RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Trav14-2A0A075B694 121 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Igkv5-43A0A0B4J1J2 115 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Trav12d-1A0N8R0 115 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 CckP09240 115 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Prss46Q5M8S2 314 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Clec14aQ8VCP9 459 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Rpp25Q91WE3 199 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Ccdc88cQ6VGS5 2009 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Ms4a12A0A087WSB9 263 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 BikO70337 150 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Tcrg-V1P06325 135 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Q149G0 166 aaKnown RBP6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 VwceQ3U515 929 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Defb21Q8C5Z4 100 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Mrps11Q9DCA2 191 aaKnown RBP6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Rnf114Q9ET26 229 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Crybb3Q9JJU9 211 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Shisal2aA2A9G7 189 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Awat1A2ADU9 328 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Smim20D3Z7Q2 69 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 CtsgP28293 261 aa6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Rpl23P62830 140 aaKnown RBP6.47□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Trav4-4-dv10A0A075B651 110 aa6.46□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Pla2g3Q8BZT7 504 aa6.46□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Tm4sf4Q91XD3 202 aa6.46□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Tmem170aQ9D342 144 aa6.46□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Slc25a39Q9D8K8 359 aa6.46□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 MNCb-2875Q9DCB3 74 aa6.46□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 PerpQ9JK95 193 aa6.46□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Akap11E9Q777 1895 aa6.46□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Nhsl1Q8CAF4 1587 aa6.46□□□□□ -1.37
Pcdh9-204ENSMUST00000193901 Ighv9-3A0A0B4J1J5 117 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Gm20403G3UYB0 123 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Il12rb1Q60837 738 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 SinhcafQ8C8M1 221 aaKnown RBP6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 4930447A16RikQ9D5F6 132 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Srxn1Q9D975 136 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Il17bQ9QXT6 180 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Gm13030A2APQ6 143 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Defb35Q8R2I3 63 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Q9D4G1 230 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Adamtsl1Q8BLI0 1745 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Vmo1Q5SXG7 201 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Atp6v0bQ91V37 205 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Spata25Q9DA57 226 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Ighv5-6A0A075B5Q0 117 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Igkv12-46A0A140T8P6 115 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Tmem243B2RVB9 118 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 ApelaP0DMC4 54 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 C1qaP98086 245 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Treml2Q2LA85 329 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Znf260Q62513 407 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Foxl1Q64731 336 aa6.46□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Ighv1-22A0A075B5U7 117 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Zfp951A0A087WRH0 451 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Ccl11P48298 97 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 H1fxQ80ZM5 188 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Mrpl27Q99N92 148 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 MplkipQ9D011 178 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Rpl34Q9D1R9 117 aaKnown RBP6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Igkv4-69A0A0B4J1I6 116 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Saa2P05367 122 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Susd3Q9D176 269 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Col2a1P28481 1487 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 E430018J23RikE9PZQ8 461 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 PspnO70300 156 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Fgf11P70378 225 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 AdoQ6PDY2 256 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Lypd1Q8BLC3 141 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Prr15Q9D1T5 122 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Igkv5-39A0A0G2JDV4 115 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Ighv8-9A0A0G2JET1 119 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Pate1E9Q658 125 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Spint5J3KMK8 105 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Zfp2P08043 459 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 MycbQ6P8Z1 170 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Sfxn3Q91V61 321 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Zdhhc16Q9ESG8 361 aa6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Marf1Q8BJ34 1730 aaKnown RBP6.45□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Ighv7-3A0A075B5R2 120 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Igkv6-29A0A0G2JEI6 115 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 E130218I03RikA0A0U1RNU5 63 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Gm20696H3BJN7 74 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Gm26727M0QWT1 121 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Smad7O35253 426 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 BadQ61337 204 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Gm15085Q62012 449 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Ube2cQ9D1C1 179 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Igfbp3P47878 292 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Ighv1-34A0A075B5V2 117 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Trav7n-4A0A075B620 113 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 H2al1bA0A087WP11 105 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 P01661 131 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 P01662 111 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 P01663 111 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Jsrp1Q3MI48 332 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Spsb3Q571F5 354 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Slc25a35Q5SWT3 300 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Gatd1Q8BFQ8 220 aa6.44□□□□□ -1.38
Pcdh9-204ENSMUST00000193901 Rnf125Q9D9R0 233 aa6.44□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms