RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C TPS2P31688 896 aaKnown RBP11.84□□□□□ -0.51
LCB1YMR296C POP4P38336 279 aa11.84□□□□□ -0.51
LCB1YMR296C QNS1P38795 714 aaKnown RBP11.84□□□□□ -0.51
LCB1YMR296C GPD1Q00055 391 aaKnown RBP11.84□□□□□ -0.51
LCB1YMR296C YDR018CQ12185 396 aa11.84□□□□□ -0.51
LCB1YMR296C CMD1P06787 147 aaKnown RBP11.84□□□□□ -0.51
LCB1YMR296C ILV2P07342 687 aaKnown RBP11.84□□□□□ -0.51
LCB1YMR296C HMG2P12684 1045 aa11.84□□□□□ -0.51
LCB1YMR296C MGT1P26188 188 aa11.84□□□□□ -0.51
LCB1YMR296C NOP4P37838 685 aaKnown RBP11.84□□□□□ -0.51
LCB1YMR296C DUG2P38149 878 aa11.84□□□□□ -0.51
LCB1YMR296C KHA1P40309 873 aa11.84□□□□□ -0.51
LCB1YMR296C VPS25P47142 202 aa11.84□□□□□ -0.51
LCB1YMR296C TRX1P22217 103 aaKnown RBP11.83□□□□□ -0.52
LCB1YMR296C ASG7P46993 209 aa11.83□□□□□ -0.52
LCB1YMR296C ALY2P47029 1046 aa11.83□□□□□ -0.52
LCB1YMR296C MND1P53102 219 aa11.83□□□□□ -0.52
LCB1YMR296C MAP1Q01662 387 aaKnown RBP RIP-Chip data11.83□□□□□ -0.52not detected
LCB1YMR296C HER2Q03557 464 aa11.83□□□□□ -0.52
LCB1YMR296C TRE1Q08919 783 aa11.83□□□□□ -0.52
LCB1YMR296C KEX2P13134 814 aa11.82□□□□□ -0.52
LCB1YMR296C ARG1P22768 420 aa11.82□□□□□ -0.52
LCB1YMR296C MET4P32389 672 aa11.82□□□□□ -0.52
LCB1YMR296C SQT1P35184 431 aa11.82□□□□□ -0.52
LCB1YMR296C YMC2P38087 329 aa11.82□□□□□ -0.52
LCB1YMR296C ALA1P40825 983 aaKnown RBP11.82□□□□□ -0.52
LCB1YMR296C TDA10P42938 290 aa11.82□□□□□ -0.52
LCB1YMR296C SNZ3P43545 298 aa11.82□□□□□ -0.52
LCB1YMR296C YNR014WP53719 212 aa11.82□□□□□ -0.52
LCB1YMR296C SNZ2P53824 298 aa11.82□□□□□ -0.52
LCB1YMR296C FMP25Q08023 583 aa11.82□□□□□ -0.52
LCB1YMR296C RAD59Q12223 238 aa11.82□□□□□ -0.52
LCB1YMR296C PPZ1P26570 692 aa11.81□□□□□ -0.52
LCB1YMR296C MRP4P32902 394 aa11.81□□□□□ -0.52
LCB1YMR296C YBP1P38315 674 aa11.81□□□□□ -0.52
LCB1YMR296C HOP2P53187 214 aa11.81□□□□□ -0.52
LCB1YMR296C YMR027WQ04371 470 aa11.81□□□□□ -0.52
LCB1YMR296C PMR1P13586 950 aa11.81□□□□□ -0.52
LCB1YMR296C LRE1P25579 583 aaKnown RBP11.81□□□□□ -0.52
LCB1YMR296C RAD55P38953 406 aa11.81□□□□□ -0.52
LCB1YMR296C YDR344CQ05510 147 aa11.81□□□□□ -0.52
LCB1YMR296C VPS54Q12071 889 aa11.81□□□□□ -0.52
LCB1YMR296C SPE3Q12074 293 aaKnown RBP11.81□□□□□ -0.52
LCB1YMR296C RGD2P43556 714 aa11.8□□□□□ -0.52
LCB1YMR296C COG6P53959 839 aa11.8□□□□□ -0.52
LCB1YMR296C KAP95Q06142 861 aaKnown RBP11.8□□□□□ -0.52
LCB1YMR296C SAM3Q08986 587 aa11.8□□□□□ -0.52
LCB1YMR296C RIB2Q12362 591 aaKnown RBP11.8□□□□□ -0.52
LCB1YMR296C EMP46Q12396 444 aa11.8□□□□□ -0.52
LCB1YMR296C CDC24P11433 854 aaPredicted RBP11.79□□□□□ -0.52
LCB1YMR296C PEX34P25584 144 aa11.79□□□□□ -0.52
LCB1YMR296C PDB1P32473 366 aaKnown RBP11.79□□□□□ -0.52
LCB1YMR296C TSA1P34760 196 aaKnown RBP11.79□□□□□ -0.52
LCB1YMR296C YKR051WP36142 418 aa11.79□□□□□ -0.52
LCB1YMR296C CDC27P38042 758 aa11.79□□□□□ -0.52
LCB1YMR296C YBR032WP38223 100 aa11.79□□□□□ -0.52
LCB1YMR296C SAW1P39735 261 aa11.79□□□□□ -0.52
LCB1YMR296C ARG2P40360 574 aa11.79□□□□□ -0.52
LCB1YMR296C TMA108P40462 946 aa11.79□□□□□ -0.52
LCB1YMR296C CEG1Q01159 459 aaPredicted RBP11.79□□□□□ -0.52
LCB1YMR296C PML39Q03760 334 aa11.79□□□□□ -0.52
LCB1YMR296C NOB1Q08444 459 aaKnown RBP11.79□□□□□ -0.52
LCB1YMR296C CCH1P50077 2039 aa11.79□□□□□ -0.52
LCB1YMR296C PDR1P12383 1068 aa11.78□□□□□ -0.52
LCB1YMR296C SFB3P38810 929 aa11.78□□□□□ -0.52
LCB1YMR296C FHL1P39521 936 aa11.78□□□□□ -0.52
LCB1YMR296C FLC2P39719 783 aa11.78□□□□□ -0.52
LCB1YMR296C SXM1Q04175 944 aaKnown RBP11.78□□□□□ -0.52
LCB1YMR296C THI7Q05998 598 aa11.78□□□□□ -0.52
LCB1YMR296C TDA5Q06417 326 aaKnown RBP11.78□□□□□ -0.52
LCB1YMR296C CDC73Q06697 393 aa11.78□□□□□ -0.52
LCB1YMR296C RCL1Q08096 367 aaPredicted RBP11.78□□□□□ -0.52
LCB1YMR296C BET2P20133 325 aa11.78□□□□□ -0.52
LCB1YMR296C BAS1P22035 811 aa11.78□□□□□ -0.52
LCB1YMR296C MRPL25P23369 157 aa11.78□□□□□ -0.52
LCB1YMR296C SEC1P30619 724 aaKnown RBP11.78□□□□□ -0.52
LCB1YMR296C RAD16P31244 790 aa11.78□□□□□ -0.52
LCB1YMR296C YBL036CP38197 257 aa11.78□□□□□ -0.52
LCB1YMR296C PFD1P46988 109 aa11.78□□□□□ -0.52
LCB1YMR296C ARO80Q04052 950 aa11.78□□□□□ -0.52
LCB1YMR296C CMS1Q07897 291 aaKnown RBP11.78□□□□□ -0.52
LCB1YMR296C DIS3Q08162 1001 aaKnown RBP11.78□□□□□ -0.52
LCB1YMR296C DDC1Q08949 612 aa11.78□□□□□ -0.52
LCB1YMR296C YPQ1Q12010 308 aa11.78□□□□□ -0.52
LCB1YMR296C FAP7Q12055 197 aaPredicted RBP11.78□□□□□ -0.52
LCB1YMR296C NBP2Q12163 236 aa11.78□□□□□ -0.52
LCB1YMR296C IMG2P25642 146 aaPredicted RBP11.77□□□□□ -0.53
LCB1YMR296C ISF1P32488 338 aa11.77□□□□□ -0.53
LCB1YMR296C YKL097CP34245 136 aa11.77□□□□□ -0.53
LCB1YMR296C DEF1P35732 738 aaKnown RBP11.77□□□□□ -0.53
LCB1YMR296C ABZ1P37254 787 aaPredicted RBP11.77□□□□□ -0.53
LCB1YMR296C HEK2P38199 381 aaKnown RBP RIP-Chip data11.77□□□□□ -0.53 RIP-Chip
LCB1YMR296C SWC5P38326 303 aa11.77□□□□□ -0.53
LCB1YMR296C RPT2P40327 437 aaKnown RBP11.77□□□□□ -0.53
LCB1YMR296C LSB6P42951 607 aa11.77□□□□□ -0.53
LCB1YMR296C GUF1P46943 645 aa11.77□□□□□ -0.53
LCB1YMR296C UTP8P53276 713 aaKnown RBP11.77□□□□□ -0.53
LCB1YMR296C SUB1P54000 292 aaKnown RBP11.77□□□□□ -0.53
LCB1YMR296C ELP3Q02908 557 aaKnown RBP11.77□□□□□ -0.53
LCB1YMR296C PRP4P20053 465 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms