RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeastyeast

Gene YDC1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDC1YPL087W IME1P21190 360 aa5.65□□□□□ -1.5
YDC1YPL087W CTP1P38152 299 aa5.65□□□□□ -1.5
YDC1YPL087W GPP2P40106 250 aaKnown RBP5.65□□□□□ -1.5
YDC1YPL087W VID28P40547 921 aa5.65□□□□□ -1.5
YDC1YPL087W BUD8P41698 603 aa5.65□□□□□ -1.5
YDC1YPL087W SLD3P53135 668 aa5.65□□□□□ -1.5
YDC1YPL087W YSH1Q06224 779 aaPredicted RBP5.65□□□□□ -1.5
YDC1YPL087W STP4Q07351 490 aa5.65□□□□□ -1.5
YDC1YPL087W MLH3Q12083 715 aa5.65□□□□□ -1.5
YDC1YPL087W MRH1Q12117 320 aaPredicted RBP5.65□□□□□ -1.5
YDC1YPL087W APL3P38065 1025 aa5.64□□□□□ -1.51
YDC1YPL087W NIT2P47016 307 aa5.64□□□□□ -1.51
YDC1YPL087W MPS3P47069 682 aa5.64□□□□□ -1.51
YDC1YPL087W YGR151CP53287 111 aa5.64□□□□□ -1.51
YDC1YPL087W RCR2Q03446 210 aaKnown RBP5.64□□□□□ -1.51
YDC1YPL087W HLR1Q04429 423 aa5.64□□□□□ -1.51
YDC1YPL087W YDL086WQ07505 273 aa5.64□□□□□ -1.51
YDC1YPL087W AIM41Q12032 185 aa5.64□□□□□ -1.51
YDC1YPL087W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
YDC1YPL087W TUF1P02992 437 aaKnown RBP5.63□□□□□ -1.51
YDC1YPL087W KAR1P11927 433 aa5.63□□□□□ -1.51
YDC1YPL087W KCC4P25389 1037 aa5.63□□□□□ -1.51
YDC1YPL087W FUB1P25659 250 aa5.63□□□□□ -1.51
YDC1YPL087W GMH1P36125 273 aa5.63□□□□□ -1.51
YDC1YPL087W FAT1P38225 669 aa5.63□□□□□ -1.51
YDC1YPL087W SRP68P38687 599 aaKnown RBP5.63□□□□□ -1.51
YDC1YPL087W QRI1P43123 477 aaKnown RBP5.63□□□□□ -1.51
YDC1YPL087W RFX1P48743 811 aa5.63□□□□□ -1.51
YDC1YPL087W FDC1Q03034 503 aa5.63□□□□□ -1.51
YDC1YPL087W CEF1Q03654 590 aaPredicted RBP5.63□□□□□ -1.51
YDC1YPL087W BMS1Q08965 1183 aaKnown RBP5.63□□□□□ -1.51
YDC1YPL087W TAF3Q12297 353 aa5.63□□□□□ -1.51
YDC1YPL087W IML1P47170 1584 aa5.63□□□□□ -1.51
YDC1YPL087W TY1B-NL2Q99337 1749 aaKnown RBP5.62□□□□□ -1.51
YDC1YPL087W RPN13O13563 156 aa5.62□□□□□ -1.51
YDC1YPL087W PRE4P30657 266 aa5.62□□□□□ -1.51
YDC1YPL087W MF(ALPHA)2P32435 120 aa5.62□□□□□ -1.51
YDC1YPL087W YHR033WP38690 423 aa5.62□□□□□ -1.51
YDC1YPL087W PEA2P40091 420 aa5.62□□□□□ -1.51
YDC1YPL087W KHA1P40309 873 aa5.62□□□□□ -1.51
YDC1YPL087W HOL1P53389 586 aa5.62□□□□□ -1.51
YDC1YPL087W THI6P41835 540 aa5.61□□□□□ -1.51
YDC1YPL087W NUP188P52593 1655 aaKnown RBP5.6□□□□□ -1.51
YDC1YPL087W MHP1P43638 1398 aa5.6□□□□□ -1.51
YDC1YPL087W CDC26P14724 124 aa5.6□□□□□ -1.51
YDC1YPL087W COX11P19516 300 aaKnown RBP5.6□□□□□ -1.51
YDC1YPL087W YIL166CP40445 542 aa5.6□□□□□ -1.51
YDC1YPL087W PEX14P53112 341 aa5.6□□□□□ -1.51
YDC1YPL087W SQS1P53866 767 aaKnown RBP5.6□□□□□ -1.51
YDC1YPL087W DAK1P54838 584 aaKnown RBP5.6□□□□□ -1.51
YDC1YPL087W RGC1Q06108 1083 aaKnown RBP5.6□□□□□ -1.51
YDC1YPL087W PEX15Q08215 383 aa5.6□□□□□ -1.51
YDC1YPL087W VMR1P38735 1592 aa5.59□□□□□ -1.51
YDC1YPL087W RAV1P47104 1357 aa5.59□□□□□ -1.51
YDC1YPL087W PRM2P40534 656 aa5.59□□□□□ -1.51
YDC1YPL087W VPS73P53142 486 aaKnown RBP5.59□□□□□ -1.51
YDC1YPL087W SPC98P53540 846 aa5.59□□□□□ -1.51
YDC1YPL087W COG6P53959 839 aa5.59□□□□□ -1.51
YDC1YPL087W RTC1Q08281 1341 aa5.58□□□□□ -1.52
YDC1YPL087W DAL3P32459 195 aa5.58□□□□□ -1.52
YDC1YPL087W DHR2P36009 735 aaPredicted RBP5.58□□□□□ -1.52
YDC1YPL087W SET3P36124 751 aa5.58□□□□□ -1.52
YDC1YPL087W TDP1P38319 544 aa5.58□□□□□ -1.52
YDC1YPL087W KSP1P38691 1029 aaKnown RBP5.58□□□□□ -1.52
YDC1YPL087W YEL025CP39991 1188 aa5.58□□□□□ -1.52
YDC1YPL087W FOL1P53848 824 aa5.58□□□□□ -1.52
YDC1YPL087W UFO1Q04511 668 aa5.58□□□□□ -1.52
YDC1YPL087W IZH3Q07959 543 aa5.58□□□□□ -1.52
YDC1YPL087W NGL1Q08213 363 aaKnown RBP5.58□□□□□ -1.52
YDC1YPL087W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
YDC1YPL087W ILV6P25605 309 aaKnown RBP5.57□□□□□ -1.52
YDC1YPL087W TOM20P35180 183 aa5.57□□□□□ -1.52
YDC1YPL087W ESL2P36168 1195 aa5.57□□□□□ -1.52
YDC1YPL087W NOP2P40991 618 aaKnown RBP5.57□□□□□ -1.52
YDC1YPL087W CCT7P42943 550 aaKnown RBP5.57□□□□□ -1.52
YDC1YPL087W ATG36P46983 293 aa5.57□□□□□ -1.52
YDC1YPL087W YJR120WP47157 116 aa5.57□□□□□ -1.52
YDC1YPL087W DIP5P53388 608 aa5.57□□□□□ -1.52
YDC1YPL087W APM1Q00776 475 aaPredicted RBP5.57□□□□□ -1.52
YDC1YPL087W NGL2Q03264 515 aaKnown RBP5.57□□□□□ -1.52
YDC1YPL087W RKI1Q12189 258 aa5.57□□□□□ -1.52
YDC1YPL087W VPS5Q92331 675 aa5.57□□□□□ -1.52
YDC1YPL087W TY3B-IQ7LHG5 1498 aaKnown RBP5.57□□□□□ -1.52
YDC1YPL087W SPO11P23179 398 aa5.56□□□□□ -1.52
YDC1YPL087W HXT4P32467 576 aa5.56□□□□□ -1.52
YDC1YPL087W MSS1P32559 526 aaPredicted RBP5.56□□□□□ -1.52
YDC1YPL087W FTR1P40088 404 aa5.56□□□□□ -1.52
YDC1YPL087W PHM6Q05637 104 aa5.56□□□□□ -1.52
YDC1YPL087W YCG1Q06680 1035 aa5.56□□□□□ -1.52
YDC1YPL087W SEC12P11655 471 aa5.55□□□□□ -1.52
YDC1YPL087W HMG2P12684 1045 aa5.55□□□□□ -1.52
YDC1YPL087W HEM12P32347 362 aaPredicted RBP5.55□□□□□ -1.52
YDC1YPL087W SER1P33330 395 aaKnown RBP5.55□□□□□ -1.52
YDC1YPL087W PPE1P38796 400 aa5.55□□□□□ -1.52
YDC1YPL087W YHR097CP38809 366 aaKnown RBP5.55□□□□□ -1.52
YDC1YPL087W CRG1P38892 291 aaRIP-Chip data5.55□□□□□ -1.52not detected
YDC1YPL087W SSP120P39931 234 aaKnown RBP5.55□□□□□ -1.52
YDC1YPL087W TMN3P40071 706 aa5.55□□□□□ -1.52
YDC1YPL087W NMA2P53204 395 aa5.55□□□□□ -1.52
YDC1YPL087W PEF1P53238 335 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms