RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W PLC1P32383 869 aa8.83□□□□□ -1
AMF1YOR378W YBR225WP38321 900 aa8.83□□□□□ -1
AMF1YOR378W RIM4P38741 713 aa8.83□□□□□ -1
AMF1YOR378W RFX1P48743 811 aa8.83□□□□□ -1
AMF1YOR378W YNL034WP53963 612 aa8.83□□□□□ -1
AMF1YOR378W YNL018CP53976 612 aa8.83□□□□□ -1
AMF1YOR378W GCN5Q03330 439 aa8.83□□□□□ -1
AMF1YOR378W YML002WP0CF17 737 aa8.82□□□□□ -1
AMF1YOR378W PDE1P22434 369 aa8.82□□□□□ -1
AMF1YOR378W YIH1P25637 258 aa8.82□□□□□ -1
AMF1YOR378W DAL1P32375 460 aa8.82□□□□□ -1
AMF1YOR378W DIA4P38705 446 aaPredicted RBP8.82□□□□□ -1
AMF1YOR378W BTT1P40314 149 aaPredicted RBP8.82□□□□□ -1
AMF1YOR378W INA22P40576 216 aa8.82□□□□□ -1
AMF1YOR378W MKT1P40850 830 aaKnown RBP8.82□□□□□ -1
AMF1YOR378W ATG36P46983 293 aa8.82□□□□□ -1
AMF1YOR378W ACM1Q08981 209 aa8.82□□□□□ -1
AMF1YOR378W SPE3Q12074 293 aaKnown RBP8.82□□□□□ -1
AMF1YOR378W GCR1P07261 785 aa8.81□□□□□ -1
AMF1YOR378W SPE1P08432 466 aa8.81□□□□□ -1
AMF1YOR378W PEP5P12868 1029 aa8.81□□□□□ -1
AMF1YOR378W GPI10P30777 616 aa8.81□□□□□ -1
AMF1YOR378W SYN8P31377 255 aa8.81□□□□□ -1
AMF1YOR378W HXT3P32466 567 aaKnown RBP8.81□□□□□ -1
AMF1YOR378W HSP78P33416 811 aa8.81□□□□□ -1
AMF1YOR378W RPC37P36121 282 aa8.81□□□□□ -1
AMF1YOR378W FSH1P38777 243 aaKnown RBP8.81□□□□□ -1
AMF1YOR378W MNN11P46985 422 aaKnown RBP8.81□□□□□ -1
AMF1YOR378W ALY2P47029 1046 aa8.81□□□□□ -1
AMF1YOR378W INA17Q02888 182 aa8.81□□□□□ -1
AMF1YOR378W SVS1Q12254 260 aa8.81□□□□□ -1
AMF1YOR378W RAD16P31244 790 aa8.8□□□□□ -1
AMF1YOR378W MUD2P36084 527 aaKnown RBP8.8□□□□□ -1
AMF1YOR378W LAM1P38851 1228 aa8.8□□□□□ -1
AMF1YOR378W AIM18P38884 321 aa8.8□□□□□ -1
AMF1YOR378W RRT5P43607 289 aa8.8□□□□□ -1
AMF1YOR378W YJR039WP47107 1121 aa8.8□□□□□ -1
AMF1YOR378W COP1P53622 1201 aaKnown RBP8.8□□□□□ -1
AMF1YOR378W YLL056CQ12177 298 aa8.8□□□□□ -1
AMF1YOR378W NDJ1Q12366 352 aa8.8□□□□□ -1
AMF1YOR378W CDC24P11433 854 aaPredicted RBP8.8□□□□□ -1
AMF1YOR378W MET16P18408 261 aaPredicted RBP8.8□□□□□ -1
AMF1YOR378W PEX1P24004 1043 aa8.8□□□□□ -1
AMF1YOR378W DUG2P38149 878 aa8.8□□□□□ -1
AMF1YOR378W ECM13P38195 257 aa8.8□□□□□ -1
AMF1YOR378W BIT2P38346 545 aa8.8□□□□□ -1
AMF1YOR378W CKB2P38930 258 aa8.8□□□□□ -1
AMF1YOR378W MND2P40577 368 aa8.8□□□□□ -1
AMF1YOR378W UTP8P53276 713 aaKnown RBP8.8□□□□□ -1
AMF1YOR378W YNL144CP53907 740 aa8.8□□□□□ -1
AMF1YOR378W VPS9P54787 451 aa8.8□□□□□ -1
AMF1YOR378W CDC73Q06697 393 aa8.8□□□□□ -1
AMF1YOR378W LCB4Q12246 624 aa8.8□□□□□ -1
AMF1YOR378W GPM3Q12326 303 aa8.8□□□□□ -1
AMF1YOR378W AVL9Q12500 764 aa8.8□□□□□ -1
AMF1YOR378W YKL068W-AQ3E826 78 aa8.8□□□□□ -1
AMF1YOR378W SEY1Q99287 776 aa8.8□□□□□ -1
AMF1YOR378W QCR6P00127 147 aa8.79□□□□□ -1
AMF1YOR378W RAD1P06777 1100 aa8.79□□□□□ -1
AMF1YOR378W ADH4P10127 382 aa8.79□□□□□ -1
AMF1YOR378W HMG2P12684 1045 aa8.79□□□□□ -1
AMF1YOR378W MGT1P26188 188 aa8.79□□□□□ -1
AMF1YOR378W YME1P32795 747 aa8.79□□□□□ -1
AMF1YOR378W RAD5P32849 1169 aaPredicted RBP8.79□□□□□ -1
AMF1YOR378W SAF1P38352 637 aa8.79□□□□□ -1
AMF1YOR378W SFB3P38810 929 aa8.79□□□□□ -1
AMF1YOR378W NUP60P39705 539 aa8.79□□□□□ -1
AMF1YOR378W STL1P39932 569 aa8.79□□□□□ -1
AMF1YOR378W RTT101P47050 842 aa8.79□□□□□ -1
AMF1YOR378W PSP1P50896 841 aaKnown RBP8.79□□□□□ -1
AMF1YOR378W ARA2Q04212 335 aa8.79□□□□□ -1
AMF1YOR378W GRX8Q05926 109 aa8.79□□□□□ -1
AMF1YOR378W PIG1Q06216 648 aa8.79□□□□□ -1
AMF1YOR378W PUF2Q12221 1075 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
AMF1YOR378W RRD2Q12461 358 aa8.79□□□□□ -1
AMF1YOR378W EFG1Q3E705 233 aaKnown RBP8.79□□□□□ -1
AMF1YOR378W HIS1P00498 297 aaKnown RBP8.78□□□□□ -1
AMF1YOR378W MTF1P14908 341 aaKnown RBP8.78□□□□□ -1
AMF1YOR378W CBF1P17106 351 aa8.78□□□□□ -1
AMF1YOR378W YJL132WP47014 750 aa8.78□□□□□ -1
AMF1YOR378W RSM26P47141 266 aa8.78□□□□□ -1
AMF1YOR378W TCB2P48231 1178 aa8.78□□□□□ -1
AMF1YOR378W MRX6P48564 524 aa8.78□□□□□ -1
AMF1YOR378W YGR127WP53275 312 aa8.78□□□□□ -1
AMF1YOR378W CPR6P53691 371 aaKnown RBP8.78□□□□□ -1
AMF1YOR378W COG6P53959 839 aa8.78□□□□□ -1
AMF1YOR378W STE23Q06010 1027 aa8.78□□□□□ -1
AMF1YOR378W ENO2P00925 437 aaKnown RBP8.77□□□□□ -1.01
AMF1YOR378W MSR1P38714 643 aa8.77□□□□□ -1.01
AMF1YOR378W EDC3P39998 551 aaKnown RBP8.77□□□□□ -1.01
AMF1YOR378W SCC4P40090 624 aa8.77□□□□□ -1.01
AMF1YOR378W CNN1P43618 361 aa8.77□□□□□ -1.01
AMF1YOR378W YJR079WP47126 109 aa8.77□□□□□ -1.01
AMF1YOR378W PCL10P53124 433 aa8.77□□□□□ -1.01
AMF1YOR378W NMA111P53920 997 aa8.77□□□□□ -1.01
AMF1YOR378W RNT1Q02555 471 aa8.77□□□□□ -1.01
AMF1YOR378W MSH6Q03834 1242 aa8.77□□□□□ -1.01
AMF1YOR378W YMR027WQ04371 470 aa8.77□□□□□ -1.01
AMF1YOR378W PNP1Q05788 311 aa8.77□□□□□ -1.01
AMF1YOR378W YPQ1Q12010 308 aa8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 201 ms