RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	TRZ1	P36159	838 aa	Predicted RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	SBE2	P42223	864 aa	Known RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	EMP47	P43555	445 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	EMC2	P47133	292 aa	Known RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	CLU1	Q03690	1277 aa	Known RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	CDA1	Q06702	301 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	YDL057W	Q07379	328 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	YOR342C	Q12182	319 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	EMP46	Q12396	444 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	MF(ALPHA)1	P01149	165 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	RET1	P22276	1149 aa	Known RBP	4.13	□□□□□ -1.75
VMA1	YDL185W	PAT1	P25644	796 aa	Known RBP	4.13	□□□□□ -1.75
VMA1	YDL185W	HEM3	P28789	327 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	TFC1	P32367	649 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	TFB1	P32776	642 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	SMY2	P32909	740 aa	Known RBP	4.13	□□□□□ -1.75
VMA1	YDL185W	IFA38	P38286	347 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	YHR020W	P38708	688 aa	Known RBP	4.13	□□□□□ -1.75
VMA1	YDL185W	YDR089W	P38966	869 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
VMA1	YDL185W	SEO1	P39709	593 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	YGR125W	P53273	1036 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	SKI8	Q02793	397 aa	Predicted RBP	4.13	□□□□□ -1.75
VMA1	YDL185W	YET2	Q04210	160 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	GYP1	Q08484	637 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	ATG11	Q12527	1178 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	RIT1	P23796	513 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	HIR2	P32480	875 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	TYE7	P33122	291 aa	Predicted RBP	4.13	□□□□□ -1.75
VMA1	YDL185W	UTP9	P38882	575 aa	Known RBP	4.13	□□□□□ -1.75
VMA1	YDL185W	SSP120	P39931	234 aa	Known RBP	4.13	□□□□□ -1.75
VMA1	YDL185W	SAH1	P39954	449 aa	Known RBP	4.13	□□□□□ -1.75
VMA1	YDL185W	RLP7	P40693	322 aa	Known RBP	4.13	□□□□□ -1.75
VMA1	YDL185W	BIR1	P47134	954 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	GNP1	P48813	663 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	CTR1	P49573	406 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	BUD22	Q04347	519 aa	Known RBP	4.13	□□□□□ -1.75
VMA1	YDL185W	YLR297W	Q05899	129 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	SYO1	Q07395	620 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	BRE4	Q07660	1125 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	YEH2	Q07950	538 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	VHS3	Q08438	674 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	TFB4	Q12004	338 aa		4.13	□□□□□ -1.75
VMA1	YDL185W	SEC15	P22224	910 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	PRR1	P28708	518 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	PTP2	P29461	750 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	ETR1	P38071	380 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	DUG2	P38149	878 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	YMR134W	P40207	237 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	ASG1	P40467	964 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	SER33	P40510	469 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	CIT3	P43635	486 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	ALB1	P47019	175 aa	Predicted RBP	4.12	□□□□□ -1.75
VMA1	YDL185W	NBP1	P52919	319 aa	Predicted RBP	4.12	□□□□□ -1.75
VMA1	YDL185W	RBG2	P53295	368 aa	Known RBP	4.12	□□□□□ -1.75
VMA1	YDL185W	PRO2	P54885	456 aa	Known RBP	4.12	□□□□□ -1.75
VMA1	YDL185W	MAK10	Q02197	733 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	RNY1	Q02933	434 aa	Known RBP	4.12	□□□□□ -1.75
VMA1	YDL185W	SPE4	Q12455	300 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	GPA2	P10823	449 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	NMT1	P14743	455 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	SNT1	P25357	1226 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	NCL1	P38205	684 aa	Known RBP	4.12	□□□□□ -1.75
VMA1	YDL185W	APD1	P38281	316 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	SMF2	P38778	549 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	IRC6	P43615	237 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	ALG2	P43636	503 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	MET12	P46151	657 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	MRK1	P50873	501 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	YBP2	P53169	641 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	BIO4	P53630	237 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	CBK1	P53894	756 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	NAN1	Q02931	896 aa	Known RBP	4.12	□□□□□ -1.75
VMA1	YDL185W	INM2	Q05533	292 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	TRE1	Q08919	783 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	ATP16	Q12165	160 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	STB3	Q12427	513 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	TSR4	P25040	408 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	MGT1	P26188	188 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	FRT2	P39734	528 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	PSY2	P40164	858 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	TGL3	P40308	642 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	MAD3	P47074	515 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	MDE1	P47095	244 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	RMR1	P53060	241 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	GLO2	Q05584	274 aa		4.12	□□□□□ -1.75
VMA1	YDL185W	RGC1	Q06108	1083 aa	Known RBP	4.12	□□□□□ -1.75
VMA1	YDL185W	CIT1	P00890	479 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	RAD10	P06838	210 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	PET494	P07390	489 aa	Predicted RBP	4.11	□□□□□ -1.75
VMA1	YDL185W	MRP13	P12686	339 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	CKA2	P19454	339 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	SFL1	P20134	766 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	VPS34	P22543	875 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	YJU2	P28320	278 aa	Predicted RBP	4.11	□□□□□ -1.75
VMA1	YDL185W	SBA1	P28707	216 aa	Known RBP	4.11	□□□□□ -1.75
VMA1	YDL185W	HEM12	P32347	362 aa	Predicted RBP	4.11	□□□□□ -1.75
VMA1	YDL185W	MUD1	P32605	298 aa	Known RBP	4.11	□□□□□ -1.75
VMA1	YDL185W	PEX5	P35056	612 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	CCL1	P37366	393 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms