUST00000118242 Ppargc1bQ8VHJ7 1014 aa17.52■□□□□ 0.4
Limch1-204ENSMUST00000118242 TonslQ6NZL6 1363 aa17.52■□□□□ 0.4
Limch1-204ENSMUST00000118242 NeflP08551 543 aa17.51■□□□□ 0.39
Limch1-204ENSMUST00000118242 Eif5bQ05D44 1216 aaKnown RBP17.47■□□□□ 0.39
Limch1-204ENSMUST00000118242 1700123L14RikQ3V2K7 440 aa17.45■□□□□ 0.38
Limch1-204ENSMUST00000118242 Mier1Q5UAK0 511 aa17.45■□□□□ 0.38
Limch1-204ENSMUST00000118242 Gm38655A0A286YDK6 273 aa17.43■□□□□ 0.38
Limch1-204ENSMUST00000118242 DaxxO35613 739 aa17.41■□□□□ 0.38
Limch1-204ENSMUST00000118242 Sall2Q9QX96 1004 aa17.39■□□□□ 0.37
Limch1-204ENSMUST00000118242 Bcl11aQ9QYE3 773 aa17.39■□□□□ 0.37
Limch1-204ENSMUST00000118242 NclP09405 707 aaKnown RBP17.37■□□□□ 0.37
Limch1-204ENSMUST00000118242 Ccdc9Q8VC31 543 aaKnown RBP17.37■□□□□ 0.37
Limch1-204ENSMUST00000118242 Dcaf1Q80TR8 1506 aa17.34■□□□□ 0.37
Limch1-204ENSMUST00000118242 Anp32bQ9EST5 272 aaKnown RBP17.28■□□□□ 0.36
Limch1-204ENSMUST00000118242 Ythdc1E9Q5K9 736 aaKnown RBP17.11■□□□□ 0.33
Limch1-204ENSMUST00000118242 Fam71e1A1L3C1 212 aa17.11■□□□□ 0.33
Limch1-204ENSMUST00000118242 Hsp90aa1P07901 733 aaKnown RBP17.1■□□□□ 0.33
Limch1-204ENSMUST00000118242 Calr4Q3TQS0 420 aa17.07■□□□□ 0.32
Limch1-204ENSMUST00000118242 Fam50aQ9WV03 339 aaKnown RBP17.02■□□□□ 0.32
Limch1-204ENSMUST00000118242 Ppp4r2Q0VGB7 417 aa16.99■□□□□ 0.31
Limch1-204ENSMUST00000118242 Mapk8ip2Q9ERE9 830 aa16.98■□□□□ 0.31
Limch1-204ENSMUST00000118242 Wdr43Q6ZQL4 677 aaKnown RBP16.94■□□□□ 0.3
Limch1-204ENSMUST00000118242 Ccdc27Q3V036 639 aa16.89■□□□□ 0.29
Limch1-204ENSMUST00000118242 Irx3P81067 507 aa16.82■□□□□ 0.28
Limch1-204ENSMUST00000118242 Ap3b1Q9Z1T1 1105 aa16.82■□□□□ 0.28
Limch1-204ENSMUST00000118242 Cep164Q5DU05 1446 aa16.68■□□□□ 0.26
Limch1-204ENSMUST00000118242 Upf2A2AT37 1269 aaKnown RBP16.65■□□□□ 0.26
Limch1-204ENSMUST00000118242 Trim44Q9QXA7 346 aa16.59■□□□□ 0.25
Limch1-204ENSMUST00000118242 Aebp2Q9Z248 504 aaKnown RBP16.59■□□□□ 0.25
Limch1-204ENSMUST00000118242 Plekhg3Q4VAC9 1341 aa16.58■□□□□ 0.25
Limch1-204ENSMUST00000118242 ArxO35085 564 aa16.58■□□□□ 0.24
Limch1-204ENSMUST00000118242 Eid3Q3V124 375 aa16.57■□□□□ 0.24
Limch1-204ENSMUST00000118242 CanxP35564 591 aaKnown RBP16.56■□□□□ 0.24
Limch1-204ENSMUST00000118242 Zcchc6Q5BLK4 1491 aaKnown RBP16.55■□□□□ 0.24
Limch1-204ENSMUST00000118242 Abcc9P70170 1546 aa16.55■□□□□ 0.24
Limch1-204ENSMUST00000118242 Lmod3E9QA62 571 aa16.54■□□□□ 0.24
Limch1-204ENSMUST00000118242 Hnrnpul2Q00PI9 745 aaKnown RBP16.54■□□□□ 0.24
Limch1-204ENSMUST00000118242 CatipB9EKE5 520 aa16.53■□□□□ 0.24
Limch1-204ENSMUST00000118242 SafbD3YXK2 937 aaKnown RBP16.51■□□□□ 0.23
Limch1-204ENSMUST00000118242 AU015836B2RUM3 263 aa16.49■□□□□ 0.23
Limch1-204ENSMUST00000118242 Il27Q8K3I6 234 aa16.49■□□□□ 0.23
Limch1-204ENSMUST00000118242 Pknox2Q8BG99 474 aa16.47■□□□□ 0.23
Limch1-204ENSMUST00000118242 Ccer2J3QPU5 274 aa16.46■□□□□ 0.23
Limch1-204ENSMUST00000118242 Os9Q8K2C7 672 aa16.46■□□□□ 0.23
Limch1-204ENSMUST00000118242 Mrs2Q5NCE8 434 aa16.46■□□□□ 0.22
Limch1-204ENSMUST00000118242 Htatsf1Q8BGC0 757 aa16.45■□□□□ 0.22
Limch1-204ENSMUST00000118242 PrkcshO08795 521 aa16.44■□□□□ 0.22
Limch1-204ENSMUST00000118242 Gtf3c3Q3TMP1 882 aa16.43■□□□□ 0.22
Limch1-204ENSMUST00000118242 Tnnt2P50752 301 aa16.38■□□□□ 0.21
Limch1-204ENSMUST00000118242 DekQ7TNV0 380 aaKnown RBP16.37■□□□□ 0.21
Limch1-204ENSMUST00000118242 Hsp90ab1P11499 724 aaKnown RBP16.35■□□□□ 0.21
Limch1-204ENSMUST00000118242 Ppm1gQ61074 542 aa16.35■□□□□ 0.21
Limch1-204ENSMUST00000118242 Clip1Q922J3 1391 aa16.35■□□□□ 0.21
Limch1-204ENSMUST00000118242 Hdac5Q9Z2V6 1113 aa16.34■□□□□ 0.21
Limch1-204ENSMUST00000118242 Nlrp6Q91WS2 869 aa16.33■□□□□ 0.2
Limch1-204ENSMUST00000118242 Supt16hQ920B9 1047 aa16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 89.3 ms