Protein–RNA interactions for Protein: Q8R2I3

Defb35, Beta-defensin 35, mousemouse

Predictions only

Length 63 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb35Q8R2I3 Gm25239-201ENSMUST00000174915 86 ntBASIC36.12■■■■□ 3.37
Defb35Q8R2I3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
Defb35Q8R2I3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Defb35Q8R2I3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Defb35Q8R2I3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Defb35Q8R2I3 Gm15042-201ENSMUST00000120212 883 ntBASIC31.84■■■□□ 2.69
Defb35Q8R2I3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
Defb35Q8R2I3 Gm15045-201ENSMUST00000117359 883 ntBASIC31.23■■■□□ 2.59
Defb35Q8R2I3 Gm24109-201ENSMUST00000175489 103 ntBASIC31.19■■■□□ 2.58
Defb35Q8R2I3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Defb35Q8R2I3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Defb35Q8R2I3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
Defb35Q8R2I3 Psd-208ENSMUST00000224556 2034 ntBASIC30.4■■■□□ 2.46
Defb35Q8R2I3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.24■■■□□ 2.43
Defb35Q8R2I3 Gm23366-201ENSMUST00000175022 89 ntBASIC30.15■■■□□ 2.42
Defb35Q8R2I3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Defb35Q8R2I3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Defb35Q8R2I3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Defb35Q8R2I3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Defb35Q8R2I3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Defb35Q8R2I3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Defb35Q8R2I3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Defb35Q8R2I3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Defb35Q8R2I3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
Defb35Q8R2I3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Defb35Q8R2I3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.48■■■□□ 2.31
Defb35Q8R2I3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Defb35Q8R2I3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Defb35Q8R2I3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Defb35Q8R2I3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Defb35Q8R2I3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.25■■■□□ 2.27
Defb35Q8R2I3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Defb35Q8R2I3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.06■■■□□ 2.24
Defb35Q8R2I3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Defb35Q8R2I3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.87■■■□□ 2.21
Defb35Q8R2I3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Defb35Q8R2I3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Defb35Q8R2I3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Defb35Q8R2I3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Defb35Q8R2I3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Defb35Q8R2I3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.55■■■□□ 2.16
Defb35Q8R2I3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Defb35Q8R2I3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Defb35Q8R2I3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.49■■■□□ 2.15
Defb35Q8R2I3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Defb35Q8R2I3 Gm25238-201ENSMUST00000174914 89 ntBASIC28.44■■■□□ 2.14
Defb35Q8R2I3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Defb35Q8R2I3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.36■■■□□ 2.13
Defb35Q8R2I3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.28■■■□□ 2.12
Defb35Q8R2I3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Defb35Q8R2I3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Defb35Q8R2I3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Defb35Q8R2I3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Defb35Q8R2I3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Defb35Q8R2I3 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.05■■■□□ 2.08
Defb35Q8R2I3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Defb35Q8R2I3 Gm27325-201ENSMUST00000175467 74 ntBASIC27.98■■■□□ 2.07
Defb35Q8R2I3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Defb35Q8R2I3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Defb35Q8R2I3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.9■■■□□ 2.06
Defb35Q8R2I3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Defb35Q8R2I3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
Defb35Q8R2I3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Defb35Q8R2I3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.8■■■□□ 2.04
Defb35Q8R2I3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.77■■■□□ 2.04
Defb35Q8R2I3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Defb35Q8R2I3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Defb35Q8R2I3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Defb35Q8R2I3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Defb35Q8R2I3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.63■■■□□ 2.01
Defb35Q8R2I3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
Defb35Q8R2I3 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.59■■■□□ 2.01
Defb35Q8R2I3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Defb35Q8R2I3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Defb35Q8R2I3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.54■■■□□ 2
Defb35Q8R2I3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.53■■■□□ 2
Defb35Q8R2I3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Defb35Q8R2I3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.51■■□□□ 1.99
Defb35Q8R2I3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Defb35Q8R2I3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
Defb35Q8R2I3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Defb35Q8R2I3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.31■■□□□ 1.96
Defb35Q8R2I3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Defb35Q8R2I3 Rab21-202ENSMUST00000218831 843 ntBASIC27.23■■□□□ 1.95
Defb35Q8R2I3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Defb35Q8R2I3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Defb35Q8R2I3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.13■■□□□ 1.93
Defb35Q8R2I3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.1■■□□□ 1.93
Defb35Q8R2I3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Defb35Q8R2I3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Defb35Q8R2I3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Defb35Q8R2I3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Defb35Q8R2I3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.01■■□□□ 1.91
Defb35Q8R2I3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Defb35Q8R2I3 Gm25262-201ENSMUST00000174934 133 ntBASIC27■■□□□ 1.91
Defb35Q8R2I3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Defb35Q8R2I3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Defb35Q8R2I3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.96■■□□□ 1.91
Defb35Q8R2I3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Defb35Q8R2I3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms