RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTK1	YDL025C	SPC19	Q03954	165 aa		4.78	□□□□□ -1.64
RTK1	YDL025C	CSR1	Q06705	408 aa	Known RBP	4.78	□□□□□ -1.64
RTK1	YDL025C	PEX19	Q07418	342 aa		4.78	□□□□□ -1.64
RTK1	YDL025C	AAD4	Q07747	329 aa		4.78	□□□□□ -1.64
RTK1	YDL025C	ADE3	P07245	946 aa	Known RBP	4.77	□□□□□ -1.65
RTK1	YDL025C	PCK1	P10963	549 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	AAC3	P18238	307 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	ARG1	P22768	420 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	PRE4	P30657	266 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	RAD16	P31244	790 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	PAH1	P32567	862 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	SIC1	P38634	284 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	NOP16	P40007	231 aa	Known RBP	4.77	□□□□□ -1.65
RTK1	YDL025C	YER010C	P40011	234 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	PRM2	P40534	656 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	TAH11	P47112	604 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	NCS6	P53088	359 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	ECM3	Q99252	613 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	MMS22	Q06164	1454 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	HMG2	P12684	1045 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	SEC15	P22224	910 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	RIT1	P23796	513 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	SET3	P36124	751 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	RPP1	P38786	293 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	CHA4	P43634	648 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	CTH1	P47976	325 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	CTF18	P49956	741 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	RRT6	P53117	311 aa	Predicted RBP	4.77	□□□□□ -1.65
RTK1	YDL025C	ORC3	P54790	616 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	NRG1	Q03125	231 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	ARA2	Q04212	335 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	CRD1	Q07560	283 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	GPB1	Q08886	897 aa		4.77	□□□□□ -1.65
RTK1	YDL025C	BET2	P20133	325 aa		4.76	□□□□□ -1.65
RTK1	YDL025C	ERG6	P25087	383 aa	Known RBP	4.76	□□□□□ -1.65
RTK1	YDL025C	KIN82	P25341	720 aa		4.76	□□□□□ -1.65
RTK1	YDL025C	EMC1	P25574	760 aa		4.76	□□□□□ -1.65
RTK1	YDL025C	MTC7	P32633	139 aa		4.76	□□□□□ -1.65
RTK1	YDL025C	YPT7	P32939	208 aa		4.76	□□□□□ -1.65
RTK1	YDL025C	NPR3	P38742	1146 aa		4.76	□□□□□ -1.65
RTK1	YDL025C	ECM1	P39715	212 aa		4.76	□□□□□ -1.65
RTK1	YDL025C	NOP9	P47077	666 aa	Known RBP	4.76	□□□□□ -1.65
RTK1	YDL025C	UPF3	P48412	387 aa	Known RBP	4.76	□□□□□ -1.65
RTK1	YDL025C	GAD1	Q04792	585 aa		4.76	□□□□□ -1.65
RTK1	YDL025C	SDH5	Q08230	162 aa		4.76	□□□□□ -1.65
RTK1	YDL025C	DIA2	Q08496	732 aa	Predicted RBP	4.76	□□□□□ -1.65
RTK1	YDL025C	DOP1	Q03921	1698 aa		4.76	□□□□□ -1.65
RTK1	YDL025C	MRP7	P12687	371 aa		4.75	□□□□□ -1.65
RTK1	YDL025C	TEF4	P36008	412 aa	Known RBP	4.75	□□□□□ -1.65
RTK1	YDL025C	UBS1	P38290	277 aa		4.75	□□□□□ -1.65
RTK1	YDL025C	CAB2	P40506	365 aa		4.75	□□□□□ -1.65
RTK1	YDL025C	HMO1	Q03973	246 aa	Known RBP	4.75	□□□□□ -1.65
RTK1	YDL025C	POM34	Q12445	299 aa		4.75	□□□□□ -1.65
RTK1	YDL025C	VTC2	P43585	828 aa		4.75	□□□□□ -1.65
RTK1	YDL025C	RBG2	P53295	368 aa	Known RBP	4.75	□□□□□ -1.65
RTK1	YDL025C	SPO1	P53541	631 aa		4.75	□□□□□ -1.65
RTK1	YDL025C	SNO2	P53823	222 aa		4.75	□□□□□ -1.65
RTK1	YDL025C	GSF2	Q04697	403 aa	Known RBP	4.75	□□□□□ -1.65
RTK1	YDL025C	YCG1	Q06680	1035 aa		4.75	□□□□□ -1.65
RTK1	YDL025C	IMH1	Q06704	911 aa	Known RBP	4.75	□□□□□ -1.65
RTK1	YDL025C	BRE4	Q07660	1125 aa		4.75	□□□□□ -1.65
RTK1	YDL025C	HMI1	Q12039	706 aa		4.75	□□□□□ -1.65
RTK1	YDL025C	NPC2	Q12408	173 aa		4.75	□□□□□ -1.65
RTK1	YDL025C	FUM1	P08417	488 aa	Known RBP	4.74	□□□□□ -1.65
RTK1	YDL025C	CNS1	P33313	385 aa		4.74	□□□□□ -1.65
RTK1	YDL025C	CDS1	P38221	457 aa		4.74	□□□□□ -1.65
RTK1	YDL025C	SFB3	P38810	929 aa		4.74	□□□□□ -1.65
RTK1	YDL025C	GSM1	P42950	618 aa		4.74	□□□□□ -1.65
RTK1	YDL025C	TEX1	P53851	422 aa	Known RBP	4.74	□□□□□ -1.65
RTK1	YDL025C	SNO4	Q04902	237 aa		4.74	□□□□□ -1.65
RTK1	YDL025C	TFC6	Q06339	672 aa		4.74	□□□□□ -1.65
RTK1	YDL025C	RXT3	Q07458	294 aa		4.74	□□□□□ -1.65
RTK1	YDL025C	HSP33	Q08914	237 aa	Known RBP	4.74	□□□□□ -1.65
RTK1	YDL025C	HSP32	Q08992	237 aa		4.74	□□□□□ -1.65
RTK1	YDL025C	AIM41	Q12032	185 aa		4.74	□□□□□ -1.65
RTK1	YDL025C	TGL5	Q12043	749 aa		4.74	□□□□□ -1.65
RTK1	YDL025C	TRM11	Q12463	433 aa		4.74	□□□□□ -1.65
RTK1	YDL025C	HRP1	Q99383	534 aa	Known RBP	4.74	□□□□□ -1.65
RTK1	YDL025C	TRP3	P00937	484 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	CDC16	P09798	840 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	CMK1	P27466	446 aa	Known RBP	4.73	□□□□□ -1.65
RTK1	YDL025C	FRD1	P32614	470 aa	Known RBP	4.73	□□□□□ -1.65
RTK1	YDL025C	FTR1	P40088	404 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	LSB3	P43603	459 aa	Known RBP	4.73	□□□□□ -1.65
RTK1	YDL025C	SLU7	Q02775	382 aa	Known RBP	4.73	□□□□□ -1.65
RTK1	YDL025C	ATG21	Q02887	496 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	CTK1	Q03957	528 aa	Known RBP	4.73	□□□□□ -1.65
RTK1	YDL025C	CAD1	P24813	409 aa	Known RBP	4.73	□□□□□ -1.65
RTK1	YDL025C	ARP2	P32381	391 aa	Known RBP	4.73	□□□□□ -1.65
RTK1	YDL025C	TOS1	P38288	455 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	BCD1	P38772	366 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	CRG1	P38892	291 aa	RIP-Chip data	4.73	□□□□□ -1.65	not detected
RTK1	YDL025C	MEF2	P39677	819 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	VFA1	P40080	203 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	LYS14	P40971	790 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	MRPS35	P53292	345 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	TDA9	Q04545	1251 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	TAH18	Q12181	623 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	YDL177C	Q12257	170 aa		4.73	□□□□□ -1.65
RTK1	YDL025C	COX17	Q12287	69 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms