RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT2YDL007W BRO1P48582 844 aa5.67□□□□□ -1.5
RPT2YDL007W RBL2P48606 106 aaKnown RBP5.67□□□□□ -1.5
RPT2YDL007W TAD1P53065 400 aa5.67□□□□□ -1.5
RPT2YDL007W YBP2P53169 641 aa5.67□□□□□ -1.5
RPT2YDL007W YGR125WP53273 1036 aa5.67□□□□□ -1.5
RPT2YDL007W YNL247WP53852 767 aaKnown RBP5.67□□□□□ -1.5
RPT2YDL007W SFB2P53953 876 aa5.67□□□□□ -1.5
RPT2YDL007W HXT15P54854 567 aa5.67□□□□□ -1.5
RPT2YDL007W TIM11P81449 96 aaPredicted RBP5.67□□□□□ -1.5
RPT2YDL007W FMP30Q02883 468 aa5.67□□□□□ -1.5
RPT2YDL007W HFD1Q04458 532 aa5.67□□□□□ -1.5
RPT2YDL007W YLR257WQ06146 321 aaKnown RBP5.67□□□□□ -1.5
RPT2YDL007W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
RPT2YDL007W PPM2Q08282 695 aa5.67□□□□□ -1.5
RPT2YDL007W CHS5Q12114 671 aaKnown RBP5.67□□□□□ -1.5
RPT2YDL007W CLF1Q12309 687 aaPredicted RBP5.67□□□□□ -1.5
RPT2YDL007W ZRT2Q12436 422 aa5.67□□□□□ -1.5
RPT2YDL007W ADR1P07248 1323 aa5.67□□□□□ -1.5
RPT2YDL007W GSC2P40989 1895 aa5.67□□□□□ -1.5
RPT2YDL007W SNA3P14359 133 aa5.66□□□□□ -1.5
RPT2YDL007W ADE2P21264 571 aaKnown RBP5.66□□□□□ -1.5
RPT2YDL007W ATO2P32907 282 aa5.66□□□□□ -1.5
RPT2YDL007W KES1P35844 434 aaKnown RBP5.66□□□□□ -1.5
RPT2YDL007W SEA4P38164 1038 aa5.66□□□□□ -1.5
RPT2YDL007W YHR020WP38708 688 aaKnown RBP5.66□□□□□ -1.5
RPT2YDL007W QNS1P38795 714 aaKnown RBP5.66□□□□□ -1.5
RPT2YDL007W RSP5P39940 809 aaKnown RBP5.66□□□□□ -1.5
RPT2YDL007W GPD2P41911 440 aaKnown RBP5.66□□□□□ -1.5
RPT2YDL007W RPC17P47076 161 aa5.66□□□□□ -1.5
RPT2YDL007W YNR063WP53749 607 aa5.66□□□□□ -1.5
RPT2YDL007W IST1P53843 298 aaPredicted RBP5.66□□□□□ -1.5
RPT2YDL007W HDA1P53973 706 aa5.66□□□□□ -1.5
RPT2YDL007W TPP1Q03796 238 aa5.66□□□□□ -1.5
RPT2YDL007W SHE9Q04172 456 aa5.66□□□□□ -1.5
RPT2YDL007W SPO20Q04359 397 aa5.66□□□□□ -1.5
RPT2YDL007W ARR1Q06596 294 aa5.66□□□□□ -1.5
RPT2YDL007W SPO75Q07798 868 aa5.66□□□□□ -1.5
RPT2YDL007W PUS7Q08647 676 aaKnown RBP5.66□□□□□ -1.5
RPT2YDL007W NBL1Q3E7Y6 73 aa5.66□□□□□ -1.5
RPT2YDL007W YOR111WQ99210 232 aa5.66□□□□□ -1.5
RPT2YDL007W SUI3P09064 285 aaKnown RBP5.65□□□□□ -1.51
RPT2YDL007W ADH4P10127 382 aa5.65□□□□□ -1.51
RPT2YDL007W POL3P15436 1097 aa5.65□□□□□ -1.51
RPT2YDL007W LYP1P32487 611 aa5.65□□□□□ -1.51
RPT2YDL007W PUB1P32588 453 aaKnown RBP RIP-Chip data5.65□□□□□ -1.51not detected
RPT2YDL007W SLA2P33338 968 aa5.65□□□□□ -1.51
RPT2YDL007W VBA5P36172 582 aa5.65□□□□□ -1.51
RPT2YDL007W RXT2P38255 430 aa5.65□□□□□ -1.51
RPT2YDL007W SMC2P38989 1170 aaKnown RBP5.65□□□□□ -1.51
RPT2YDL007W SIP5P40210 489 aaKnown RBP5.65□□□□□ -1.51
RPT2YDL007W PCI8P40512 444 aa5.65□□□□□ -1.51
RPT2YDL007W NMD5P46970 1048 aa5.65□□□□□ -1.51
RPT2YDL007W ATG36P46983 293 aa5.65□□□□□ -1.51
RPT2YDL007W TEL2P53038 688 aa5.65□□□□□ -1.51
RPT2YDL007W YKR005CQ02203 525 aa5.65□□□□□ -1.51
RPT2YDL007W PRP42Q03776 544 aaKnown RBP5.65□□□□□ -1.51
RPT2YDL007W TFC6Q06339 672 aa5.65□□□□□ -1.51
RPT2YDL007W YPL216WQ08964 1102 aa5.65□□□□□ -1.51
RPT2YDL007W TUS1Q06412 1307 aa5.65□□□□□ -1.51
RPT2YDL007W TRP3P00937 484 aa5.64□□□□□ -1.51
RPT2YDL007W RPL24AP04449 155 aaKnown RBP5.64□□□□□ -1.51
RPT2YDL007W CHO2P05374 869 aaKnown RBP5.64□□□□□ -1.51
RPT2YDL007W NUC1P08466 329 aa5.64□□□□□ -1.51
RPT2YDL007W CLN3P13365 580 aa5.64□□□□□ -1.51
RPT2YDL007W ALG1P16661 449 aa5.64□□□□□ -1.51
RPT2YDL007W COQ1P18900 473 aa5.64□□□□□ -1.51
RPT2YDL007W AGP1P25376 633 aa5.64□□□□□ -1.51
RPT2YDL007W SPS22P25380 463 aa5.64□□□□□ -1.51
RPT2YDL007W EFB1P32471 206 aaKnown RBP5.64□□□□□ -1.51
RPT2YDL007W LIP5P32875 414 aa5.64□□□□□ -1.51
RPT2YDL007W KAP114P53067 1004 aa5.64□□□□□ -1.51
RPT2YDL007W COS6P53344 381 aa5.64□□□□□ -1.51
RPT2YDL007W CPR6P53691 371 aaKnown RBP5.64□□□□□ -1.51
RPT2YDL007W COG6P53959 839 aa5.64□□□□□ -1.51
RPT2YDL007W PKH1Q03407 766 aa5.64□□□□□ -1.51
RPT2YDL007W SXM1Q04175 944 aaKnown RBP5.64□□□□□ -1.51
RPT2YDL007W YDR341CQ05506 607 aaKnown RBP5.64□□□□□ -1.51
RPT2YDL007W VIP1Q06685 1146 aaKnown RBP5.64□□□□□ -1.51
RPT2YDL007W MLH2Q07980 695 aa5.64□□□□□ -1.51
RPT2YDL007W NBA1Q08229 501 aaKnown RBP5.64□□□□□ -1.51
RPT2YDL007W TRE1Q08919 783 aa5.64□□□□□ -1.51
RPT2YDL007W YPL260WQ08977 551 aa5.64□□□□□ -1.51
RPT2YDL007W SNU66Q12420 587 aaPredicted RBP5.64□□□□□ -1.51
RPT2YDL007W YDR034W-BQ6Q5X2 51 aa5.64□□□□□ -1.51
RPT2YDL007W SEY1Q99287 776 aa5.64□□□□□ -1.51
RPT2YDL007W OSM1P21375 501 aaKnown RBP5.63□□□□□ -1.51
RPT2YDL007W ADP1P25371 1049 aa5.63□□□□□ -1.51
RPT2YDL007W VPH2P32341 215 aa5.63□□□□□ -1.51
RPT2YDL007W RPN2P32565 945 aaKnown RBP5.63□□□□□ -1.51
RPT2YDL007W YME1P32795 747 aa5.63□□□□□ -1.51
RPT2YDL007W YBL055CP34220 418 aaPredicted RBP5.63□□□□□ -1.51
RPT2YDL007W YKR073CP36153 106 aa5.63□□□□□ -1.51
RPT2YDL007W YBR032WP38223 100 aa5.63□□□□□ -1.51
RPT2YDL007W MNN1P39106 762 aa5.63□□□□□ -1.51
RPT2YDL007W SET2P46995 733 aaKnown RBP5.63□□□□□ -1.51
RPT2YDL007W RIM8P53179 542 aa5.63□□□□□ -1.51
RPT2YDL007W LGE1Q02796 332 aaKnown RBP5.63□□□□□ -1.51
RPT2YDL007W MUB1Q03162 620 aa5.63□□□□□ -1.51
RPT2YDL007W PPM1Q04081 328 aa5.63□□□□□ -1.51
RPT2YDL007W GTB1Q04924 702 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms