RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C VPS64Q03944 604 aa2.39□□□□□ -2.03
CSF1YLR087C FAL1Q12099 399 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C NCR1Q12200 1170 aa2.39□□□□□ -2.03
CSF1YLR087C TPK2P06245 380 aa2.39□□□□□ -2.03
CSF1YLR087C NPR1P22211 790 aa2.39□□□□□ -2.03
CSF1YLR087C DBP1P24784 617 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C RVS161P25343 265 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C YPT52P36018 234 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C MSG5P38590 489 aa2.39□□□□□ -2.03
CSF1YLR087C BCD1P38772 366 aa2.39□□□□□ -2.03
CSF1YLR087C BST1P43571 1029 aa2.39□□□□□ -2.03
CSF1YLR087C YGL101WP53144 215 aa2.39□□□□□ -2.03
CSF1YLR087C AVL9Q12500 764 aa2.39□□□□□ -2.03
CSF1YLR087C MATALPHA2P0CY08 210 aa2.39□□□□□ -2.03
CSF1YLR087C HMLALPHA2P0CY09 210 aa2.39□□□□□ -2.03
CSF1YLR087C YLF2P38746 405 aa2.39□□□□□ -2.03
CSF1YLR087C PSY2P40164 858 aa2.39□□□□□ -2.03
CSF1YLR087C JEM1P40358 645 aa2.39□□□□□ -2.03
CSF1YLR087C ULP2P40537 1034 aaPredicted RBP2.39□□□□□ -2.03
CSF1YLR087C RSC4Q02206 625 aa2.39□□□□□ -2.03
CSF1YLR087C BNA7Q04066 261 aa2.39□□□□□ -2.03
CSF1YLR087C YPD1Q07688 167 aa2.39□□□□□ -2.03
CSF1YLR087C SET6Q12529 373 aa2.39□□□□□ -2.03
CSF1YLR087C PCT1P13259 424 aa2.39□□□□□ -2.03
CSF1YLR087C CSM1P25651 190 aa2.39□□□□□ -2.03
CSF1YLR087C SUV3P32580 737 aa2.39□□□□□ -2.03
CSF1YLR087C STE13P33894 931 aa2.39□□□□□ -2.03
CSF1YLR087C SIC1P38634 284 aa2.39□□□□□ -2.03
CSF1YLR087C YEL023CP39992 682 aa2.39□□□□□ -2.03
CSF1YLR087C MDE1P47095 244 aa2.39□□□□□ -2.03
CSF1YLR087C YGL204CP53089 101 aa2.39□□□□□ -2.03
CSF1YLR087C YNL134CP53912 376 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C PUS7Q08647 676 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C ENV9Q08651 330 aa2.39□□□□□ -2.03
CSF1YLR087C TFB4Q12004 338 aa2.39□□□□□ -2.03
CSF1YLR087C YDR018CQ12185 396 aa2.39□□□□□ -2.03
CSF1YLR087C SLO1Q3E784 85 aa2.39□□□□□ -2.03
CSF1YLR087C FSH3Q99369 266 aa2.39□□□□□ -2.03
CSF1YLR087C CDC8P00572 216 aa2.38□□□□□ -2.03
CSF1YLR087C MNE1P24720 663 aa2.38□□□□□ -2.03
CSF1YLR087C PAT1P25644 796 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C MRF1P30775 413 aaPredicted RBP2.38□□□□□ -2.03
CSF1YLR087C ATP3P38077 311 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C OSH3P38713 996 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C SYG1P40528 902 aa2.38□□□□□ -2.03
CSF1YLR087C YIR042CP40586 236 aa2.38□□□□□ -2.03
CSF1YLR087C NPA3P47122 385 aa2.38□□□□□ -2.03
CSF1YLR087C ISM1P48526 1002 aa2.38□□□□□ -2.03
CSF1YLR087C CWH41P53008 833 aa2.38□□□□□ -2.03
CSF1YLR087C YGR042WP53227 271 aa2.38□□□□□ -2.03
CSF1YLR087C CRF1Q04930 467 aa2.38□□□□□ -2.03
CSF1YLR087C SPP382Q06411 708 aaPredicted RBP2.38□□□□□ -2.03
CSF1YLR087C YRR1Q12172 810 aa2.38□□□□□ -2.03
CSF1YLR087C MSH5Q12175 901 aa2.38□□□□□ -2.03
CSF1YLR087C MIS1P09440 975 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C HAP4P14064 554 aa2.38□□□□□ -2.03
CSF1YLR087C SEC21P32074 935 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C YBL055CP34220 418 aaPredicted RBP2.38□□□□□ -2.03
CSF1YLR087C BMH2P34730 273 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C SRP102P36057 244 aaPredicted RBP2.38□□□□□ -2.03
CSF1YLR087C GOS1P38736 223 aa2.38□□□□□ -2.03
CSF1YLR087C MDM31P38880 579 aa2.38□□□□□ -2.03
CSF1YLR087C TIF34P40217 347 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C MCM6P53091 1017 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C ZRG17P53735 605 aa2.38□□□□□ -2.03
CSF1YLR087C GAL83Q04739 417 aa2.38□□□□□ -2.03
CSF1YLR087C MAG2Q06436 670 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C ATG23Q06671 453 aa2.38□□□□□ -2.03
CSF1YLR087C GRC3Q07845 632 aa2.38□□□□□ -2.03
CSF1YLR087C YPL066WQ12194 479 aa2.38□□□□□ -2.03
CSF1YLR087C LSO1Q3E827 93 aa2.38□□□□□ -2.03
CSF1YLR087C VAC17P25591 423 aa2.38□□□□□ -2.03
CSF1YLR087C YBR242WP38331 238 aa2.38□□□□□ -2.03
CSF1YLR087C ARO8P53090 500 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C YGR021WP53212 290 aa2.38□□□□□ -2.03
CSF1YLR087C PEX13P80667 386 aa2.38□□□□□ -2.03
CSF1YLR087C SPR28Q04921 423 aa2.38□□□□□ -2.03
CSF1YLR087C UBX5Q06682 500 aa2.38□□□□□ -2.03
CSF1YLR087C CDA1Q06702 301 aa2.38□□□□□ -2.03
CSF1YLR087C DIB1Q06819 143 aaPredicted RBP2.38□□□□□ -2.03
CSF1YLR087C YDL114WQ07530 308 aa2.38□□□□□ -2.03
CSF1YLR087C RCL1Q08096 367 aaPredicted RBP2.38□□□□□ -2.03
CSF1YLR087C YPL225WQ08971 146 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C PSF3Q12146 194 aa2.38□□□□□ -2.03
CSF1YLR087C MCD1Q12158 566 aa2.38□□□□□ -2.03
CSF1YLR087C ERP4Q12450 207 aa2.38□□□□□ -2.03
CSF1YLR087C MSF1P08425 469 aa2.38□□□□□ -2.03
CSF1YLR087C VAN1P23642 535 aa2.38□□□□□ -2.03
CSF1YLR087C YSP3P25036 478 aa2.38□□□□□ -2.03
CSF1YLR087C OXP1P28273 1286 aa2.38□□□□□ -2.03
CSF1YLR087C CLG1P35190 452 aa2.38□□□□□ -2.03
CSF1YLR087C YDL183CP48569 320 aa2.38□□□□□ -2.03
CSF1YLR087C PSP1P50896 841 aaKnown RBP2.38□□□□□ -2.03
CSF1YLR087C DNM1P54861 757 aa2.38□□□□□ -2.03
CSF1YLR087C CWC27Q02770 301 aa2.38□□□□□ -2.03
CSF1YLR087C GRX5Q02784 150 aa2.38□□□□□ -2.03
CSF1YLR087C AAD16Q02895 342 aa2.38□□□□□ -2.03
CSF1YLR087C ATG26Q06321 1198 aa2.38□□□□□ -2.03
CSF1YLR087C BSP1Q06604 576 aa2.38□□□□□ -2.03
CSF1YLR087C AVO1Q08236 1176 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms