RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	CBP3	P21560	335 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	RPC53	P25441	422 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	PRR1	P28708	518 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	KIP1	P28742	1111 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	MMS4	P38257	691 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	SIP3	P38717	1229 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	MNN1	P39106	762 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	TAF1	P46677	1066 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	FYV8	P46949	817 aa	Known RBP	4.64	□□□□□ -1.67
SPN1	YPR133C	POL31	P46957	487 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	CCM1	P48237	864 aa	Predicted RBP	4.64	□□□□□ -1.67
SPN1	YPR133C	YGR153W	P48238	217 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	ORC5	P50874	479 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	PSP1	P50896	841 aa	Known RBP	4.64	□□□□□ -1.67
SPN1	YPR133C	YKE2	P52553	114 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	GYL1	Q04322	720 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	SHS1	Q07657	551 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	CTF3	Q12748	733 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	YGR161W-C	Q3E744	92 aa		4.64	□□□□□ -1.67
SPN1	YPR133C	CSF1	Q12150	2958 aa		4.63	□□□□□ -1.67
SPN1	YPR133C	TRM2	P33753	639 aa		4.63	□□□□□ -1.67
SPN1	YPR133C	SIF2	P38262	535 aa		4.63	□□□□□ -1.67
SPN1	YPR133C	RGD1	P38339	666 aa		4.63	□□□□□ -1.67
SPN1	YPR133C	QNS1	P38795	714 aa	Known RBP	4.63	□□□□□ -1.67
SPN1	YPR133C	YPT35	P38815	214 aa	Known RBP	4.63	□□□□□ -1.67
SPN1	YPR133C	SHE10	P53075	577 aa		4.63	□□□□□ -1.67
SPN1	YPR133C	CBK1	P53894	756 aa		4.63	□□□□□ -1.67
SPN1	YPR133C	ARP5	P53946	755 aa		4.63	□□□□□ -1.67
SPN1	YPR133C	VTC3	Q02725	835 aa		4.63	□□□□□ -1.67
SPN1	YPR133C	SNU56	Q03782	492 aa	Known RBP	4.63	□□□□□ -1.67
SPN1	YPR133C	EAF1	Q06337	982 aa		4.63	□□□□□ -1.67
SPN1	YPR133C	HDA2	Q06629	674 aa		4.63	□□□□□ -1.67
SPN1	YPR133C	TRE1	Q08919	783 aa		4.63	□□□□□ -1.67
SPN1	YPR133C	TIP41	Q12199	356 aa		4.63	□□□□□ -1.67
SPN1	YPR133C	TUF1	P02992	437 aa	Known RBP	4.62	□□□□□ -1.67
SPN1	YPR133C	YEL076C-A	P0CX16	216 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	YLR464W	P0CX17	216 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	FRS2	P15625	503 aa	Known RBP	4.62	□□□□□ -1.67
SPN1	YPR133C	VPS3	P23643	1011 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SPN1	YPR133C	GPI10	P30777	616 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	YSC83	P32792	385 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	SLA2	P33338	968 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	MNN4	P36044	1178 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	YEL076C	P39971	216 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	NUP82	P40368	713 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	CHS6	P40955	746 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	KRI1	P42846	591 aa	Known RBP	4.62	□□□□□ -1.67
SPN1	YPR133C	IES1	P43579	692 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	VTC2	P43585	828 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SPN1	YPR133C	ENT3	P47160	408 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	UTP8	P53276	713 aa	Known RBP	4.62	□□□□□ -1.67
SPN1	YPR133C	SDA1	P53313	767 aa	Known RBP	4.62	□□□□□ -1.67
SPN1	YPR133C	IMP4	P53941	290 aa	Known RBP	4.62	□□□□□ -1.67
SPN1	YPR133C	SIW14	P53965	281 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	HER2	Q03557	464 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	UTP14	Q04500	899 aa	Known RBP	4.62	□□□□□ -1.67
SPN1	YPR133C	YLR407W	Q06070	228 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	MRL1	Q06815	381 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	YPQ1	Q12010	308 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	HRT3	Q12347	344 aa		4.62	□□□□□ -1.67
SPN1	YPR133C	TPK1	P06244	397 aa		4.61	□□□□□ -1.67
SPN1	YPR133C	MTF1	P14908	341 aa	Known RBP	4.61	□□□□□ -1.67
SPN1	YPR133C	PFK1	P16861	987 aa	Known RBP	4.61	□□□□□ -1.67
SPN1	YPR133C	PPH22	P23595	377 aa		4.61	□□□□□ -1.67
SPN1	YPR133C	RAD16	P31244	790 aa		4.61	□□□□□ -1.67
SPN1	YPR133C	SEA4	P38164	1038 aa		4.61	□□□□□ -1.67
SPN1	YPR133C	YHR054C	P38780	354 aa		4.61	□□□□□ -1.67
SPN1	YPR133C	PEX7	P39108	375 aa		4.61	□□□□□ -1.67
SPN1	YPR133C	BTT1	P40314	149 aa	Predicted RBP	4.61	□□□□□ -1.67
SPN1	YPR133C	VPS25	P47142	202 aa		4.61	□□□□□ -1.67
SPN1	YPR133C	GNP1	P48813	663 aa		4.61	□□□□□ -1.67
SPN1	YPR133C	ASN1	P49089	572 aa	Known RBP	4.61	□□□□□ -1.67
SPN1	YPR133C	ADY4	Q05955	493 aa		4.61	□□□□□ -1.67
SPN1	YPR133C	CDD1	Q06549	142 aa		4.61	□□□□□ -1.67
SPN1	YPR133C	BSP1	Q06604	576 aa		4.61	□□□□□ -1.67
SPN1	YPR133C	GET3	Q12154	354 aa	Known RBP	4.61	□□□□□ -1.67
SPN1	YPR133C	GCR1	P07261	785 aa		4.6	□□□□□ -1.67
SPN1	YPR133C	ALG1	P16661	449 aa		4.6	□□□□□ -1.67
SPN1	YPR133C	PRO1	P32264	428 aa		4.6	□□□□□ -1.67
SPN1	YPR133C	YKR051W	P36142	418 aa		4.6	□□□□□ -1.67
SPN1	YPR133C	YHL012W	P38709	493 aa		4.6	□□□□□ -1.67
SPN1	YPR133C	PCF11	P39081	626 aa	Predicted RBP	4.6	□□□□□ -1.67
SPN1	YPR133C	GIP4	P39732	760 aa		4.6	□□□□□ -1.67
SPN1	YPR133C	DOT6	P40059	670 aa	Known RBP	4.6	□□□□□ -1.67
SPN1	YPR133C	RMD8	P43620	662 aa		4.6	□□□□□ -1.67
SPN1	YPR133C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
SPN1	YPR133C	NMA2	P53204	395 aa		4.6	□□□□□ -1.67
SPN1	YPR133C	HXT15	P54854	567 aa		4.6	□□□□□ -1.67
SPN1	YPR133C	NAN1	Q02931	896 aa	Known RBP	4.6	□□□□□ -1.67
SPN1	YPR133C	SSY1	Q03770	852 aa		4.6	□□□□□ -1.67
SPN1	YPR133C	TIF35	Q04067	274 aa	Known RBP	4.6	□□□□□ -1.67
SPN1	YPR133C	FLC1	Q08967	793 aa		4.6	□□□□□ -1.67
SPN1	YPR133C	PTC5	Q12511	572 aa		4.6	□□□□□ -1.67
SPN1	YPR133C	ASP3-2	P0CX77	362 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	ASP3-3	P0CX78	362 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	ASP3-4	P0CX79	362 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	ASP3-1	P0CZ17	362 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	CDC34	P14682	295 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms