RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR034C-D	YDR034C-D	RPC11	Q04307	110 aa	Predicted RBP	3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	REX3	Q12090	404 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	LCB1	P25045	558 aa	Known RBP	3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	PUP2	P32379	260 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	CCT6	P39079	546 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	SKP2	P42843	763 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	SLU7	Q02775	382 aa	Known RBP	3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	RGC1	Q06108	1083 aa	Known RBP	3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	VPS36	Q06696	566 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	SMF3	Q12078	473 aa	Predicted RBP	3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	SKS1	Q12505	502 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	SAC7	P17121	654 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	STE14	P32584	239 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	DSD1	P53095	428 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	NNF2	P53253	936 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	INN1	P53901	409 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	NGL2	Q03264	515 aa	Known RBP	3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	MSC2	Q03455	724 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	CRD1	Q07560	283 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	REC107	P21651	314 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	GPI10	P30777	616 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	RPT3	P33298	428 aa	Known RBP	3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	LYS9	P38999	446 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	BUD16	P39988	312 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	GSM1	P42950	618 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	ARC1	P46672	376 aa	Known RBP	3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	TPP1	Q03796	238 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	AIM6	Q07716	390 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	RSB1	Q08417	382 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	YVC1	Q12324	675 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	GCN4	P03069	281 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	YCK1	P23291	538 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	STE50	P25344	346 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	SAP4	P53036	818 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	TAM41	P53230	385 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	ARP9	Q05123	467 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	ENT4	Q07872	247 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	GET3	Q12154	354 aa	Known RBP	3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	ATG11	Q12527	1178 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	VCX1	Q99385	411 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	TUB3	P09734	445 aa	Known RBP	3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	THR1	P17423	357 aa	Known RBP	3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	TRK2	P28584	889 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	DEF1	P35732	738 aa	Known RBP	3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	SRO77	P38163	1010 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	TAF4	P50105	388 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	ORC4	P54791	529 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	SPT7	P35177	1332 aa		3.18	□□□□□ -1.9
YDR034C-D	YDR034C-D	ADE2	P21264	571 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	POA1	P38218	177 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	FLC2	P39719	783 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	YJR061W	P40355	935 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	YMR265C	Q03508	461 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	YMR210W	Q03649	449 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	FRS1	P15624	595 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	RFA1	P22336	621 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	PET127	P32606	800 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	GCS1	P35197	352 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	FSH1	P38777	243 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	PPE1	P38796	400 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	MET18	P40469	1032 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	ERB1	Q04660	807 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	YPR196W	Q06595	470 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	SVS1	Q12254	260 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	TY2A-LR1	P0C2J4	438 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	TY2A-F	P0CX61	438 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	TY2A-GR2	P0CX62	438 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	ERG6	P25087	383 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	TY2A-C	P25383	438 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	EFT1	P32324	842 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	CRG1	P38892	291 aa	RIP-Chip data	3.17	□□□□□ -1.9	not detected
YDR034C-D	YDR034C-D	FYV8	P46949	817 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	NOP9	P47077	666 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	BNI5	P53890	448 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	MUB1	Q03162	620 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	TY2A-DR2	Q03483	438 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	YMR074C	Q04773	145 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	RCO1	Q04779	684 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	YCG1	Q06680	1035 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	GPB1	Q08886	897 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	TY2A-B	Q12260	438 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	COX17	Q12287	69 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	TY2A-OR2	Q12293	438 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	TY2A-DR1	Q12392	438 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	TY2A-OR1	Q12439	438 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	TY2A-DR3	Q99303	438 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	HMG2	P12684	1045 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	GLK1	P17709	500 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	URA7	P28274	579 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	TAF5	P38129	798 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	YNL195C	P40168	261 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	MET28	P40573	187 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	SSY5	P47002	699 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	VPS9	P54787	451 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	ESC8	Q08119	714 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	SPE3	Q12074	293 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	PAR32	Q12515	295 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	SED4	P25365	1065 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	SRO9	P25567	434 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	TFB1	P32776	642 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms