Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Gm25239-201ENSMUST00000174915 86 ntBASIC45,92■■■■■ 4,94
Mmp20P57748 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42,58■■■■■ 4,41
Mmp20P57748 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41,96■■■■■ 4,31
Mmp20P57748 Gm24109-201ENSMUST00000175489 103 ntBASIC39,9■■■■□ 3,98
Mmp20P57748 Gm15042-201ENSMUST00000120212 883 ntBASIC39,87■■■■□ 3,97
Mmp20P57748 Gm15045-201ENSMUST00000117359 883 ntBASIC38,94■■■■□ 3,82
Mmp20P57748 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38,79■■■■□ 3,8
Mmp20P57748 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38,78■■■■□ 3,8
Mmp20P57748 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38,64■■■■□ 3,78
Mmp20P57748 Gm23366-201ENSMUST00000175022 89 ntBASIC38,31■■■■□ 3,72
Mmp20P57748 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38,12■■■■□ 3,69
Mmp20P57748 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37,94■■■■□ 3,66
Mmp20P57748 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37,49■■■■□ 3,59
Mmp20P57748 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37,32■■■■□ 3,56
Mmp20P57748 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37,24■■■■□ 3,55
Mmp20P57748 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37,01■■■■□ 3,52
Mmp20P57748 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36,94■■■■□ 3,5
Mmp20P57748 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36,87■■■■□ 3,49
Mmp20P57748 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36,82■■■■□ 3,48
Mmp20P57748 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36,77■■■■□ 3,48
Mmp20P57748 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36,52■■■■□ 3,44
Mmp20P57748 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36,49■■■■□ 3,43
Mmp20P57748 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36,47■■■■□ 3,43
Mmp20P57748 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36,4■■■■□ 3,42
Mmp20P57748 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36,35■■■■□ 3,41
Mmp20P57748 Gm25238-201ENSMUST00000174914 89 ntBASIC36,33■■■■□ 3,41
Mmp20P57748 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36,26■■■■□ 3,4
Mmp20P57748 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36,24■■■■□ 3,39
Mmp20P57748 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36,23■■■■□ 3,39
Mmp20P57748 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36,03■■■■□ 3,36
Mmp20P57748 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35,88■■■■□ 3,33
Mmp20P57748 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35,84■■■■□ 3,33
Mmp20P57748 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35,6■■■■□ 3,29
Mmp20P57748 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35,6■■■■□ 3,29
Mmp20P57748 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35,42■■■■□ 3,26
Mmp20P57748 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35,4■■■■□ 3,26
Mmp20P57748 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35,27■■■■□ 3,24
Mmp20P57748 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35,23■■■■□ 3,23
Mmp20P57748 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35,23■■■■□ 3,23
Mmp20P57748 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35,2■■■■□ 3,23
Mmp20P57748 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35,15■■■■□ 3,22
Mmp20P57748 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35,09■■■■□ 3,21
Mmp20P57748 Gm25262-201ENSMUST00000174934 133 ntBASIC34,93■■■■□ 3,18
Mmp20P57748 Gm27325-201ENSMUST00000175467 74 ntBASIC34,9■■■■□ 3,18
Mmp20P57748 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34,87■■■■□ 3,17
Mmp20P57748 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34,83■■■■□ 3,17
Mmp20P57748 Psd-208ENSMUST00000224556 2034 ntBASIC34,72■■■■□ 3,15
Mmp20P57748 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34,67■■■■□ 3,14
Mmp20P57748 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34,55■■■■□ 3,12
Mmp20P57748 Rab21-202ENSMUST00000218831 843 ntBASIC34,44■■■■□ 3,1
Mmp20P57748 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34,41■■■■□ 3,1
Mmp20P57748 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34,4■■■■□ 3,1
Mmp20P57748 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34,37■■■■□ 3,09
Mmp20P57748 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34,34■■■■□ 3,09
Mmp20P57748 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34,3■■■■□ 3,08
Mmp20P57748 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34,25■■■■□ 3,07
Mmp20P57748 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34,21■■■■□ 3,07
Mmp20P57748 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34,19■■■■□ 3,06
Mmp20P57748 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34,16■■■■□ 3,06
Mmp20P57748 Gm26115-201ENSMUST00000175605 87 ntBASIC34,16■■■■□ 3,06
Mmp20P57748 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34,04■■■■□ 3,04
Mmp20P57748 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34,03■■■■□ 3,04
Mmp20P57748 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34,01■■■■□ 3,03
Mmp20P57748 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33,97■■■■□ 3,03
Mmp20P57748 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33,97■■■■□ 3,03
Mmp20P57748 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33,96■■■■□ 3,03
Mmp20P57748 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33,96■■■■□ 3,03
Mmp20P57748 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33,94■■■■□ 3,02
Mmp20P57748 Gm8109-201ENSMUST00000194076 746 ntBASIC33,94■■■■□ 3,02
Mmp20P57748 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33,91■■■■□ 3,02
Mmp20P57748 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33,88■■■■□ 3,01
Mmp20P57748 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33,82■■■■□ 3
Mmp20P57748 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33,79■■■■□ 3
Mmp20P57748 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33,73■■■□□ 2,99
Mmp20P57748 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33,72■■■□□ 2,99
Mmp20P57748 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33,72■■■□□ 2,99
Mmp20P57748 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33,67■■■□□ 2,98
Mmp20P57748 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33,66■■■□□ 2,98
Mmp20P57748 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33,55■■■□□ 2,96
Mmp20P57748 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33,51■■■□□ 2,95
Mmp20P57748 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33,49■■■□□ 2,95
Mmp20P57748 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33,48■■■□□ 2,95
Mmp20P57748 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33,44■■■□□ 2,94
Mmp20P57748 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33,43■■■□□ 2,94
Mmp20P57748 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33,42■■■□□ 2,94
Mmp20P57748 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33,38■■■□□ 2,93
Mmp20P57748 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33,34■■■□□ 2,93
Mmp20P57748 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33,3■■■□□ 2,92
Mmp20P57748 Gm17082-201ENSMUST00000166043 1091 ntBASIC33,24■■■□□ 2,91
Mmp20P57748 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33,23■■■□□ 2,91
Mmp20P57748 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33,18■■■□□ 2,9
Mmp20P57748 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33,17■■■□□ 2,9
Mmp20P57748 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33,15■■■□□ 2,9
Mmp20P57748 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33,15■■■□□ 2,9
Mmp20P57748 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33,07■■■□□ 2,88
Mmp20P57748 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33,02■■■□□ 2,88
Mmp20P57748 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33,01■■■□□ 2,87
Mmp20P57748 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2,87
Mmp20P57748 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2,87
Mmp20P57748 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32,99■■■□□ 2,87
Retrieved 100 of 76,532 protein–RNA pairs in 11,8 ms