RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C PRX1P34227 261 aaKnown RBP8.55□□□□□ -1.04
SOD2YHR008C UBP14P38237 781 aaKnown RBP8.55□□□□□ -1.04
SOD2YHR008C YIL108WP40483 696 aaKnown RBP8.55□□□□□ -1.04
SOD2YHR008C SNO2P53823 222 aa8.55□□□□□ -1.04
SOD2YHR008C GPD1Q00055 391 aaKnown RBP8.55□□□□□ -1.04
SOD2YHR008C RSM10Q03201 203 aa8.55□□□□□ -1.04
SOD2YHR008C YLR046CQ12253 270 aa8.55□□□□□ -1.04
SOD2YHR008C SUC2P00724 532 aa8.54□□□□□ -1.04
SOD2YHR008C SPT15P13393 240 aaKnown RBP8.54□□□□□ -1.04
SOD2YHR008C POL30P15873 258 aaKnown RBP8.54□□□□□ -1.04
SOD2YHR008C OM45P16547 393 aa8.54□□□□□ -1.04
SOD2YHR008C GEX1P25596 615 aa8.54□□□□□ -1.04
SOD2YHR008C YIH1P25637 258 aa8.54□□□□□ -1.04
SOD2YHR008C SPT5P27692 1063 aaKnown RBP8.54□□□□□ -1.04
SOD2YHR008C PMT1P33775 817 aa8.54□□□□□ -1.04
SOD2YHR008C CSG2P35206 410 aa8.54□□□□□ -1.04
SOD2YHR008C GEX2P36173 615 aa8.54□□□□□ -1.04
SOD2YHR008C RPT2P40327 437 aaKnown RBP8.54□□□□□ -1.04
SOD2YHR008C PRM1P53835 661 aa8.54□□□□□ -1.04
SOD2YHR008C GPR1Q12361 961 aa8.54□□□□□ -1.04
SOD2YHR008C ENO1P00924 437 aaKnown RBP8.53□□□□□ -1.04
SOD2YHR008C SBP1P10080 294 aaKnown RBP8.53□□□□□ -1.04
SOD2YHR008C ABF1P14164 731 aa8.53□□□□□ -1.04
SOD2YHR008C PSO2P30620 661 aa8.53□□□□□ -1.04
SOD2YHR008C CDC11P32458 415 aa8.53□□□□□ -1.04
SOD2YHR008C RRP3P38712 501 aaKnown RBP8.53□□□□□ -1.04
SOD2YHR008C RPC11Q04307 110 aaPredicted RBP8.53□□□□□ -1.04
SOD2YHR008C PEX15Q08215 383 aa8.53□□□□□ -1.04
SOD2YHR008C SKM1Q12469 655 aa8.53□□□□□ -1.04
SOD2YHR008C PPR1P07272 904 aaPredicted RBP8.52□□□□□ -1.05
SOD2YHR008C YER152CP10356 443 aa8.52□□□□□ -1.05
SOD2YHR008C TRM1P15565 570 aaKnown RBP8.52□□□□□ -1.05
SOD2YHR008C RFT1P38206 574 aaPredicted RBP8.52□□□□□ -1.05
SOD2YHR008C URA8P38627 578 aaPredicted RBP8.52□□□□□ -1.05
SOD2YHR008C DYS1P38791 387 aa8.52□□□□□ -1.05
SOD2YHR008C LAM1P38851 1228 aa8.52□□□□□ -1.05
SOD2YHR008C VAC8P39968 578 aa8.52□□□□□ -1.05
SOD2YHR008C HOS3Q02959 697 aaKnown RBP8.52□□□□□ -1.05
SOD2YHR008C PUF2Q12221 1075 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
SOD2YHR008C HFA1P32874 2273 aa8.51□□□□□ -1.05
SOD2YHR008C CWP1P28319 239 aa8.51□□□□□ -1.05
SOD2YHR008C CYM1P32898 989 aa8.51□□□□□ -1.05
SOD2YHR008C ELO1P39540 310 aa8.51□□□□□ -1.05
SOD2YHR008C STL1P39932 569 aa8.51□□□□□ -1.05
SOD2YHR008C AIM14P53109 570 aa8.51□□□□□ -1.05
SOD2YHR008C COG7P53195 279 aa8.51□□□□□ -1.05
SOD2YHR008C SUR7P54003 302 aa8.51□□□□□ -1.05
SOD2YHR008C PIR1Q03178 341 aa8.51□□□□□ -1.05
SOD2YHR008C COG4Q06096 861 aa8.51□□□□□ -1.05
SOD2YHR008C PNS1Q12412 539 aa8.51□□□□□ -1.05
SOD2YHR008C HRP1Q99383 534 aaKnown RBP8.51□□□□□ -1.05
SOD2YHR008C RPL22AP05749 121 aaKnown RBP8.5□□□□□ -1.05
SOD2YHR008C RPL43AP0CX25 92 aaKnown RBP8.5□□□□□ -1.05
SOD2YHR008C RPL43BP0CX26 92 aa8.5□□□□□ -1.05
SOD2YHR008C MIH1P23748 554 aa8.5□□□□□ -1.05
SOD2YHR008C DAL2P25335 343 aa8.5□□□□□ -1.05
SOD2YHR008C MRP4P32902 394 aa8.5□□□□□ -1.05
SOD2YHR008C NPR3P38742 1146 aa8.5□□□□□ -1.05
SOD2YHR008C KTR7P40504 517 aa8.5□□□□□ -1.05
SOD2YHR008C STU2P46675 888 aa8.5□□□□□ -1.05
SOD2YHR008C TAN1P53072 289 aaPredicted RBP8.5□□□□□ -1.05
SOD2YHR008C ORC3P54790 616 aa8.5□□□□□ -1.05
SOD2YHR008C UBP3Q01477 912 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
SOD2YHR008C APL5Q08951 932 aaKnown RBP8.5□□□□□ -1.05
SOD2YHR008C GNT1Q12096 491 aa8.5□□□□□ -1.05
SOD2YHR008C BEM1P29366 551 aa8.49□□□□□ -1.05
SOD2YHR008C LIP5P32875 414 aa8.49□□□□□ -1.05
SOD2YHR008C SLD2P34252 453 aa8.49□□□□□ -1.05
SOD2YHR008C APM3P38153 483 aa8.49□□□□□ -1.05
SOD2YHR008C TAE1P38340 232 aa8.49□□□□□ -1.05
SOD2YHR008C ALR2P43553 858 aa8.49□□□□□ -1.05
SOD2YHR008C AMA1P50082 593 aa8.49□□□□□ -1.05
SOD2YHR008C HOP2P53187 214 aa8.49□□□□□ -1.05
SOD2YHR008C YLR297WQ05899 129 aa8.49□□□□□ -1.05
SOD2YHR008C CHS7P38843 316 aa8.48□□□□□ -1.05
SOD2YHR008C YEL075CP39972 122 aa8.48□□□□□ -1.05
SOD2YHR008C MTO1P53070 669 aa8.48□□□□□ -1.05
SOD2YHR008C EMC4P53073 190 aa8.48□□□□□ -1.05
SOD2YHR008C YTP1P53584 459 aa8.48□□□□□ -1.05
SOD2YHR008C YNR063WP53749 607 aa8.48□□□□□ -1.05
SOD2YHR008C BNI4P53858 892 aa8.48□□□□□ -1.05
SOD2YHR008C VPS20Q04272 221 aa8.48□□□□□ -1.05
SOD2YHR008C THI20Q08224 551 aa8.48□□□□□ -1.05
SOD2YHR008C PAB1P04147 577 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
SOD2YHR008C YMR018WQ04364 514 aa8.47□□□□□ -1.05
SOD2YHR008C YOL075CQ08234 1294 aa8.47□□□□□ -1.05
SOD2YHR008C SFI1Q12369 946 aa8.47□□□□□ -1.05
SOD2YHR008C PEX11Q12462 236 aa8.47□□□□□ -1.05
SOD2YHR008C SEC39Q12745 709 aa8.47□□□□□ -1.05
SOD2YHR008C IPP1P00817 287 aaKnown RBP8.46□□□□□ -1.06
SOD2YHR008C YKL050CP35736 922 aa8.46□□□□□ -1.06
SOD2YHR008C HSL7P38274 827 aa8.46□□□□□ -1.06
SOD2YHR008C PCA1P38360 1216 aa8.46□□□□□ -1.06
SOD2YHR008C REF2P42073 533 aaPredicted RBP8.46□□□□□ -1.06
SOD2YHR008C GLG2P47011 380 aa8.46□□□□□ -1.06
SOD2YHR008C PUS2P53167 370 aa8.46□□□□□ -1.06
SOD2YHR008C KTR6P54070 446 aa8.46□□□□□ -1.06
SOD2YHR008C DOS2P54858 310 aa8.46□□□□□ -1.06
SOD2YHR008C ADI1Q03677 179 aa8.46□□□□□ -1.06
SOD2YHR008C SPP382Q06411 708 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms