RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	RGD2	P43556	714 aa		4.81	□□□□□ -1.64
SWC3	YAL011W	ENV11	P53246	860 aa		4.81	□□□□□ -1.64
SWC3	YAL011W	VTC3	Q02725	835 aa		4.81	□□□□□ -1.64
SWC3	YAL011W	CWC21	Q03375	135 aa	Known RBP	4.81	□□□□□ -1.64
SWC3	YAL011W	YMR114C	Q04471	368 aa	Known RBP	4.81	□□□□□ -1.64
SWC3	YAL011W	ARP9	Q05123	467 aa		4.81	□□□□□ -1.64
SWC3	YAL011W	YLR225C	Q05948	407 aa	Known RBP	4.81	□□□□□ -1.64
SWC3	YAL011W	HDA2	Q06629	674 aa		4.81	□□□□□ -1.64
SWC3	YAL011W	YPR078C	Q06813	372 aa		4.81	□□□□□ -1.64
SWC3	YAL011W	WHI4	Q07655	649 aa	Known RBP	4.81	□□□□□ -1.64
SWC3	YAL011W	SIL1	Q08199	421 aa		4.81	□□□□□ -1.64
SWC3	YAL011W	DAS2	Q12084	232 aa		4.81	□□□□□ -1.64
SWC3	YAL011W	TIF6	Q12522	245 aa	Known RBP	4.81	□□□□□ -1.64
SWC3	YAL011W	STF1	P01098	86 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	CDC9	P04819	755 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	HTA1	P04911	132 aa	Known RBP	4.8	□□□□□ -1.64
SWC3	YAL011W	HTA2	P04912	132 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	RPS9B	P05755	195 aa	Known RBP	4.8	□□□□□ -1.64
SWC3	YAL011W	RAD18	P10862	487 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	PMS1	P14242	873 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	VMA3	P25515	160 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	NUD1	P32336	851 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
SWC3	YAL011W	RPN3	P40016	523 aa	Known RBP	4.8	□□□□□ -1.64
SWC3	YAL011W	RTT105	P40063	208 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	LSM5	P40089	93 aa	Known RBP	4.8	□□□□□ -1.64
SWC3	YAL011W	PCL7	P40186	285 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	MIC19	P43594	170 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	SMC3	P47037	1230 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	LIF1	P53150	421 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	SQS1	P53866	767 aa	Known RBP	4.8	□□□□□ -1.64
SWC3	YAL011W	TIM10	P87108	93 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
SWC3	YAL011W	REX3	Q12090	404 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	YOL114C	Q12322	202 aa		4.8	□□□□□ -1.64
SWC3	YAL011W	SAM1	P10659	382 aa	Known RBP	4.79	□□□□□ -1.64
SWC3	YAL011W	TRX1	P22217	103 aa	Known RBP	4.79	□□□□□ -1.64
SWC3	YAL011W	MSH1	P25846	959 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	RPN2	P32565	945 aa	Known RBP	4.79	□□□□□ -1.64
SWC3	YAL011W	MCD4	P36051	919 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	XDJ1	P39102	459 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	TOK1	P40310	691 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	RMD8	P43620	662 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	CTK3	P46963	296 aa	Predicted RBP	4.79	□□□□□ -1.64
SWC3	YAL011W	CTR1	P49573	406 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	ZIP2	P53061	704 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	NUT1	P53114	1132 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	PCL10	P53124	433 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	YGR250C	P53316	781 aa	Known RBP	4.79	□□□□□ -1.64
SWC3	YAL011W	YML037C	Q03703	340 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	YMR111C	Q04461	462 aa	Predicted RBP	4.79	□□□□□ -1.64
SWC3	YAL011W	MLH2	Q07980	695 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	CUE5	Q08412	411 aa	Known RBP	4.79	□□□□□ -1.64
SWC3	YAL011W	YER152C	P10356	443 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	ERG11	P10614	530 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	PCK1	P10963	549 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	COX11	P19516	300 aa	Known RBP	4.79	□□□□□ -1.64
SWC3	YAL011W	PRP22	P24384	1145 aa	Known RBP	4.79	□□□□□ -1.64
SWC3	YAL011W	DBF4	P32325	704 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	TFB1	P32776	642 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	PTC4	P38089	393 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	YLF2	P38746	405 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	VHR1	P40522	640 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	LAM5	P43560	674 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	KEL2	P50090	882 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	VID30	P53076	958 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	SLD3	P53135	668 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	YGL039W	P53183	348 aa	Known RBP	4.79	□□□□□ -1.64
SWC3	YAL011W	NNF2	P53253	936 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	ARK1	P53974	638 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	DIG1	Q03063	452 aa	Known RBP	4.79	□□□□□ -1.64
SWC3	YAL011W	URH1	Q04179	340 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	YLR297W	Q05899	129 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	SFH1	Q06168	426 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	NOP6	Q07623	225 aa	Known RBP	4.79	□□□□□ -1.64
SWC3	YAL011W	NUR1	Q12066	484 aa		4.79	□□□□□ -1.64
SWC3	YAL011W	PGK1	P00560	416 aa	Known RBP	4.78	□□□□□ -1.64
SWC3	YAL011W	CDC8	P00572	216 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	RAD1	P06777	1100 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	FBP1	P09201	348 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	SWI6	P09959	803 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	DEP1	P31385	405 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	DAL3	P32459	195 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	CBF2	P32504	956 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	RIB7	P33312	244 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	TGL1	P34163	548 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	LDH1	P38139	375 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	UBP13	P38187	747 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	GDT1	P38301	280 aa	Predicted RBP	4.78	□□□□□ -1.64
SWC3	YAL011W	RGD1	P38339	666 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	HSM3	P38348	480 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	PCM1	P38628	557 aa	Known RBP	4.78	□□□□□ -1.64
SWC3	YAL011W	YHR131C	P38835	850 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	TIF11	P38912	153 aa	Known RBP	4.78	□□□□□ -1.64
SWC3	YAL011W	SAH1	P39954	449 aa	Known RBP	4.78	□□□□□ -1.64
SWC3	YAL011W	LCB2	P40970	561 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	KAP114	P53067	1004 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	YGL140C	P53120	1219 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	EAR1	Q03212	550 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	HLR1	Q04429	423 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms