RNA–Protein interactions for RNA: YLR192C

HCR1, Transcript of eIF3j component of translation initiation factor 3 (eIF3), yeastyeast

Gene HCR1, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCR1YLR192C SPE1P08432 466 aa6.21□□□□□ -1.42
HCR1YLR192C CDC60P26637 1090 aaKnown RBP6.21□□□□□ -1.42
HCR1YLR192C GSY2P27472 705 aa6.21□□□□□ -1.42
HCR1YLR192C RPC82P32349 654 aa6.21□□□□□ -1.42
HCR1YLR192C EUG1P32474 517 aa6.21□□□□□ -1.42
HCR1YLR192C MCR1P36060 302 aaKnown RBP6.21□□□□□ -1.42
HCR1YLR192C RTA1P53047 317 aa6.21□□□□□ -1.42
HCR1YLR192C SDA1P53313 767 aaKnown RBP6.21□□□□□ -1.42
HCR1YLR192C CNM67P53865 581 aaKnown RBP6.21□□□□□ -1.42
HCR1YLR192C PTA1Q01329 785 aaPredicted RBP6.21□□□□□ -1.42
HCR1YLR192C PHM6Q05637 104 aa6.21□□□□□ -1.42
HCR1YLR192C ICL2Q12031 575 aa6.21□□□□□ -1.42
HCR1YLR192C MCM4P30665 933 aaKnown RBP6.2□□□□□ -1.42
HCR1YLR192C UTR4P32626 227 aa6.2□□□□□ -1.42
HCR1YLR192C REC104P33323 182 aa6.2□□□□□ -1.42
HCR1YLR192C LST4P34239 828 aa6.2□□□□□ -1.42
HCR1YLR192C GAA1P39012 614 aa6.2□□□□□ -1.42
HCR1YLR192C NOC2P39744 710 aaKnown RBP6.2□□□□□ -1.42
HCR1YLR192C NUP82P40368 713 aa6.2□□□□□ -1.42
HCR1YLR192C CCM1P48237 864 aaPredicted RBP6.2□□□□□ -1.42
HCR1YLR192C CBK1P53894 756 aa6.2□□□□□ -1.42
HCR1YLR192C ORC4P54791 529 aa6.2□□□□□ -1.42
HCR1YLR192C SSL2Q00578 843 aa6.2□□□□□ -1.42
HCR1YLR192C CLU1Q03690 1277 aaKnown RBP6.2□□□□□ -1.42
HCR1YLR192C VMS1Q04311 632 aaKnown RBP6.2□□□□□ -1.42
HCR1YLR192C YLR224WQ05947 369 aa6.2□□□□□ -1.42
HCR1YLR192C WHI4Q07655 649 aaKnown RBP6.2□□□□□ -1.42
HCR1YLR192C TUF1P02992 437 aaKnown RBP6.19□□□□□ -1.42
HCR1YLR192C PHR1P05066 565 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
HCR1YLR192C HIS5P07172 385 aa6.19□□□□□ -1.42
HCR1YLR192C GSY1P23337 708 aa6.19□□□□□ -1.42
HCR1YLR192C SRP40P32583 406 aaPredicted RBP6.19□□□□□ -1.42
HCR1YLR192C HUL4P40985 892 aa6.19□□□□□ -1.42
HCR1YLR192C CHA4P43634 648 aa6.19□□□□□ -1.42
HCR1YLR192C UBA2P52488 636 aa6.19□□□□□ -1.42
HCR1YLR192C AIM33Q04516 312 aa6.19□□□□□ -1.42
HCR1YLR192C HCR1Q05775 265 aaKnown RBP6.19□□□□□ -1.42
HCR1YLR192C MDM20Q12387 796 aaKnown RBP6.19□□□□□ -1.42
HCR1YLR192C PGK1P00560 416 aaKnown RBP6.18□□□□□ -1.42
HCR1YLR192C SAM1P10659 382 aaKnown RBP6.18□□□□□ -1.42
HCR1YLR192C ISY1P21374 235 aaPredicted RBP6.18□□□□□ -1.42
HCR1YLR192C TIM23P32897 222 aa6.18□□□□□ -1.42
HCR1YLR192C BCD1P38772 366 aa6.18□□□□□ -1.42
HCR1YLR192C PLB1P39105 664 aa6.18□□□□□ -1.42
HCR1YLR192C HMF1P40037 129 aaKnown RBP6.18□□□□□ -1.42
HCR1YLR192C UBP6P43593 499 aaKnown RBP6.18□□□□□ -1.42
HCR1YLR192C RAI1P53063 387 aaKnown RBP6.18□□□□□ -1.42
HCR1YLR192C SEC5P89102 971 aa6.18□□□□□ -1.42
HCR1YLR192C WAR1Q03631 944 aa6.18□□□□□ -1.42
HCR1YLR192C TMA10Q06177 86 aa6.18□□□□□ -1.42
HCR1YLR192C NOP12Q08208 459 aaKnown RBP6.18□□□□□ -1.42
HCR1YLR192C SUT2Q12286 268 aa6.18□□□□□ -1.42
HCR1YLR192C ILV1P00927 576 aaKnown RBP6.17□□□□□ -1.42
HCR1YLR192C TKL1P23254 680 aaKnown RBP6.17□□□□□ -1.42
HCR1YLR192C YCR015CP25616 317 aa6.17□□□□□ -1.42
HCR1YLR192C SAC6P32599 642 aaKnown RBP6.17□□□□□ -1.42
HCR1YLR192C MFT1P33441 392 aaKnown RBP6.17□□□□□ -1.42
HCR1YLR192C NDT80P38830 627 aa6.17□□□□□ -1.42
HCR1YLR192C GPD2P41911 440 aaKnown RBP6.17□□□□□ -1.42
HCR1YLR192C PSP2P50109 593 aaKnown RBP6.17□□□□□ -1.42
HCR1YLR192C MCM6P53091 1017 aaKnown RBP6.17□□□□□ -1.42
HCR1YLR192C SSL1Q04673 461 aaPredicted RBP6.17□□□□□ -1.42
HCR1YLR192C GFD1Q04839 188 aaKnown RBP6.17□□□□□ -1.42
HCR1YLR192C YLH47Q06493 454 aa6.17□□□□□ -1.42
HCR1YLR192C YEL076C-AP0CX16 216 aa6.16□□□□□ -1.42
HCR1YLR192C YLR464WP0CX17 216 aa6.16□□□□□ -1.42
HCR1YLR192C PRP22P24384 1145 aaKnown RBP6.16□□□□□ -1.42
HCR1YLR192C CDC15P27636 974 aa6.16□□□□□ -1.42
HCR1YLR192C RPD3P32561 433 aa6.16□□□□□ -1.42
HCR1YLR192C RGT1P32862 1170 aa6.16□□□□□ -1.42
HCR1YLR192C YKL091CP33324 310 aaKnown RBP6.16□□□□□ -1.42
HCR1YLR192C STE13P33894 931 aa6.16□□□□□ -1.42
HCR1YLR192C SAP190P36123 1033 aa6.16□□□□□ -1.42
HCR1YLR192C ADE17P38009 592 aaKnown RBP6.16□□□□□ -1.42
HCR1YLR192C TCD1P38756 429 aa6.16□□□□□ -1.42
HCR1YLR192C GIP4P39732 760 aa6.16□□□□□ -1.42
HCR1YLR192C YEL076CP39971 216 aa6.16□□□□□ -1.42
HCR1YLR192C URM1P40554 99 aaPredicted RBP6.16□□□□□ -1.42
HCR1YLR192C ZPR1P53303 486 aaKnown RBP6.16□□□□□ -1.42
HCR1YLR192C VPS75P53853 264 aa6.16□□□□□ -1.42
HCR1YLR192C RPN4Q03465 531 aa6.16□□□□□ -1.42
HCR1YLR192C ADY4Q05955 493 aa6.16□□□□□ -1.42
HCR1YLR192C YCG1Q06680 1035 aa6.16□□□□□ -1.42
HCR1YLR192C ENV7Q12003 364 aa6.16□□□□□ -1.42
HCR1YLR192C ERP3Q12403 225 aa6.16□□□□□ -1.42
HCR1YLR192C SRD1P09007 221 aa6.15□□□□□ -1.42
HCR1YLR192C CLN3P13365 580 aa6.15□□□□□ -1.42
HCR1YLR192C GAL11P19659 1081 aa6.15□□□□□ -1.42
HCR1YLR192C RME1P32338 300 aaKnown RBP6.15□□□□□ -1.42
HCR1YLR192C TFC4P33339 1025 aa6.15□□□□□ -1.42
HCR1YLR192C SHP1P34223 423 aa6.15□□□□□ -1.42
HCR1YLR192C UBP11P36026 717 aa6.15□□□□□ -1.42
HCR1YLR192C DBP7P36120 742 aaKnown RBP6.15□□□□□ -1.42
HCR1YLR192C TVP38P36164 337 aa6.15□□□□□ -1.42
HCR1YLR192C PBP2P38151 413 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
HCR1YLR192C GGA2P38817 585 aaKnown RBP6.15□□□□□ -1.42
HCR1YLR192C MPT5P39016 859 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
HCR1YLR192C AFG3P39925 761 aa6.15□□□□□ -1.42
HCR1YLR192C CEP3P40969 608 aa6.15□□□□□ -1.42
HCR1YLR192C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms