RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Pilrb2Q2YFS1 225 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 OstcQ78XF5 149 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 GaptQ8CB93 157 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Tbx19Q99ME7 446 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Fxyd1Q9Z239 92 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Defa34D3Z0J0 93 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 P01723 117 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Srp14P16254 110 aaKnown RBP8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 P18526 117 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Defa6P50704 93 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Znf260Q62513 407 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Msrb2Q78J03 175 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr1333Q7TQV7 317 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm9945Q8BNZ3 91 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 EppinQ9DA01 134 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Zdhhc16Q9ESG8 361 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm3045A0A1D5RMA1 209 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 TbpP29037 316 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gfra1P97785 468 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Siah2Q06986 325 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 ElaneQ3UP87 265 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Mex3bQ69Z36 601 aaKnown RBP8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Prrg4Q8BGN6 226 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Rnf115Q9D0C1 305 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gpr132Q9Z282 382 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Foxf2O54743 446 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 LtaP09225 202 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Mc5rP41149 325 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 NotoQ5TIS6 240 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Vsig8Q6P3A4 417 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr1258Q8VGN6 311 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 ChtopQ9CY57 249 aaKnown RBP8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Pi4kaE9Q3L2 2105 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Trav7-4A0A075B6C1 113 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Nkx2-8O70584 235 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Iglc2P01844 104 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Trav7d-4Q5R1H9 113 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr823Q7TRH2 315 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr824Q8VFU4 315 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Higd1bQ99JY6 98 aa8.56□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Defa30E9QPZ2 93 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Tmem97Q8VD00 176 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr491Q8VG06 310 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Fam213bQ9DB60 201 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm5157A0A087WRH8 301 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm27021M0QWE2 156 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Dlx6P70397 175 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Rasl11aQ6IMB1 242 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Elovl5Q8BHI7 299 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm10118Q8C8J5 116 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Mob3bQ8VE04 216 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Rnf126Q91YL2 313 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Tmem189Q99LQ7 271 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Rnf125Q9D9R0 233 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Foxj2Q9ES18 565 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Cd5lQ9QWK4 352 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm45623A0A1B0GSF6 103 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Amn1B8JKV0 258 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Defa-rs1P17533 116 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gng4P50153 75 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Hs3st6Q5GFD5 342 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Tm2d3Q8BJ83 261 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Prss41Q920S2 322 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Cacna1eQ61290 2272 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr1331K7N684 317 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 BC049762Q8C601 163 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm4894Q8CA09 118 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Fmc1Q9CR13 113 aa8.55□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Tnfsf11O35235 316 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Efnb3O35393 340 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 PspnO70300 156 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Acrv1P50289 261 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Slc17a9Q8VCL5 447 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Tspo2Q9CRZ8 162 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 MylkQ6PDN3 1941 aaKnown RBP8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Ighv1-15A0A0A6YXA5 117 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm45871A0A1B0GRI9 540 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 1700084M14RikB1AT01 78 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Cited1P97769 203 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Defb33Q30KN3 62 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr399Q7TRX3 311 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Srrm4Q8BKA3 608 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Znf22Q9ERU3 237 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Arpc1aQ9R0Q6 370 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Col4a6B1AVK5 1691 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm8251F6VUT6 1994 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Trbv19A0A0B4J1H4 117 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Ighv9-1A0A0B4J1P3 117 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm21616B6ZB74 166 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Psmg4P0C7N9 123 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr1382Q7TQT3 311 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Cabin1G3X8Q1 2187 aaKnown RBP8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Phf3B2RQG2 2025 aaKnown RBP8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Tmem139E9PX92 214 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Scgb1b19F6WYW0 93 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Nat8f4G5E8L3 226 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Trdv2-2Q5R1A4 116 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Bud31Q6PGH1 103 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 OpalinQ7M750 143 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Znf146Q8BQN6 292 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms