RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W BUD22Q04347 519 aaKnown RBP4.31□□□□□ -1.72
TRS85YDR108W YLR001CQ07895 862 aa4.31□□□□□ -1.72
TRS85YDR108W VHS3Q08438 674 aa4.31□□□□□ -1.72
TRS85YDR108W SNU23Q12368 194 aaPredicted RBP4.31□□□□□ -1.72
TRS85YDR108W GSY1P23337 708 aa4.31□□□□□ -1.72
TRS85YDR108W MEF1P25039 761 aa4.31□□□□□ -1.72
TRS85YDR108W SPB1P25582 841 aaPredicted RBP4.31□□□□□ -1.72
TRS85YDR108W MCM4P30665 933 aaKnown RBP4.31□□□□□ -1.72
TRS85YDR108W UBP11P36026 717 aa4.31□□□□□ -1.72
TRS85YDR108W SET3P36124 751 aa4.31□□□□□ -1.72
TRS85YDR108W SHM1P37292 490 aaPredicted RBP4.31□□□□□ -1.72
TRS85YDR108W YHR112CP38716 378 aa4.31□□□□□ -1.72
TRS85YDR108W TDA3P38758 523 aa4.31□□□□□ -1.72
TRS85YDR108W KEL1P38853 1164 aaKnown RBP4.31□□□□□ -1.72
TRS85YDR108W YER137CP40083 148 aaKnown RBP4.31□□□□□ -1.72
TRS85YDR108W DDI1P40087 428 aa4.31□□□□□ -1.72
TRS85YDR108W CNN1P43618 361 aa4.31□□□□□ -1.72
TRS85YDR108W BNA3P47039 444 aaKnown RBP4.31□□□□□ -1.72
TRS85YDR108W LYS4P49367 693 aaPredicted RBP4.31□□□□□ -1.72
TRS85YDR108W NUP84P52891 726 aa4.31□□□□□ -1.72
TRS85YDR108W UBP2Q01476 1272 aa4.31□□□□□ -1.72
TRS85YDR108W SRL4Q03085 281 aa4.31□□□□□ -1.72
TRS85YDR108W SHE9Q04172 456 aa4.31□□□□□ -1.72
TRS85YDR108W UTP5Q04177 643 aaKnown RBP4.31□□□□□ -1.72
TRS85YDR108W RNH1Q04740 348 aa4.31□□□□□ -1.72
TRS85YDR108W GFD1Q04839 188 aaKnown RBP4.31□□□□□ -1.72
TRS85YDR108W FMP42Q04991 504 aa4.31□□□□□ -1.72
TRS85YDR108W DTD1Q07648 150 aaKnown RBP4.31□□□□□ -1.72
TRS85YDR108W ADY3Q07732 790 aa4.31□□□□□ -1.72
TRS85YDR108W MDM20Q12387 796 aaKnown RBP4.31□□□□□ -1.72
TRS85YDR108W APM4Q99186 491 aa4.31□□□□□ -1.72
TRS85YDR108W CDC19P00549 500 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W SIR3P06701 978 aa4.3□□□□□ -1.72
TRS85YDR108W CIT2P08679 460 aa4.3□□□□□ -1.72
TRS85YDR108W RPS6AP0CX37 236 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W RPS6BP0CX38 236 aaPredicted RBP4.3□□□□□ -1.72
TRS85YDR108W GFA1P14742 717 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W SRV2P17555 526 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W CLN2P20438 545 aa4.3□□□□□ -1.72
TRS85YDR108W ILV6P25605 309 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W RPS5P26783 225 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W KRE2P27809 442 aa4.3□□□□□ -1.72
TRS85YDR108W YBL055CP34220 418 aaPredicted RBP4.3□□□□□ -1.72
TRS85YDR108W YKL050CP35736 922 aa4.3□□□□□ -1.72
TRS85YDR108W MET1P36150 593 aa4.3□□□□□ -1.72
TRS85YDR108W TDP1P38319 544 aa4.3□□□□□ -1.72
TRS85YDR108W YBR225WP38321 900 aa4.3□□□□□ -1.72
TRS85YDR108W YAP3P38749 330 aa4.3□□□□□ -1.72
TRS85YDR108W ERP5P38819 212 aa4.3□□□□□ -1.72
TRS85YDR108W BFR1P38934 470 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
TRS85YDR108W SMX2P40204 77 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W YIL077CP40508 320 aa4.3□□□□□ -1.72
TRS85YDR108W SPO22P40511 975 aa4.3□□□□□ -1.72
TRS85YDR108W YJL181WP46987 611 aa4.3□□□□□ -1.72
TRS85YDR108W RMR1P53060 241 aa4.3□□□□□ -1.72
TRS85YDR108W ZIP2P53061 704 aa4.3□□□□□ -1.72
TRS85YDR108W CGR1P53188 120 aa4.3□□□□□ -1.72
TRS85YDR108W YGR016WP53209 190 aa4.3□□□□□ -1.72
TRS85YDR108W PGA2P53903 129 aa4.3□□□□□ -1.72
TRS85YDR108W YNL040WP53960 456 aaPredicted RBP4.3□□□□□ -1.72
TRS85YDR108W MDM1Q01846 1127 aa4.3□□□□□ -1.72
TRS85YDR108W URH1Q04179 340 aa4.3□□□□□ -1.72
TRS85YDR108W GAS4Q08271 471 aa4.3□□□□□ -1.72
TRS85YDR108W VPS54Q12071 889 aa4.3□□□□□ -1.72
TRS85YDR108W YOR093CQ12275 1648 aa4.3□□□□□ -1.72
TRS85YDR108W SPO12P17123 173 aa4.3□□□□□ -1.72
TRS85YDR108W ZIP1P31111 875 aa4.3□□□□□ -1.72
TRS85YDR108W GCG1P32656 232 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W TEF4P36008 412 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W BAP2P38084 609 aa4.3□□□□□ -1.72
TRS85YDR108W GRE3P38715 327 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
TRS85YDR108W YHL017WP38745 532 aa4.3□□□□□ -1.72
TRS85YDR108W BOL3P39724 118 aa4.3□□□□□ -1.72
TRS85YDR108W ALD5P40047 520 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W EMW1P42842 904 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W YJR098CP47139 656 aa4.3□□□□□ -1.72
TRS85YDR108W MRPL50P53724 139 aa4.3□□□□□ -1.72
TRS85YDR108W ALG12P53730 551 aa4.3□□□□□ -1.72
TRS85YDR108W CNM67P53865 581 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W SRT1Q03175 343 aa4.3□□□□□ -1.72
TRS85YDR108W GCN5Q03330 439 aa4.3□□□□□ -1.72
TRS85YDR108W HMO1Q03973 246 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W TAF11Q04226 346 aa4.3□□□□□ -1.72
TRS85YDR108W AFT2Q08957 416 aa4.3□□□□□ -1.72
TRS85YDR108W THP3Q12049 470 aaKnown RBP4.3□□□□□ -1.72
TRS85YDR108W VTH1P40438 1549 aa4.29□□□□□ -1.72
TRS85YDR108W VTH2P40890 1549 aa4.29□□□□□ -1.72
TRS85YDR108W TY1B-BRQ12193 1756 aa4.29□□□□□ -1.72
TRS85YDR108W TY1B-GR3Q12316 1755 aa4.29□□□□□ -1.72
TRS85YDR108W TY1B-ORQ92393 1755 aa4.29□□□□□ -1.72
TRS85YDR108W YLR278CQ05854 1341 aa4.29□□□□□ -1.72
TRS85YDR108W ARG82P07250 355 aa4.29□□□□□ -1.72
TRS85YDR108W NCP1P16603 691 aaKnown RBP4.29□□□□□ -1.72
TRS85YDR108W PFK2P16862 959 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
TRS85YDR108W CAD1P24813 409 aaKnown RBP4.29□□□□□ -1.72
TRS85YDR108W RVS161P25343 265 aaKnown RBP4.29□□□□□ -1.72
TRS85YDR108W YBL010CP32788 280 aa4.29□□□□□ -1.72
TRS85YDR108W RPT5P33297 434 aaKnown RBP4.29□□□□□ -1.72
TRS85YDR108W RFS1P38234 210 aaKnown RBP4.29□□□□□ -1.72
TRS85YDR108W MTW1P39731 289 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms