Protein–RNA interactions for Protein: A0A0G2JEI6

Igkv6-29, Immunoglobulin kappa chain variable 6-29 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-29A0A0G2JEI6 Gm25239-201ENSMUST00000174915 86 ntBASIC38.85■■■■□ 3.81
Igkv6-29A0A0G2JEI6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
Igkv6-29A0A0G2JEI6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Igkv6-29A0A0G2JEI6 Gm15042-201ENSMUST00000120212 883 ntBASIC33.98■■■■□ 3.03
Igkv6-29A0A0G2JEI6 Gm24109-201ENSMUST00000175489 103 ntBASIC33.68■■■□□ 2.98
Igkv6-29A0A0G2JEI6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Igkv6-29A0A0G2JEI6 Gm15045-201ENSMUST00000117359 883 ntBASIC33.25■■■□□ 2.91
Igkv6-29A0A0G2JEI6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Igkv6-29A0A0G2JEI6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
Igkv6-29A0A0G2JEI6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Igkv6-29A0A0G2JEI6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Igkv6-29A0A0G2JEI6 Gm23366-201ENSMUST00000175022 89 ntBASIC32.46■■■□□ 2.79
Igkv6-29A0A0G2JEI6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Igkv6-29A0A0G2JEI6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
Igkv6-29A0A0G2JEI6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Igkv6-29A0A0G2JEI6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Igkv6-29A0A0G2JEI6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.41■■■□□ 2.62
Igkv6-29A0A0G2JEI6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
Igkv6-29A0A0G2JEI6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Igkv6-29A0A0G2JEI6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.35■■■□□ 2.61
Igkv6-29A0A0G2JEI6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Igkv6-29A0A0G2JEI6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.15■■■□□ 2.58
Igkv6-29A0A0G2JEI6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.01■■■□□ 2.55
Igkv6-29A0A0G2JEI6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Igkv6-29A0A0G2JEI6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Igkv6-29A0A0G2JEI6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Igkv6-29A0A0G2JEI6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
Igkv6-29A0A0G2JEI6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Igkv6-29A0A0G2JEI6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.81■■■□□ 2.52
Igkv6-29A0A0G2JEI6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Igkv6-29A0A0G2JEI6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Igkv6-29A0A0G2JEI6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Igkv6-29A0A0G2JEI6 Gm25238-201ENSMUST00000174914 89 ntBASIC30.67■■■□□ 2.5
Igkv6-29A0A0G2JEI6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.65■■■□□ 2.5
Igkv6-29A0A0G2JEI6 Psd-208ENSMUST00000224556 2034 ntBASIC30.6■■■□□ 2.49
Igkv6-29A0A0G2JEI6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Igkv6-29A0A0G2JEI6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Igkv6-29A0A0G2JEI6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.22■■■□□ 2.43
Igkv6-29A0A0G2JEI6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
Igkv6-29A0A0G2JEI6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Igkv6-29A0A0G2JEI6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.94■■■□□ 2.38
Igkv6-29A0A0G2JEI6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Igkv6-29A0A0G2JEI6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Igkv6-29A0A0G2JEI6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Igkv6-29A0A0G2JEI6 Gm27325-201ENSMUST00000175467 74 ntBASIC29.81■■■□□ 2.36
Igkv6-29A0A0G2JEI6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.78■■■□□ 2.36
Igkv6-29A0A0G2JEI6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Igkv6-29A0A0G2JEI6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Igkv6-29A0A0G2JEI6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
Igkv6-29A0A0G2JEI6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.69■■■□□ 2.34
Igkv6-29A0A0G2JEI6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.57■■■□□ 2.32
Igkv6-29A0A0G2JEI6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Igkv6-29A0A0G2JEI6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Igkv6-29A0A0G2JEI6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.39■■■□□ 2.3
Igkv6-29A0A0G2JEI6 Gm25262-201ENSMUST00000174934 133 ntBASIC29.36■■■□□ 2.29
Igkv6-29A0A0G2JEI6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.35■■■□□ 2.29
Igkv6-29A0A0G2JEI6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Igkv6-29A0A0G2JEI6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Igkv6-29A0A0G2JEI6 Rab21-202ENSMUST00000218831 843 ntBASIC29.25■■■□□ 2.27
Igkv6-29A0A0G2JEI6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Igkv6-29A0A0G2JEI6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.15■■■□□ 2.26
Igkv6-29A0A0G2JEI6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.11■■■□□ 2.25
Igkv6-29A0A0G2JEI6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Igkv6-29A0A0G2JEI6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Igkv6-29A0A0G2JEI6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Igkv6-29A0A0G2JEI6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Igkv6-29A0A0G2JEI6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.94■■■□□ 2.22
Igkv6-29A0A0G2JEI6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.94■■■□□ 2.22
Igkv6-29A0A0G2JEI6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Igkv6-29A0A0G2JEI6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Igkv6-29A0A0G2JEI6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Igkv6-29A0A0G2JEI6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
Igkv6-29A0A0G2JEI6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Igkv6-29A0A0G2JEI6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Igkv6-29A0A0G2JEI6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Igkv6-29A0A0G2JEI6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.83■■■□□ 2.21
Igkv6-29A0A0G2JEI6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Igkv6-29A0A0G2JEI6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
Igkv6-29A0A0G2JEI6 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.77■■■□□ 2.2
Igkv6-29A0A0G2JEI6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.75■■■□□ 2.19
Igkv6-29A0A0G2JEI6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Igkv6-29A0A0G2JEI6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Igkv6-29A0A0G2JEI6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Igkv6-29A0A0G2JEI6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Igkv6-29A0A0G2JEI6 Gm26115-201ENSMUST00000175605 87 ntBASIC28.62■■■□□ 2.17
Igkv6-29A0A0G2JEI6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Igkv6-29A0A0G2JEI6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Igkv6-29A0A0G2JEI6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.59■■■□□ 2.17
Igkv6-29A0A0G2JEI6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Igkv6-29A0A0G2JEI6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Igkv6-29A0A0G2JEI6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Igkv6-29A0A0G2JEI6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.5■■■□□ 2.15
Igkv6-29A0A0G2JEI6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Igkv6-29A0A0G2JEI6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.48■■■□□ 2.15
Igkv6-29A0A0G2JEI6 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.48■■■□□ 2.15
Igkv6-29A0A0G2JEI6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Igkv6-29A0A0G2JEI6 Gm8109-201ENSMUST00000194076 746 ntBASIC28.45■■■□□ 2.14
Igkv6-29A0A0G2JEI6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Igkv6-29A0A0G2JEI6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.37■■■□□ 2.13
Igkv6-29A0A0G2JEI6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms