Protein–RNA interactions for Protein: P30658

Cbx2, Chromobox protein homolog 2, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx2P30658 Gm25239-201ENSMUST00000174915 86 ntBASIC46.05■■■■■ 4.96
Cbx2P30658 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.81■■■■■ 4.44
Cbx2P30658 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.11■■■■■ 4.33
Cbx2P30658 Gm24109-201ENSMUST00000175489 103 ntBASIC40.13■■■■■ 4.01
Cbx2P30658 Gm15042-201ENSMUST00000120212 883 ntBASIC39.74■■■■□ 3.95
Cbx2P30658 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.89■■■■□ 3.82
Cbx2P30658 Gm15045-201ENSMUST00000117359 883 ntBASIC38.81■■■■□ 3.8
Cbx2P30658 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.74■■■■□ 3.79
Cbx2P30658 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
Cbx2P30658 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
Cbx2P30658 Gm23366-201ENSMUST00000175022 89 ntBASIC38.34■■■■□ 3.73
Cbx2P30658 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.65■■■■□ 3.62
Cbx2P30658 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.29■■■■□ 3.56
Cbx2P30658 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.23■■■■□ 3.55
Cbx2P30658 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Cbx2P30658 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
Cbx2P30658 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Cbx2P30658 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
Cbx2P30658 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.8■■■■□ 3.48
Cbx2P30658 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Cbx2P30658 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
Cbx2P30658 Gm25238-201ENSMUST00000174914 89 ntBASIC36.53■■■■□ 3.44
Cbx2P30658 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
Cbx2P30658 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.47■■■■□ 3.43
Cbx2P30658 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.14■■■■□ 3.38
Cbx2P30658 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.94■■■■□ 3.34
Cbx2P30658 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Cbx2P30658 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.77■■■■□ 3.32
Cbx2P30658 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Cbx2P30658 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.67■■■■□ 3.3
Cbx2P30658 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Cbx2P30658 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
Cbx2P30658 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.52■■■■□ 3.28
Cbx2P30658 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.48■■■■□ 3.27
Cbx2P30658 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.37■■■■□ 3.25
Cbx2P30658 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.25■■■■□ 3.23
Cbx2P30658 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.19■■■■□ 3.22
Cbx2P30658 Gm25262-201ENSMUST00000174934 133 ntBASIC35.16■■■■□ 3.22
Cbx2P30658 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.14■■■■□ 3.22
Cbx2P30658 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Cbx2P30658 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.88■■■■□ 3.17
Cbx2P30658 Gm27325-201ENSMUST00000175467 74 ntBASIC34.75■■■■□ 3.15
Cbx2P30658 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Cbx2P30658 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Cbx2P30658 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
Cbx2P30658 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.59■■■■□ 3.13
Cbx2P30658 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.56■■■■□ 3.12
Cbx2P30658 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
Cbx2P30658 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.11
Cbx2P30658 Gm26115-201ENSMUST00000175605 87 ntBASIC34.48■■■■□ 3.11
Cbx2P30658 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Cbx2P30658 Rab21-202ENSMUST00000218831 843 ntBASIC34.4■■■■□ 3.1
Cbx2P30658 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34.39■■■■□ 3.1
Cbx2P30658 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.37■■■■□ 3.09
Cbx2P30658 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.29■■■■□ 3.08
Cbx2P30658 Gm8109-201ENSMUST00000194076 746 ntBASIC34.28■■■■□ 3.08
Cbx2P30658 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
Cbx2P30658 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Cbx2P30658 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Cbx2P30658 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Cbx2P30658 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
Cbx2P30658 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.05■■■■□ 3.04
Cbx2P30658 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.04■■■■□ 3.04
Cbx2P30658 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.96■■■■□ 3.03
Cbx2P30658 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.9■■■■□ 3.02
Cbx2P30658 Psd-208ENSMUST00000224556 2034 ntBASIC33.89■■■■□ 3.02
Cbx2P30658 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Cbx2P30658 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.74■■■□□ 2.99
Cbx2P30658 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Cbx2P30658 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Cbx2P30658 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.58■■■□□ 2.97
Cbx2P30658 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.58■■■□□ 2.97
Cbx2P30658 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.56■■■□□ 2.96
Cbx2P30658 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.54■■■□□ 2.96
Cbx2P30658 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Cbx2P30658 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Cbx2P30658 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Cbx2P30658 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.42■■■□□ 2.94
Cbx2P30658 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.4■■■□□ 2.94
Cbx2P30658 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.36■■■□□ 2.93
Cbx2P30658 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.3■■■□□ 2.92
Cbx2P30658 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
Cbx2P30658 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Cbx2P30658 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Cbx2P30658 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Cbx2P30658 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.14■■■□□ 2.9
Cbx2P30658 Gm24804-201ENSMUST00000174982 85 ntBASIC33.12■■■□□ 2.89
Cbx2P30658 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.05■■■□□ 2.88
Cbx2P30658 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
Cbx2P30658 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.01■■■□□ 2.88
Cbx2P30658 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33■■■□□ 2.87
Cbx2P30658 Gm27322-201ENSMUST00000184007 104 ntBASIC32.98■■■□□ 2.87
Cbx2P30658 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
Cbx2P30658 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Cbx2P30658 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.91■■■□□ 2.86
Cbx2P30658 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
Cbx2P30658 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Cbx2P30658 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Cbx2P30658 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Cbx2P30658 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.82■■■□□ 2.84
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms