RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W PCF11P39081 626 aaPredicted RBP3.61□□□□□ -1.83
NSP1YJL041W PCI8P40512 444 aa3.61□□□□□ -1.83
NSP1YJL041W INA22P40576 216 aa3.61□□□□□ -1.83
NSP1YJL041W GUS1P46655 708 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
NSP1YJL041W TMA22P47089 198 aaPredicted RBP3.61□□□□□ -1.83
NSP1YJL041W MIG2P53035 382 aa3.61□□□□□ -1.83
NSP1YJL041W TEL2P53038 688 aa3.61□□□□□ -1.83
NSP1YJL041W BET4Q00618 327 aa3.61□□□□□ -1.83
NSP1YJL041W SPO77Q06134 477 aa3.61□□□□□ -1.83
NSP1YJL041W YLR177WQ06251 628 aa3.61□□□□□ -1.83
NSP1YJL041W ATG29Q12092 213 aa3.61□□□□□ -1.83
NSP1YJL041W RPL25P04456 142 aaKnown RBP3.61□□□□□ -1.83
NSP1YJL041W STI1P15705 589 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
NSP1YJL041W TRX1P22217 103 aaKnown RBP3.61□□□□□ -1.83
NSP1YJL041W PRP22P24384 1145 aaKnown RBP3.61□□□□□ -1.83
NSP1YJL041W DPB2P24482 689 aaPredicted RBP3.61□□□□□ -1.83
NSP1YJL041W RMA1P36001 430 aaKnown RBP3.61□□□□□ -1.83
NSP1YJL041W KTR4P38131 464 aa3.61□□□□□ -1.83
NSP1YJL041W ALG3P38179 458 aa3.61□□□□□ -1.83
NSP1YJL041W HEK2P38199 381 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83 RIP-Chip
NSP1YJL041W YBR138CP38277 524 aa3.61□□□□□ -1.83
NSP1YJL041W SIP3P38717 1229 aa3.61□□□□□ -1.83
NSP1YJL041W BCD1P38772 366 aa3.61□□□□□ -1.83
NSP1YJL041W MSS4P38994 779 aa3.61□□□□□ -1.83
NSP1YJL041W ZRG8P40021 1076 aa3.61□□□□□ -1.83
NSP1YJL041W ALD5P40047 520 aaKnown RBP3.61□□□□□ -1.83
NSP1YJL041W AGE2P40529 298 aa3.61□□□□□ -1.83
NSP1YJL041W PAC11P40960 533 aa3.61□□□□□ -1.83
NSP1YJL041W GCD10P41814 478 aa3.61□□□□□ -1.83
NSP1YJL041W RSM26P47141 266 aa3.61□□□□□ -1.83
NSP1YJL041W CWC25P53854 179 aaKnown RBP3.61□□□□□ -1.83
NSP1YJL041W ZDS2P54786 942 aa3.61□□□□□ -1.83
NSP1YJL041W RPL6AQ02326 176 aaKnown RBP3.61□□□□□ -1.83
NSP1YJL041W COX20Q04935 205 aa3.61□□□□□ -1.83
NSP1YJL041W DAS2Q12084 232 aa3.61□□□□□ -1.83
NSP1YJL041W BBP1Q12365 385 aa3.61□□□□□ -1.83
NSP1YJL041W VMR1P38735 1592 aa3.6□□□□□ -1.83
NSP1YJL041W YOR093CQ12275 1648 aa3.6□□□□□ -1.83
NSP1YJL041W CDC8P00572 216 aa3.6□□□□□ -1.83
NSP1YJL041W SPT3P06844 337 aa3.6□□□□□ -1.83
NSP1YJL041W ISY1P21374 235 aaPredicted RBP3.6□□□□□ -1.83
NSP1YJL041W TRK2P28584 889 aa3.6□□□□□ -1.83
NSP1YJL041W SLA2P33338 968 aa3.6□□□□□ -1.83
NSP1YJL041W AST1P35183 429 aa3.6□□□□□ -1.83
NSP1YJL041W PXL1P36166 706 aa3.6□□□□□ -1.83
NSP1YJL041W PGM2P37012 569 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W MRPL16P38064 232 aa3.6□□□□□ -1.83
NSP1YJL041W FAA3P39002 694 aa3.6□□□□□ -1.83
NSP1YJL041W LSM8P47093 109 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W VMA10P48836 114 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W APT1P49435 187 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W ZIP2P53061 704 aa3.6□□□□□ -1.83
NSP1YJL041W PCL10P53124 433 aa3.6□□□□□ -1.83
NSP1YJL041W MNP1P53163 194 aaPredicted RBP3.6□□□□□ -1.83
NSP1YJL041W YGR035CP53222 116 aa3.6□□□□□ -1.83
NSP1YJL041W VPS75P53853 264 aa3.6□□□□□ -1.83
NSP1YJL041W URC2Q04411 772 aa3.6□□□□□ -1.83
NSP1YJL041W RBS1Q05672 457 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W YPD1Q07688 167 aa3.6□□□□□ -1.83
NSP1YJL041W LOT6Q07923 191 aa3.6□□□□□ -1.83
NSP1YJL041W YOR223WQ12015 292 aa3.6□□□□□ -1.83
NSP1YJL041W DCS2Q12123 353 aa3.6□□□□□ -1.83
NSP1YJL041W RTR2Q12378 196 aa3.6□□□□□ -1.83
NSP1YJL041W USO1P25386 1790 aa3.6□□□□□ -1.83
NSP1YJL041W VTH1P40438 1549 aa3.6□□□□□ -1.83
NSP1YJL041W SES1P07284 462 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W STE12P13574 688 aa3.6□□□□□ -1.83
NSP1YJL041W RAD4P14736 754 aa3.6□□□□□ -1.83
NSP1YJL041W PRP5P21372 849 aaPredicted RBP3.6□□□□□ -1.83
NSP1YJL041W CRM1P30822 1084 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W PYC2P32327 1180 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W MEI5P32489 222 aa3.6□□□□□ -1.83
NSP1YJL041W VPH1P32563 840 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W RRN3P36070 627 aa3.6□□□□□ -1.83
NSP1YJL041W GLG1P36143 616 aa3.6□□□□□ -1.83
NSP1YJL041W RXT2P38255 430 aa3.6□□□□□ -1.83
NSP1YJL041W LSM12P38828 187 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W GIM4P40005 111 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W UBP6P43593 499 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W GLG2P47011 380 aa3.6□□□□□ -1.83
NSP1YJL041W LSM1P47017 172 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W HAM1P47119 197 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W YPT11P48559 417 aa3.6□□□□□ -1.83
NSP1YJL041W HFM1P51979 1187 aa3.6□□□□□ -1.83
NSP1YJL041W PEF1P53238 335 aa3.6□□□□□ -1.83
NSP1YJL041W COG2P53271 262 aa3.6□□□□□ -1.83
NSP1YJL041W SPO1P53541 631 aa3.6□□□□□ -1.83
NSP1YJL041W SLT2Q00772 484 aa3.6□□□□□ -1.83
NSP1YJL041W SVL3Q03088 825 aaKnown RBP3.6□□□□□ -1.83
NSP1YJL041W PPM1Q04081 328 aa3.6□□□□□ -1.83
NSP1YJL041W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
NSP1YJL041W DSE3Q08729 430 aa3.6□□□□□ -1.83
NSP1YJL041W VPS54Q12071 889 aa3.6□□□□□ -1.83
NSP1YJL041W EMP46Q12396 444 aa3.6□□□□□ -1.83
NSP1YJL041W BCK1Q01389 1478 aa3.59□□□□□ -1.83
NSP1YJL041W SNF1P06782 633 aaKnown RBP3.59□□□□□ -1.83
NSP1YJL041W SSB1P11484 613 aaKnown RBP3.59□□□□□ -1.83
NSP1YJL041W CDC34P14682 295 aa3.59□□□□□ -1.83
NSP1YJL041W RET1P22276 1149 aaKnown RBP3.59□□□□□ -1.83
NSP1YJL041W SWI4P25302 1093 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms