Protein–RNA interactions for Protein: A0A0G2JEI6

Igkv6-29, Immunoglobulin kappa chain variable 6-29 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-29A0A0G2JEI6 Gm25239-201ENSMUST00000174915 86 ntBASIC38,85■■■■□ 3,81
Igkv6-29A0A0G2JEI6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35,9■■■■□ 3,34
Igkv6-29A0A0G2JEI6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35,42■■■■□ 3,26
Igkv6-29A0A0G2JEI6 Gm15042-201ENSMUST00000120212 883 ntBASIC33,98■■■■□ 3,03
Igkv6-29A0A0G2JEI6 Gm24109-201ENSMUST00000175489 103 ntBASIC33,68■■■□□ 2,98
Igkv6-29A0A0G2JEI6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33,27■■■□□ 2,92
Igkv6-29A0A0G2JEI6 Gm15045-201ENSMUST00000117359 883 ntBASIC33,25■■■□□ 2,91
Igkv6-29A0A0G2JEI6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32,94■■■□□ 2,86
Igkv6-29A0A0G2JEI6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32,82■■■□□ 2,84
Igkv6-29A0A0G2JEI6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32,75■■■□□ 2,83
Igkv6-29A0A0G2JEI6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32,61■■■□□ 2,81
Igkv6-29A0A0G2JEI6 Gm23366-201ENSMUST00000175022 89 ntBASIC32,46■■■□□ 2,79
Igkv6-29A0A0G2JEI6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32,29■■■□□ 2,76
Igkv6-29A0A0G2JEI6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32,26■■■□□ 2,75
Igkv6-29A0A0G2JEI6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31,73■■■□□ 2,67
Igkv6-29A0A0G2JEI6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31,55■■■□□ 2,64
Igkv6-29A0A0G2JEI6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31,41■■■□□ 2,62
Igkv6-29A0A0G2JEI6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31,39■■■□□ 2,62
Igkv6-29A0A0G2JEI6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31,35■■■□□ 2,61
Igkv6-29A0A0G2JEI6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31,35■■■□□ 2,61
Igkv6-29A0A0G2JEI6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31,21■■■□□ 2,59
Igkv6-29A0A0G2JEI6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31,15■■■□□ 2,58
Igkv6-29A0A0G2JEI6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31,01■■■□□ 2,55
Igkv6-29A0A0G2JEI6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31,01■■■□□ 2,55
Igkv6-29A0A0G2JEI6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30,94■■■□□ 2,54
Igkv6-29A0A0G2JEI6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30,93■■■□□ 2,54
Igkv6-29A0A0G2JEI6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30,9■■■□□ 2,54
Igkv6-29A0A0G2JEI6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Igkv6-29A0A0G2JEI6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30,81■■■□□ 2,52
Igkv6-29A0A0G2JEI6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30,79■■■□□ 2,52
Igkv6-29A0A0G2JEI6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30,79■■■□□ 2,52
Igkv6-29A0A0G2JEI6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30,75■■■□□ 2,51
Igkv6-29A0A0G2JEI6 Gm25238-201ENSMUST00000174914 89 ntBASIC30,67■■■□□ 2,5
Igkv6-29A0A0G2JEI6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30,65■■■□□ 2,5
Igkv6-29A0A0G2JEI6 Psd-208ENSMUST00000224556 2034 ntBASIC30,6■■■□□ 2,49
Igkv6-29A0A0G2JEI6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30,51■■■□□ 2,47
Igkv6-29A0A0G2JEI6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Igkv6-29A0A0G2JEI6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30,22■■■□□ 2,43
Igkv6-29A0A0G2JEI6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30,12■■■□□ 2,41
Igkv6-29A0A0G2JEI6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30,01■■■□□ 2,39
Igkv6-29A0A0G2JEI6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29,94■■■□□ 2,38
Igkv6-29A0A0G2JEI6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,89■■■□□ 2,38
Igkv6-29A0A0G2JEI6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29,88■■■□□ 2,37
Igkv6-29A0A0G2JEI6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29,82■■■□□ 2,36
Igkv6-29A0A0G2JEI6 Gm27325-201ENSMUST00000175467 74 ntBASIC29,81■■■□□ 2,36
Igkv6-29A0A0G2JEI6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29,78■■■□□ 2,36
Igkv6-29A0A0G2JEI6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,77■■■□□ 2,36
Igkv6-29A0A0G2JEI6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29,74■■■□□ 2,35
Igkv6-29A0A0G2JEI6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29,72■■■□□ 2,35
Igkv6-29A0A0G2JEI6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29,69■■■□□ 2,34
Igkv6-29A0A0G2JEI6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29,57■■■□□ 2,32
Igkv6-29A0A0G2JEI6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29,46■■■□□ 2,31
Igkv6-29A0A0G2JEI6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29,43■■■□□ 2,3
Igkv6-29A0A0G2JEI6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29,39■■■□□ 2,3
Igkv6-29A0A0G2JEI6 Gm25262-201ENSMUST00000174934 133 ntBASIC29,36■■■□□ 2,29
Igkv6-29A0A0G2JEI6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29,35■■■□□ 2,29
Igkv6-29A0A0G2JEI6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Igkv6-29A0A0G2JEI6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29,27■■■□□ 2,28
Igkv6-29A0A0G2JEI6 Rab21-202ENSMUST00000218831 843 ntBASIC29,25■■■□□ 2,27
Igkv6-29A0A0G2JEI6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29,24■■■□□ 2,27
Igkv6-29A0A0G2JEI6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29,15■■■□□ 2,26
Igkv6-29A0A0G2JEI6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29,11■■■□□ 2,25
Igkv6-29A0A0G2JEI6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29,11■■■□□ 2,25
Igkv6-29A0A0G2JEI6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29,09■■■□□ 2,25
Igkv6-29A0A0G2JEI6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28,98■■■□□ 2,23
Igkv6-29A0A0G2JEI6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,97■■■□□ 2,23
Igkv6-29A0A0G2JEI6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28,94■■■□□ 2,22
Igkv6-29A0A0G2JEI6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28,94■■■□□ 2,22
Igkv6-29A0A0G2JEI6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
Igkv6-29A0A0G2JEI6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28,93■■■□□ 2,22
Igkv6-29A0A0G2JEI6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28,91■■■□□ 2,22
Igkv6-29A0A0G2JEI6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28,9■■■□□ 2,22
Igkv6-29A0A0G2JEI6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28,88■■■□□ 2,21
Igkv6-29A0A0G2JEI6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28,87■■■□□ 2,21
Igkv6-29A0A0G2JEI6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28,85■■■□□ 2,21
Igkv6-29A0A0G2JEI6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28,83■■■□□ 2,21
Igkv6-29A0A0G2JEI6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28,82■■■□□ 2,2
Igkv6-29A0A0G2JEI6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28,79■■■□□ 2,2
Igkv6-29A0A0G2JEI6 Gm10524-201ENSMUST00000181931 1893 ntBASIC28,77■■■□□ 2,2
Igkv6-29A0A0G2JEI6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28,75■■■□□ 2,19
Igkv6-29A0A0G2JEI6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28,75■■■□□ 2,19
Igkv6-29A0A0G2JEI6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28,74■■■□□ 2,19
Igkv6-29A0A0G2JEI6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28,73■■■□□ 2,19
Igkv6-29A0A0G2JEI6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Igkv6-29A0A0G2JEI6 Gm26115-201ENSMUST00000175605 87 ntBASIC28,62■■■□□ 2,17
Igkv6-29A0A0G2JEI6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Igkv6-29A0A0G2JEI6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,59■■■□□ 2,17
Igkv6-29A0A0G2JEI6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28,59■■■□□ 2,17
Igkv6-29A0A0G2JEI6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28,56■■■□□ 2,16
Igkv6-29A0A0G2JEI6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28,53■■■□□ 2,16
Igkv6-29A0A0G2JEI6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28,51■■■□□ 2,15
Igkv6-29A0A0G2JEI6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28,5■■■□□ 2,15
Igkv6-29A0A0G2JEI6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28,49■■■□□ 2,15
Igkv6-29A0A0G2JEI6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28,48■■■□□ 2,15
Igkv6-29A0A0G2JEI6 Gm42596-201ENSMUST00000196305 1958 ntBASIC28,48■■■□□ 2,15
Igkv6-29A0A0G2JEI6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28,46■■■□□ 2,15
Igkv6-29A0A0G2JEI6 Gm8109-201ENSMUST00000194076 746 ntBASIC28,45■■■□□ 2,14
Igkv6-29A0A0G2JEI6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Igkv6-29A0A0G2JEI6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28,37■■■□□ 2,13
Igkv6-29A0A0G2JEI6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28,34■■■□□ 2,13
Retrieved 100 of 76,532 protein–RNA pairs in 20,6 ms