RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W UBC11P52492 156 aa2.58□□□□□ -2
SWR1YDR334W VPS30Q02948 557 aa2.58□□□□□ -2
SWR1YDR334W HRQ1Q05549 1077 aa2.58□□□□□ -2
SWR1YDR334W DUS3Q06053 668 aaKnown RBP2.58□□□□□ -2
SWR1YDR334W NBP2Q12163 236 aa2.58□□□□□ -2
SWR1YDR334W SSK22P25390 1331 aaPredicted RBP2.58□□□□□ -2
SWR1YDR334W RPS18AP0CX55 146 aaKnown RBP2.58□□□□□ -2
SWR1YDR334W RPS18BP0CX56 146 aaPredicted RBP2.58□□□□□ -2
SWR1YDR334W UBC8P28263 218 aa2.58□□□□□ -2
SWR1YDR334W NGG1P32494 702 aa2.58□□□□□ -2
SWR1YDR334W RPT5P33297 434 aaKnown RBP2.58□□□□□ -2
SWR1YDR334W PTH2P34222 208 aa2.58□□□□□ -2
SWR1YDR334W VPS41P38959 992 aa2.58□□□□□ -2
SWR1YDR334W CCT3P39077 534 aaKnown RBP2.58□□□□□ -2
SWR1YDR334W YER158CP40095 573 aa2.58□□□□□ -2
SWR1YDR334W GPP1P41277 250 aaKnown RBP2.58□□□□□ -2
SWR1YDR334W REG1Q00816 1014 aa2.58□□□□□ -2
SWR1YDR334W PRP3Q03338 469 aaPredicted RBP2.58□□□□□ -2
SWR1YDR334W GRX3Q03835 250 aa2.58□□□□□ -2
SWR1YDR334W GYL1Q04322 720 aa2.58□□□□□ -2
SWR1YDR334W SDH5Q08230 162 aa2.58□□□□□ -2
SWR1YDR334W MOT1P32333 1867 aa2.58□□□□□ -2
SWR1YDR334W ERR1P0CX10 437 aa2.58□□□□□ -2
SWR1YDR334W ERR2P0CX11 437 aa2.58□□□□□ -2
SWR1YDR334W SGF29P25554 259 aa2.58□□□□□ -2
SWR1YDR334W AAR2P32357 355 aaPredicted RBP2.58□□□□□ -2
SWR1YDR334W MCD4P36051 919 aa2.58□□□□□ -2
SWR1YDR334W MCM7P38132 845 aa2.58□□□□□ -2
SWR1YDR334W NOP16P40007 231 aaKnown RBP2.58□□□□□ -2
SWR1YDR334W TOK1P40310 691 aa2.58□□□□□ -2
SWR1YDR334W CHA4P43634 648 aa2.58□□□□□ -2
SWR1YDR334W STU2P46675 888 aa2.58□□□□□ -2
SWR1YDR334W SSY5P47002 699 aa2.58□□□□□ -2
SWR1YDR334W GET1P53192 235 aa2.58□□□□□ -2
SWR1YDR334W MRP51Q02950 344 aa2.58□□□□□ -2
SWR1YDR334W IRC4Q03036 179 aa2.58□□□□□ -2
SWR1YDR334W MUB1Q03162 620 aa2.58□□□□□ -2
SWR1YDR334W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
SWR1YDR334W TRE1Q08919 783 aa2.58□□□□□ -2
SWR1YDR334W CET1O13297 549 aaPredicted RBP2.58□□□□□ -2
SWR1YDR334W PAB1P04147 577 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
SWR1YDR334W SES1P07284 462 aaKnown RBP2.58□□□□□ -2
SWR1YDR334W CDC23P16522 626 aa2.58□□□□□ -2
SWR1YDR334W YCR016WP25617 290 aaKnown RBP2.58□□□□□ -2
SWR1YDR334W EFT1P32324 842 aaKnown RBP2.58□□□□□ -2
SWR1YDR334W APL2P36000 726 aaPredicted RBP2.58□□□□□ -2
SWR1YDR334W VPS51P36116 164 aa2.58□□□□□ -2
SWR1YDR334W LAS1P36146 502 aaPredicted RBP2.58□□□□□ -2
SWR1YDR334W MUM2P38236 366 aa2.58□□□□□ -2
SWR1YDR334W ATX1P38636 73 aa2.58□□□□□ -2
SWR1YDR334W CTF8P38877 133 aa2.58□□□□□ -2
SWR1YDR334W MXR1P40029 184 aa2.58□□□□□ -2
SWR1YDR334W NDE1P40215 560 aa2.58□□□□□ -2
SWR1YDR334W YJR061WP40355 935 aa2.58□□□□□ -2
SWR1YDR334W GZF3P42944 551 aaKnown RBP2.58□□□□□ -2
SWR1YDR334W MET12P46151 657 aa2.58□□□□□ -2
SWR1YDR334W DAS1P47005 663 aa2.58□□□□□ -2
SWR1YDR334W YMR027WQ04371 470 aa2.58□□□□□ -2
SWR1YDR334W RCL1Q08096 367 aaPredicted RBP2.58□□□□□ -2
SWR1YDR334W NSI1Q12457 570 aa2.58□□□□□ -2
SWR1YDR334W EXO70P19658 623 aa2.57□□□□□ -2
SWR1YDR334W YCK2P23292 546 aaKnown RBP2.57□□□□□ -2
SWR1YDR334W XRS2P33301 854 aa2.57□□□□□ -2
SWR1YDR334W POL12P38121 705 aaPredicted RBP2.57□□□□□ -2
SWR1YDR334W TOS1P38288 455 aa2.57□□□□□ -2
SWR1YDR334W CRP1P38845 465 aaKnown RBP2.57□□□□□ -2
SWR1YDR334W CCT2P39076 527 aaKnown RBP2.57□□□□□ -2
SWR1YDR334W CCT6P39079 546 aa2.57□□□□□ -2
SWR1YDR334W SEO1P39709 593 aa2.57□□□□□ -2
SWR1YDR334W BUD16P39988 312 aa2.57□□□□□ -2
SWR1YDR334W NIT1P40447 199 aa2.57□□□□□ -2
SWR1YDR334W BUD27P43573 796 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
SWR1YDR334W LOH1P47055 219 aa2.57□□□□□ -2
SWR1YDR334W ERV25P54837 211 aaKnown RBP2.57□□□□□ -2
SWR1YDR334W YPL225WQ08971 146 aaKnown RBP2.57□□□□□ -2
SWR1YDR334W YTM1Q12024 460 aaPredicted RBP2.57□□□□□ -2
SWR1YDR334W VPS54Q12071 889 aa2.57□□□□□ -2
SWR1YDR334W BAG7Q12128 409 aa2.57□□□□□ -2
SWR1YDR334W YPR053CQ6Q5F3 151 aa2.57□□□□□ -2
SWR1YDR334W KIN2P13186 1147 aaKnown RBP2.57□□□□□ -2
SWR1YDR334W MEF1P25039 761 aa2.57□□□□□ -2
SWR1YDR334W NDI1P32340 513 aa2.57□□□□□ -2
SWR1YDR334W RNP1P32385 249 aa2.57□□□□□ -2
SWR1YDR334W ELM1P32801 640 aa2.57□□□□□ -2
SWR1YDR334W RPC34P32910 317 aa2.57□□□□□ -2
SWR1YDR334W YHR078WP38799 552 aa2.57□□□□□ -2
SWR1YDR334W PFS1P38872 237 aa2.57□□□□□ -2
SWR1YDR334W ALP1P38971 573 aa2.57□□□□□ -2
SWR1YDR334W TMA22P47089 198 aaPredicted RBP2.57□□□□□ -2
SWR1YDR334W XPT1P47165 209 aa2.57□□□□□ -2
SWR1YDR334W HEF3P53978 1044 aaKnown RBP2.57□□□□□ -2
SWR1YDR334W UBX4P54730 416 aa2.57□□□□□ -2
SWR1YDR334W DNM1P54861 757 aa2.57□□□□□ -2
SWR1YDR334W TPP1Q03796 238 aa2.57□□□□□ -2
SWR1YDR334W YLR455WQ06188 304 aa2.57□□□□□ -2
SWR1YDR334W CDA1Q06702 301 aa2.57□□□□□ -2
SWR1YDR334W RIB2Q12362 591 aaKnown RBP2.57□□□□□ -2
SWR1YDR334W TUB2P02557 457 aaKnown RBP2.57□□□□□ -2
SWR1YDR334W HSF1P10961 833 aa2.57□□□□□ -2
SWR1YDR334W PRP2P20095 876 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 107.5 ms