RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C FMP33P46998 180 aa3.62□□□□□ -1.83
SHH3YMR118C NOP9P47077 666 aaKnown RBP3.62□□□□□ -1.83
SHH3YMR118C LIA1P47120 325 aaKnown RBP3.62□□□□□ -1.83
SHH3YMR118C FMS1P50264 508 aa3.62□□□□□ -1.83
SHH3YMR118C USE1P53146 245 aa3.62□□□□□ -1.83
SHH3YMR118C YGR111WP53265 400 aa3.62□□□□□ -1.83
SHH3YMR118C BIO5P53744 561 aaKnown RBP3.62□□□□□ -1.83
SHH3YMR118C NOP15P53927 220 aaPredicted RBP3.62□□□□□ -1.83
SHH3YMR118C COG6P53959 839 aa3.62□□□□□ -1.83
SHH3YMR118C KTR5P53966 522 aaPredicted RBP3.62□□□□□ -1.83
SHH3YMR118C PTA1Q01329 785 aaPredicted RBP3.62□□□□□ -1.83
SHH3YMR118C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
SHH3YMR118C FMN1Q03778 218 aa3.62□□□□□ -1.83
SHH3YMR118C NDL1Q06568 189 aa3.62□□□□□ -1.83
SHH3YMR118C PUN1Q06991 263 aa3.62□□□□□ -1.83
SHH3YMR118C MET7Q08645 548 aa3.62□□□□□ -1.83
SHH3YMR118C WRS1Q12109 432 aaKnown RBP3.62□□□□□ -1.83
SHH3YMR118C CMD1P06787 147 aaKnown RBP3.61□□□□□ -1.83
SHH3YMR118C CDC33P07260 213 aaKnown RBP3.61□□□□□ -1.83
SHH3YMR118C PCK1P10963 549 aa3.61□□□□□ -1.83
SHH3YMR118C PMS1P14242 873 aa3.61□□□□□ -1.83
SHH3YMR118C YAK1P14680 807 aa3.61□□□□□ -1.83
SHH3YMR118C SEC63P14906 663 aa3.61□□□□□ -1.83
SHH3YMR118C EXO70P19658 623 aa3.61□□□□□ -1.83
SHH3YMR118C SFL1P20134 766 aa3.61□□□□□ -1.83
SHH3YMR118C SRM1P21827 482 aa3.61□□□□□ -1.83
SHH3YMR118C PRE8P23639 250 aa3.61□□□□□ -1.83
SHH3YMR118C AAD3P25612 363 aa3.61□□□□□ -1.83
SHH3YMR118C KIP1P28742 1111 aa3.61□□□□□ -1.83
SHH3YMR118C RAD16P31244 790 aa3.61□□□□□ -1.83
SHH3YMR118C TPS2P31688 896 aaKnown RBP3.61□□□□□ -1.83
SHH3YMR118C RRN6P32786 894 aa3.61□□□□□ -1.83
SHH3YMR118C SEC6P32844 805 aa3.61□□□□□ -1.83
SHH3YMR118C YEL1P34225 687 aa3.61□□□□□ -1.83
SHH3YMR118C AST1P35183 429 aa3.61□□□□□ -1.83
SHH3YMR118C MRP8P35719 219 aa3.61□□□□□ -1.83
SHH3YMR118C NUP120P35729 1037 aa3.61□□□□□ -1.83
SHH3YMR118C HES1P35843 434 aa3.61□□□□□ -1.83
SHH3YMR118C KES1P35844 434 aaKnown RBP3.61□□□□□ -1.83
SHH3YMR118C YKR015CP36111 568 aa3.61□□□□□ -1.83
SHH3YMR118C YBP1P38315 674 aa3.61□□□□□ -1.83
SHH3YMR118C SUL1P38359 859 aa3.61□□□□□ -1.83
SHH3YMR118C YHL008CP38750 627 aa3.61□□□□□ -1.83
SHH3YMR118C AIM46P38885 310 aa3.61□□□□□ -1.83
SHH3YMR118C STN1P38960 494 aa3.61□□□□□ -1.83
SHH3YMR118C OAF1P39720 1047 aaPredicted RBP3.61□□□□□ -1.83
SHH3YMR118C YTA12P40341 825 aa3.61□□□□□ -1.83
SHH3YMR118C RLP7P40693 322 aaKnown RBP3.61□□□□□ -1.83
SHH3YMR118C DIM1P41819 318 aaKnown RBP3.61□□□□□ -1.83
SHH3YMR118C TAF1P46677 1066 aa3.61□□□□□ -1.83
SHH3YMR118C VMA10P48836 114 aaKnown RBP3.61□□□□□ -1.83
SHH3YMR118C RNR4P49723 345 aaKnown RBP3.61□□□□□ -1.83
SHH3YMR118C MIG2P53035 382 aa3.61□□□□□ -1.83
SHH3YMR118C YGR016WP53209 190 aa3.61□□□□□ -1.83
SHH3YMR118C DRN1P53255 507 aaKnown RBP3.61□□□□□ -1.83
SHH3YMR118C LSB1P53281 241 aa3.61□□□□□ -1.83
SHH3YMR118C NCE103P53615 221 aa3.61□□□□□ -1.83
SHH3YMR118C SFB2P53953 876 aa3.61□□□□□ -1.83
SHH3YMR118C DAK1P54838 584 aaKnown RBP3.61□□□□□ -1.83
SHH3YMR118C TIM8P57744 87 aa3.61□□□□□ -1.83
SHH3YMR118C OSH6Q02201 448 aa3.61□□□□□ -1.83
SHH3YMR118C OYE2Q03558 400 aaKnown RBP3.61□□□□□ -1.83
SHH3YMR118C ACL4Q03771 387 aa3.61□□□□□ -1.83
SHH3YMR118C MSH6Q03834 1242 aa3.61□□□□□ -1.83
SHH3YMR118C UFO1Q04511 668 aa3.61□□□□□ -1.83
SHH3YMR118C YML083CQ04526 418 aa3.61□□□□□ -1.83
SHH3YMR118C RLP24Q07915 199 aaKnown RBP3.61□□□□□ -1.83
SHH3YMR118C SOG2Q08817 791 aa3.61□□□□□ -1.83
SHH3YMR118C OXR1Q08952 273 aa3.61□□□□□ -1.83
SHH3YMR118C VIK1Q12045 647 aa3.61□□□□□ -1.83
SHH3YMR118C GET4Q12125 312 aa3.61□□□□□ -1.83
SHH3YMR118C MSH5Q12175 901 aa3.61□□□□□ -1.83
SHH3YMR118C PGK1P00560 416 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C SSC1P0CS90 654 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C PHO8P11491 566 aa3.6□□□□□ -1.83
SHH3YMR118C SSA4P22202 642 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C DPB2P24482 689 aaPredicted RBP3.6□□□□□ -1.83
SHH3YMR118C SNT1P25357 1226 aa3.6□□□□□ -1.83
SHH3YMR118C RNQ1P25367 405 aa3.6□□□□□ -1.83
SHH3YMR118C MGT1P26188 188 aa3.6□□□□□ -1.83
SHH3YMR118C CUE2P36075 443 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C TFA2P36145 328 aa3.6□□□□□ -1.83
SHH3YMR118C PAM1P37304 830 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C DUG2P38149 878 aa3.6□□□□□ -1.83
SHH3YMR118C UBP13P38187 747 aa3.6□□□□□ -1.83
SHH3YMR118C FES1P38260 290 aa3.6□□□□□ -1.83
SHH3YMR118C EXO84P38261 753 aa3.6□□□□□ -1.83
SHH3YMR118C TRM5P38793 499 aa3.6□□□□□ -1.83
SHH3YMR118C PFK26P40433 827 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C DPH1P40487 425 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C LCB2P40970 561 aa3.6□□□□□ -1.83
SHH3YMR118C YRB1P41920 201 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C RGD2P43556 714 aa3.6□□□□□ -1.83
SHH3YMR118C RBL2P48606 106 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C YML6P51998 286 aa3.6□□□□□ -1.83
SHH3YMR118C TMA20P89886 181 aaPredicted RBP3.6□□□□□ -1.83
SHH3YMR118C YKR005CQ02203 525 aa3.6□□□□□ -1.83
SHH3YMR118C YDR476CQ03362 224 aa3.6□□□□□ -1.83
SHH3YMR118C GIS1Q03833 894 aa3.6□□□□□ -1.83
SHH3YMR118C GRX3Q03835 250 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms