Protein–RNA interactions for Protein: G5E8I7

Usp17lc, Ubiquitin carboxyl-terminal hydrolase 17-like protein C, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp17lcG5E8I7 Gm25239-201ENSMUST00000174915 86 ntBASIC46.43■■■■■ 5.02
Usp17lcG5E8I7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC43.26■■■■■ 4.52
Usp17lcG5E8I7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.52■■■■■ 4.4
Usp17lcG5E8I7 Gm24109-201ENSMUST00000175489 103 ntBASIC40.58■■■■■ 4.09
Usp17lcG5E8I7 Gm15042-201ENSMUST00000120212 883 ntBASIC39.91■■■■□ 3.98
Usp17lcG5E8I7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39.23■■■■□ 3.87
Usp17lcG5E8I7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39.13■■■■□ 3.85
Usp17lcG5E8I7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
Usp17lcG5E8I7 Gm15045-201ENSMUST00000117359 883 ntBASIC38.95■■■■□ 3.83
Usp17lcG5E8I7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
Usp17lcG5E8I7 Gm23366-201ENSMUST00000175022 89 ntBASIC38.63■■■■□ 3.77
Usp17lcG5E8I7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Usp17lcG5E8I7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC38.11■■■■□ 3.69
Usp17lcG5E8I7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.71■■■■□ 3.63
Usp17lcG5E8I7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.7■■■■□ 3.63
Usp17lcG5E8I7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
Usp17lcG5E8I7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Usp17lcG5E8I7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Usp17lcG5E8I7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
Usp17lcG5E8I7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.05■■■■□ 3.52
Usp17lcG5E8I7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
Usp17lcG5E8I7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.98■■■■□ 3.51
Usp17lcG5E8I7 Gm25238-201ENSMUST00000174914 89 ntBASIC36.9■■■■□ 3.5
Usp17lcG5E8I7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.85■■■■□ 3.49
Usp17lcG5E8I7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
Usp17lcG5E8I7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Usp17lcG5E8I7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.08■■■■□ 3.37
Usp17lcG5E8I7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36.01■■■■□ 3.36
Usp17lcG5E8I7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
Usp17lcG5E8I7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.85■■■■□ 3.33
Usp17lcG5E8I7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Usp17lcG5E8I7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.75■■■■□ 3.31
Usp17lcG5E8I7 Gm25262-201ENSMUST00000174934 133 ntBASIC35.6■■■■□ 3.29
Usp17lcG5E8I7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Usp17lcG5E8I7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.49■■■■□ 3.27
Usp17lcG5E8I7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.49■■■■□ 3.27
Usp17lcG5E8I7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.38■■■■□ 3.25
Usp17lcG5E8I7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Usp17lcG5E8I7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.31■■■■□ 3.24
Usp17lcG5E8I7 Psd-208ENSMUST00000224556 2034 ntBASIC35.29■■■■□ 3.24
Usp17lcG5E8I7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.26■■■■□ 3.23
Usp17lcG5E8I7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Usp17lcG5E8I7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.13■■■■□ 3.21
Usp17lcG5E8I7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.08■■■■□ 3.21
Usp17lcG5E8I7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35.03■■■■□ 3.2
Usp17lcG5E8I7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35.03■■■■□ 3.2
Usp17lcG5E8I7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC35.02■■■■□ 3.2
Usp17lcG5E8I7 Gm26115-201ENSMUST00000175605 87 ntBASIC34.97■■■■□ 3.19
Usp17lcG5E8I7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.97■■■■□ 3.19
Usp17lcG5E8I7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Usp17lcG5E8I7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.87■■■■□ 3.17
Usp17lcG5E8I7 Gm27325-201ENSMUST00000175467 74 ntBASIC34.86■■■■□ 3.17
Usp17lcG5E8I7 Gm8109-201ENSMUST00000194076 746 ntBASIC34.75■■■■□ 3.15
Usp17lcG5E8I7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
Usp17lcG5E8I7 Rab21-202ENSMUST00000218831 843 ntBASIC34.62■■■■□ 3.13
Usp17lcG5E8I7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.62■■■■□ 3.13
Usp17lcG5E8I7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Usp17lcG5E8I7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
Usp17lcG5E8I7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.46■■■■□ 3.11
Usp17lcG5E8I7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Usp17lcG5E8I7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Usp17lcG5E8I7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Usp17lcG5E8I7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.28■■■■□ 3.08
Usp17lcG5E8I7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
Usp17lcG5E8I7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Usp17lcG5E8I7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.22■■■■□ 3.07
Usp17lcG5E8I7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
Usp17lcG5E8I7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC34.04■■■■□ 3.04
Usp17lcG5E8I7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Usp17lcG5E8I7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.95■■■■□ 3.03
Usp17lcG5E8I7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Usp17lcG5E8I7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.92■■■■□ 3.02
Usp17lcG5E8I7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.8■■■■□ 3
Usp17lcG5E8I7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■■□ 3
Usp17lcG5E8I7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Usp17lcG5E8I7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
Usp17lcG5E8I7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
Usp17lcG5E8I7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
Usp17lcG5E8I7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Usp17lcG5E8I7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.61■■■□□ 2.97
Usp17lcG5E8I7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.59■■■□□ 2.97
Usp17lcG5E8I7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Usp17lcG5E8I7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Usp17lcG5E8I7 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.56■■■□□ 2.96
Usp17lcG5E8I7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Usp17lcG5E8I7 Gm24804-201ENSMUST00000174982 85 ntBASIC33.54■■■□□ 2.96
Usp17lcG5E8I7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Usp17lcG5E8I7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Usp17lcG5E8I7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Usp17lcG5E8I7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.28■■■□□ 2.92
Usp17lcG5E8I7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
Usp17lcG5E8I7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.23■■■□□ 2.91
Usp17lcG5E8I7 Gm27322-201ENSMUST00000184007 104 ntBASIC33.21■■■□□ 2.91
Usp17lcG5E8I7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC33.17■■■□□ 2.9
Usp17lcG5E8I7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.16■■■□□ 2.9
Usp17lcG5E8I7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.15■■■□□ 2.9
Usp17lcG5E8I7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Usp17lcG5E8I7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
Usp17lcG5E8I7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.08■■■□□ 2.89
Usp17lcG5E8I7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.07■■■□□ 2.88
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms