RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Pnpla6Q3TRM4 1355 aa13.78□□□□□ -0.2
Ccdc28b-201ENSMUST00000030586 Myh13B1AR69 1938 aa13.78□□□□□ -0.2
Ccdc28b-201ENSMUST00000030586 Zmynd8A2A484 1235 aaKnown RBP13.77□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Erc2Q6PH08 957 aa13.77□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Trmt2aQ8BNV1 574 aaKnown RBP13.77□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Olfm5Q8BU90 496 aa13.77□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Podxl2Q8CAE9 603 aa13.77□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Tut1Q8R3F9 869 aa13.77□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Pold4Q9CWP8 107 aa13.77□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Stk3Q9JI10 497 aa13.77□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 S1pr4Q9Z0L1 386 aa13.77□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Bcorl1A2AQH4 1781 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Frmd7A2AD83 703 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Usp17ldG5E8G2 545 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Usp17lcG5E8I7 545 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 L1camP11627 1260 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 LtbrP50284 415 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Traf5P70191 558 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Foxn1Q61575 648 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Slain1Q68FF7 579 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Ccdc148Q6P5U8 527 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Myl6bQ8CI43 207 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Kcnq3Q8K3F6 873 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 EhhadhQ9DBM2 718 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Tjap1Q9DCD5 539 aa13.76□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 XdhQ00519 1335 aa13.75□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Prpmp5E9PXN1 296 aa13.75□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 MycnP03966 462 aaKnown RBP13.75□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Vcam1P29533 739 aa13.75□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Eef2P58252 858 aaKnown RBP13.75□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Senp5Q6NXL6 749 aa13.75□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Pramel6Q810Y9 485 aa13.75□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Phf20Q8BLG0 1010 aaKnown RBP13.75□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Ppp4r3bQ922R5 820 aa13.75□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Aox3G3X982 1335 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Gm42688A0A0R3P9D1 673 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 WasP70315 520 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Tbc1d9Q3UYK3 1264 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Ddx49Q4FZF3 480 aaKnown RBP13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Cgnl1Q6AW69 1298 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Ddx55Q6ZPL9 600 aaKnown RBP13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Cnksr2Q80YA9 1032 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Slc4a7Q8BTY2 1034 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Lca5lQ8C0X0 741 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Ccdc142Q8CAI1 738 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Phf20l1Q8CCJ9 1013 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Rhot2Q8JZN7 620 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Bmp2kQ91Z96 1138 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Xrcc4Q924T3 326 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Bcs1lQ9CZP5 418 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Usp34Q6ZQ93 3582 aa13.74□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Bace1P56818 501 aa13.73□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Ppp1r1bQ60829 194 aa13.73□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Secisbp2lQ6A098 1086 aaKnown RBP13.73□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Trim56Q80VI1 734 aaKnown RBP13.73□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Prune1Q8BIW1 454 aa13.73□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Ces1dQ8VCT4 565 aa13.73□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 MlphQ91V27 590 aa13.73□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Atl3Q91YH5 541 aa13.73□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Mei1Q9D4I2 1268 aa13.73□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Appbp2Q9DAX9 585 aa13.73□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 NesQ6P5H2 1864 aaKnown RBP13.73□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Tsc2Q61037 1814 aa13.73□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Myh3P13541 1940 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Pcdhb9E9Q5G2 828 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Slc27a3O88561 667 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 DnttP09838 530 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Serpinb2P12388 415 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Cbx2P30658 519 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Mcm2P97310 904 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Gprin1Q3UNH4 932 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 1700123L14RikQ3V2K7 440 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Tmc4Q7TQ65 694 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 PaoxQ8C0L6 504 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Lmbrd2Q8C561 694 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Smc5Q8CG46 1101 aaKnown RBP13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Cetn4Q8K4K1 168 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 RestQ8VIG1 1082 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Add2Q9QYB8 725 aa13.72□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 AfdnQ9QZQ1 1820 aaKnown RBP13.71□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Mmp20P57748 482 aa13.71□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Irx3P81067 507 aa13.71□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 GnptabQ69ZN6 1235 aa13.71□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Fam196bQ6GQV1 535 aa13.71□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Sulf1Q8K007 870 aa13.71□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 C8aQ8K182 587 aa13.71□□□□□ -0.21
Ccdc28b-201ENSMUST00000030586 Ces1aE9PYP1 563 aa13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Oog1E9Q5G7 496 aa13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Zkscan2G3X952 960 aa13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Mmp10O55123 476 aa13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Mdm2P23804 489 aa13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Eif5P59325 429 aaKnown RBP13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Spryd7Q3TFQ1 196 aa13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Stxbp2Q64324 593 aa13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Ireb2Q811J3 963 aaKnown RBP13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Mb21d2Q8C525 428 aa13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Calhm4Q8CE93 315 aa13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Dbr1Q923B1 550 aa13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Tbc1d7Q9D0K0 293 aa13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Tmod2Q9JKK7 351 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 74.5 ms