Protein–RNA interactions for Protein: A0A140T8P6

Igkv12-46, Immunoglobulin kappa variable 12-46 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv12-46A0A140T8P6 Gm25239-201ENSMUST00000174915 86 ntBASIC37.39■■■■□ 3.58
Igkv12-46A0A140T8P6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
Igkv12-46A0A140T8P6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Igkv12-46A0A140T8P6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Igkv12-46A0A140T8P6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Igkv12-46A0A140T8P6 Gm15042-201ENSMUST00000120212 883 ntBASIC32.98■■■□□ 2.87
Igkv12-46A0A140T8P6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
Igkv12-46A0A140T8P6 Gm15045-201ENSMUST00000117359 883 ntBASIC32.36■■■□□ 2.77
Igkv12-46A0A140T8P6 Gm24109-201ENSMUST00000175489 103 ntBASIC32.29■■■□□ 2.76
Igkv12-46A0A140T8P6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Igkv12-46A0A140T8P6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Igkv12-46A0A140T8P6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Igkv12-46A0A140T8P6 Psd-208ENSMUST00000224556 2034 ntBASIC31.36■■■□□ 2.61
Igkv12-46A0A140T8P6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.27■■■□□ 2.6
Igkv12-46A0A140T8P6 Gm23366-201ENSMUST00000175022 89 ntBASIC31.23■■■□□ 2.59
Igkv12-46A0A140T8P6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Igkv12-46A0A140T8P6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Igkv12-46A0A140T8P6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Igkv12-46A0A140T8P6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Igkv12-46A0A140T8P6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Igkv12-46A0A140T8P6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Igkv12-46A0A140T8P6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Igkv12-46A0A140T8P6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Igkv12-46A0A140T8P6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
Igkv12-46A0A140T8P6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Igkv12-46A0A140T8P6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.53■■■□□ 2.48
Igkv12-46A0A140T8P6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Igkv12-46A0A140T8P6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Igkv12-46A0A140T8P6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Igkv12-46A0A140T8P6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Igkv12-46A0A140T8P6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.24■■■□□ 2.43
Igkv12-46A0A140T8P6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Igkv12-46A0A140T8P6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.08■■■□□ 2.41
Igkv12-46A0A140T8P6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Igkv12-46A0A140T8P6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.85■■■□□ 2.37
Igkv12-46A0A140T8P6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Igkv12-46A0A140T8P6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Igkv12-46A0A140T8P6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Igkv12-46A0A140T8P6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Igkv12-46A0A140T8P6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.53■■■□□ 2.32
Igkv12-46A0A140T8P6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Igkv12-46A0A140T8P6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Igkv12-46A0A140T8P6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.51■■■□□ 2.31
Igkv12-46A0A140T8P6 Gm25238-201ENSMUST00000174914 89 ntBASIC29.42■■■□□ 2.3
Igkv12-46A0A140T8P6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Igkv12-46A0A140T8P6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Igkv12-46A0A140T8P6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Igkv12-46A0A140T8P6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.29■■■□□ 2.28
Igkv12-46A0A140T8P6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.29■■■□□ 2.28
Igkv12-46A0A140T8P6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Igkv12-46A0A140T8P6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Igkv12-46A0A140T8P6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Igkv12-46A0A140T8P6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Igkv12-46A0A140T8P6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Igkv12-46A0A140T8P6 Gm10524-201ENSMUST00000181931 1893 ntBASIC29■■■□□ 2.23
Igkv12-46A0A140T8P6 Gm27325-201ENSMUST00000175467 74 ntBASIC28.98■■■□□ 2.23
Igkv12-46A0A140T8P6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.9■■■□□ 2.22
Igkv12-46A0A140T8P6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Igkv12-46A0A140T8P6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Igkv12-46A0A140T8P6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
Igkv12-46A0A140T8P6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Igkv12-46A0A140T8P6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Igkv12-46A0A140T8P6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.75■■■□□ 2.19
Igkv12-46A0A140T8P6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.75■■■□□ 2.19
Igkv12-46A0A140T8P6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Igkv12-46A0A140T8P6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Igkv12-46A0A140T8P6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Igkv12-46A0A140T8P6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Igkv12-46A0A140T8P6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Igkv12-46A0A140T8P6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Igkv12-46A0A140T8P6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.54■■■□□ 2.16
Igkv12-46A0A140T8P6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.53■■■□□ 2.16
Igkv12-46A0A140T8P6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Igkv12-46A0A140T8P6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Igkv12-46A0A140T8P6 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.5■■■□□ 2.15
Igkv12-46A0A140T8P6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.48■■■□□ 2.15
Igkv12-46A0A140T8P6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Igkv12-46A0A140T8P6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Igkv12-46A0A140T8P6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Igkv12-46A0A140T8P6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
Igkv12-46A0A140T8P6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.26■■■□□ 2.12
Igkv12-46A0A140T8P6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Igkv12-46A0A140T8P6 Rab21-202ENSMUST00000218831 843 ntBASIC28.22■■■□□ 2.11
Igkv12-46A0A140T8P6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Igkv12-46A0A140T8P6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Igkv12-46A0A140T8P6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Igkv12-46A0A140T8P6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.07■■■□□ 2.08
Igkv12-46A0A140T8P6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Igkv12-46A0A140T8P6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.98■■■□□ 2.07
Igkv12-46A0A140T8P6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
Igkv12-46A0A140T8P6 Gm25262-201ENSMUST00000174934 133 ntBASIC27.95■■■□□ 2.06
Igkv12-46A0A140T8P6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Igkv12-46A0A140T8P6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Igkv12-46A0A140T8P6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.89■■■□□ 2.06
Igkv12-46A0A140T8P6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Igkv12-46A0A140T8P6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Igkv12-46A0A140T8P6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Igkv12-46A0A140T8P6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Igkv12-46A0A140T8P6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.83■■■□□ 2.04
Igkv12-46A0A140T8P6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms