Protein–RNA interactions for Protein: Q8R2I3

Defb35, Beta-defensin 35, mousemouse

Predictions only

Length 63 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb35Q8R2I3 Gm25239-201ENSMUST00000174915 86 ntBASIC36,12■■■■□ 3,37
Defb35Q8R2I3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33,26■■■□□ 2,91
Defb35Q8R2I3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32,83■■■□□ 2,85
Defb35Q8R2I3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32,78■■■□□ 2,84
Defb35Q8R2I3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32,01■■■□□ 2,71
Defb35Q8R2I3 Gm15042-201ENSMUST00000120212 883 ntBASIC31,84■■■□□ 2,69
Defb35Q8R2I3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,69■■■□□ 2,66
Defb35Q8R2I3 Gm15045-201ENSMUST00000117359 883 ntBASIC31,23■■■□□ 2,59
Defb35Q8R2I3 Gm24109-201ENSMUST00000175489 103 ntBASIC31,19■■■□□ 2,58
Defb35Q8R2I3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Defb35Q8R2I3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30,69■■■□□ 2,5
Defb35Q8R2I3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30,45■■■□□ 2,47
Defb35Q8R2I3 Psd-208ENSMUST00000224556 2034 ntBASIC30,4■■■□□ 2,46
Defb35Q8R2I3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30,24■■■□□ 2,43
Defb35Q8R2I3 Gm23366-201ENSMUST00000175022 89 ntBASIC30,15■■■□□ 2,42
Defb35Q8R2I3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30,08■■■□□ 2,41
Defb35Q8R2I3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30,05■■■□□ 2,4
Defb35Q8R2I3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30,01■■■□□ 2,39
Defb35Q8R2I3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,97■■■□□ 2,39
Defb35Q8R2I3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29,84■■■□□ 2,37
Defb35Q8R2I3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29,8■■■□□ 2,36
Defb35Q8R2I3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29,72■■■□□ 2,35
Defb35Q8R2I3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29,69■■■□□ 2,34
Defb35Q8R2I3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29,62■■■□□ 2,33
Defb35Q8R2I3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29,54■■■□□ 2,32
Defb35Q8R2I3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29,48■■■□□ 2,31
Defb35Q8R2I3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29,45■■■□□ 2,31
Defb35Q8R2I3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Defb35Q8R2I3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,32■■■□□ 2,28
Defb35Q8R2I3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29,32■■■□□ 2,28
Defb35Q8R2I3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29,25■■■□□ 2,27
Defb35Q8R2I3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29,19■■■□□ 2,26
Defb35Q8R2I3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29,06■■■□□ 2,24
Defb35Q8R2I3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,99■■■□□ 2,23
Defb35Q8R2I3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28,87■■■□□ 2,21
Defb35Q8R2I3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28,81■■■□□ 2,2
Defb35Q8R2I3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,68■■■□□ 2,18
Defb35Q8R2I3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Defb35Q8R2I3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28,66■■■□□ 2,18
Defb35Q8R2I3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28,63■■■□□ 2,17
Defb35Q8R2I3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28,55■■■□□ 2,16
Defb35Q8R2I3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28,53■■■□□ 2,16
Defb35Q8R2I3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28,53■■■□□ 2,16
Defb35Q8R2I3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28,49■■■□□ 2,15
Defb35Q8R2I3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Defb35Q8R2I3 Gm25238-201ENSMUST00000174914 89 ntBASIC28,44■■■□□ 2,14
Defb35Q8R2I3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28,38■■■□□ 2,13
Defb35Q8R2I3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28,36■■■□□ 2,13
Defb35Q8R2I3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28,28■■■□□ 2,12
Defb35Q8R2I3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,23■■■□□ 2,11
Defb35Q8R2I3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28,23■■■□□ 2,11
Defb35Q8R2I3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28,19■■■□□ 2,1
Defb35Q8R2I3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28,13■■■□□ 2,09
Defb35Q8R2I3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28,08■■■□□ 2,09
Defb35Q8R2I3 Gm10524-201ENSMUST00000181931 1893 ntBASIC28,05■■■□□ 2,08
Defb35Q8R2I3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27,99■■■□□ 2,07
Defb35Q8R2I3 Gm27325-201ENSMUST00000175467 74 ntBASIC27,98■■■□□ 2,07
Defb35Q8R2I3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27,91■■■□□ 2,06
Defb35Q8R2I3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27,91■■■□□ 2,06
Defb35Q8R2I3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27,9■■■□□ 2,06
Defb35Q8R2I3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27,84■■■□□ 2,05
Defb35Q8R2I3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27,81■■■□□ 2,04
Defb35Q8R2I3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27,8■■■□□ 2,04
Defb35Q8R2I3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27,8■■■□□ 2,04
Defb35Q8R2I3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27,77■■■□□ 2,04
Defb35Q8R2I3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27,75■■■□□ 2,03
Defb35Q8R2I3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27,67■■■□□ 2,02
Defb35Q8R2I3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27,63■■■□□ 2,01
Defb35Q8R2I3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27,63■■■□□ 2,01
Defb35Q8R2I3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27,63■■■□□ 2,01
Defb35Q8R2I3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27,61■■■□□ 2,01
Defb35Q8R2I3 Gm42596-201ENSMUST00000196305 1958 ntBASIC27,59■■■□□ 2,01
Defb35Q8R2I3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27,57■■■□□ 2
Defb35Q8R2I3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27,56■■■□□ 2
Defb35Q8R2I3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27,54■■■□□ 2
Defb35Q8R2I3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27,53■■■□□ 2
Defb35Q8R2I3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27,52■■■□□ 2
Defb35Q8R2I3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27,51■■□□□ 1,99
Defb35Q8R2I3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27,46■■□□□ 1,99
Defb35Q8R2I3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27,33■■□□□ 1,97
Defb35Q8R2I3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27,32■■□□□ 1,96
Defb35Q8R2I3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27,31■■□□□ 1,96
Defb35Q8R2I3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27,29■■□□□ 1,96
Defb35Q8R2I3 Rab21-202ENSMUST00000218831 843 ntBASIC27,23■■□□□ 1,95
Defb35Q8R2I3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27,22■■□□□ 1,95
Defb35Q8R2I3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27,17■■□□□ 1,94
Defb35Q8R2I3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27,13■■□□□ 1,93
Defb35Q8R2I3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27,1■■□□□ 1,93
Defb35Q8R2I3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27,06■■□□□ 1,92
Defb35Q8R2I3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27,05■■□□□ 1,92
Defb35Q8R2I3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27,03■■□□□ 1,92
Defb35Q8R2I3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27,02■■□□□ 1,92
Defb35Q8R2I3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27,01■■□□□ 1,91
Defb35Q8R2I3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27,01■■□□□ 1,91
Defb35Q8R2I3 Gm25262-201ENSMUST00000174934 133 ntBASIC27■■□□□ 1,91
Defb35Q8R2I3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26,99■■□□□ 1,91
Defb35Q8R2I3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26,97■■□□□ 1,91
Defb35Q8R2I3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26,96■■□□□ 1,91
Defb35Q8R2I3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26,96■■□□□ 1,91
Defb35Q8R2I3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26,96■■□□□ 1,91
Retrieved 100 of 76,532 protein–RNA pairs in 10,8 ms