RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W TDA3P38758 523 aa11.07□□□□□ -0.64
PRE6YOL038W PYK2P52489 506 aaKnown RBP11.07□□□□□ -0.64
PRE6YOL038W BET4Q00618 327 aa11.07□□□□□ -0.64
PRE6YOL038W PER33Q12144 273 aa11.07□□□□□ -0.64
PRE6YOL038W PHO13P19881 312 aa11.06□□□□□ -0.64
PRE6YOL038W YJU3P28321 313 aa11.06□□□□□ -0.64
PRE6YOL038W PIK1P39104 1066 aa11.06□□□□□ -0.64
PRE6YOL038W EXO1P39875 702 aa11.06□□□□□ -0.64
PRE6YOL038W CNN1P43618 361 aa11.06□□□□□ -0.64
PRE6YOL038W AMA1P50082 593 aa11.06□□□□□ -0.64
PRE6YOL038W TAN1P53072 289 aaPredicted RBP11.06□□□□□ -0.64
PRE6YOL038W YDR278CQ05612 105 aa11.06□□□□□ -0.64
PRE6YOL038W YLR287CQ05881 355 aa11.06□□□□□ -0.64
PRE6YOL038W YSH1Q06224 779 aaPredicted RBP11.06□□□□□ -0.64
PRE6YOL038W PEX15Q08215 383 aa11.06□□□□□ -0.64
PRE6YOL038W RRP6Q12149 733 aaKnown RBP11.06□□□□□ -0.64
PRE6YOL038W VPS5Q92331 675 aa11.06□□□□□ -0.64
PRE6YOL038W ARL1P38116 183 aaKnown RBP11.05□□□□□ -0.64
PRE6YOL038W NCL1P38205 684 aaKnown RBP11.05□□□□□ -0.64
PRE6YOL038W PPX1P38698 397 aa11.05□□□□□ -0.64
PRE6YOL038W PCF11P39081 626 aaPredicted RBP11.05□□□□□ -0.64
PRE6YOL038W TMN3P40071 706 aa11.05□□□□□ -0.64
PRE6YOL038W BST1P43571 1029 aa11.05□□□□□ -0.64
PRE6YOL038W YGR111WP53265 400 aa11.05□□□□□ -0.64
PRE6YOL038W PEX13P80667 386 aa11.05□□□□□ -0.64
PRE6YOL038W CYC8P14922 966 aa11.04□□□□□ -0.64
PRE6YOL038W AIM26P32858 118 aa11.04□□□□□ -0.64
PRE6YOL038W UTH1P36135 365 aa11.04□□□□□ -0.64
PRE6YOL038W FSH1P38777 243 aaKnown RBP11.04□□□□□ -0.64
PRE6YOL038W CRP1P38845 465 aaKnown RBP11.04□□□□□ -0.64
PRE6YOL038W LAM1P38851 1228 aa11.04□□□□□ -0.64
PRE6YOL038W SAK1P38990 1142 aa11.04□□□□□ -0.64
PRE6YOL038W LYS9P38999 446 aa11.04□□□□□ -0.64
PRE6YOL038W EDC3P39998 551 aaKnown RBP11.04□□□□□ -0.64
PRE6YOL038W YIL054WP40524 105 aa11.04□□□□□ -0.64
PRE6YOL038W DAN4P47179 1161 aa11.04□□□□□ -0.64
PRE6YOL038W YLR046CQ12253 270 aa11.04□□□□□ -0.64
PRE6YOL038W CUP1-1P0CX80 61 aa11.03□□□□□ -0.64
PRE6YOL038W CUP1-2P0CX81 61 aa11.03□□□□□ -0.64
PRE6YOL038W ASG1P40467 964 aa11.03□□□□□ -0.64
PRE6YOL038W SER33P40510 469 aa11.03□□□□□ -0.64
PRE6YOL038W VPS75P53853 264 aa11.03□□□□□ -0.64
PRE6YOL038W PIR1Q03178 341 aa11.03□□□□□ -0.64
PRE6YOL038W YMR187CQ03236 431 aa11.03□□□□□ -0.64
PRE6YOL038W AAD4Q07747 329 aa11.03□□□□□ -0.64
PRE6YOL038W YLR012CQ07927 99 aa11.03□□□□□ -0.64
PRE6YOL038W RAD3P06839 778 aa11.02□□□□□ -0.65
PRE6YOL038W KNS1P32350 737 aaPredicted RBP11.02□□□□□ -0.65
PRE6YOL038W MRPL10P36520 322 aa11.02□□□□□ -0.65
PRE6YOL038W MRX6P48564 524 aa11.02□□□□□ -0.65
PRE6YOL038W PEX31P53203 462 aa11.02□□□□□ -0.65
PRE6YOL038W COP1P53622 1201 aaKnown RBP11.02□□□□□ -0.65
PRE6YOL038W AQR1P53943 586 aa11.02□□□□□ -0.65
PRE6YOL038W ROX1P25042 368 aa11.01□□□□□ -0.65
PRE6YOL038W HXT3P32466 567 aaKnown RBP11.01□□□□□ -0.65
PRE6YOL038W SRX1P36077 127 aa11.01□□□□□ -0.65
PRE6YOL038W SWC5P38326 303 aa11.01□□□□□ -0.65
PRE6YOL038W SET5P38890 526 aaKnown RBP11.01□□□□□ -0.65
PRE6YOL038W BAT1P38891 393 aaKnown RBP11.01□□□□□ -0.65
PRE6YOL038W PRM9P39551 298 aa11.01□□□□□ -0.65
PRE6YOL038W YNL035CP53962 389 aaKnown RBP11.01□□□□□ -0.65
PRE6YOL038W ADI1Q03677 179 aa11.01□□□□□ -0.65
PRE6YOL038W RKM2Q03942 479 aa11.01□□□□□ -0.65
PRE6YOL038W TRX1P22217 103 aaKnown RBP11□□□□□ -0.65
PRE6YOL038W GEX1P25596 615 aa11□□□□□ -0.65
PRE6YOL038W ADY2P25613 283 aa11□□□□□ -0.65
PRE6YOL038W CCR4P31384 837 aaKnown RBP11□□□□□ -0.65
PRE6YOL038W PYC2P32327 1180 aaKnown RBP11□□□□□ -0.65
PRE6YOL038W DCW1P36091 449 aa11□□□□□ -0.65
PRE6YOL038W GEX2P36173 615 aa11□□□□□ -0.65
PRE6YOL038W ATG3P40344 310 aa11□□□□□ -0.65
PRE6YOL038W TFG2P41896 400 aaPredicted RBP11□□□□□ -0.65
PRE6YOL038W RSM7P47150 247 aa11□□□□□ -0.65
PRE6YOL038W EMC4P53073 190 aa11□□□□□ -0.65
PRE6YOL038W SXM1Q04175 944 aaKnown RBP11□□□□□ -0.65
PRE6YOL038W ATG9Q12142 997 aa11□□□□□ -0.65
PRE6YOL038W CSE1P33307 960 aa10.99□□□□□ -0.65
PRE6YOL038W KAP104P38217 918 aaKnown RBP10.99□□□□□ -0.65
PRE6YOL038W YPT35P38815 214 aaKnown RBP10.99□□□□□ -0.65
PRE6YOL038W YMR124WP39523 943 aaKnown RBP10.99□□□□□ -0.65
PRE6YOL038W SAP185P40856 1058 aa10.99□□□□□ -0.65
PRE6YOL038W EMW1P42842 904 aaKnown RBP10.99□□□□□ -0.65
PRE6YOL038W RRT5P43607 289 aa10.99□□□□□ -0.65
PRE6YOL038W AIM23P47015 356 aa10.99□□□□□ -0.65
PRE6YOL038W CDC55Q00362 526 aa10.99□□□□□ -0.65
PRE6YOL038W LCB5Q06147 687 aaKnown RBP10.99□□□□□ -0.65
PRE6YOL038W THI21Q08975 551 aa10.99□□□□□ -0.65
PRE6YOL038W HFA1P32874 2273 aa10.98□□□□□ -0.65
PRE6YOL038W HIS1P00498 297 aaKnown RBP10.98□□□□□ -0.65
PRE6YOL038W ENO1P00924 437 aaKnown RBP10.98□□□□□ -0.65
PRE6YOL038W ADE3P07245 946 aaKnown RBP10.98□□□□□ -0.65
PRE6YOL038W YPK1P12688 680 aaKnown RBP10.98□□□□□ -0.65
PRE6YOL038W DAL81P21657 970 aa10.98□□□□□ -0.65
PRE6YOL038W SPT5P27692 1063 aaKnown RBP10.98□□□□□ -0.65
PRE6YOL038W KHA1P40309 873 aa10.98□□□□□ -0.65
PRE6YOL038W ASN2P49090 572 aaKnown RBP10.98□□□□□ -0.65
PRE6YOL038W NUP84P52891 726 aa10.98□□□□□ -0.65
PRE6YOL038W YNR063WP53749 607 aa10.98□□□□□ -0.65
PRE6YOL038W RPC11Q04307 110 aaPredicted RBP10.98□□□□□ -0.65
PRE6YOL038W NEW1Q08972 1196 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms