RNA–Protein interactions for RNA: YPL020C

ULP1, Transcript of Protease that specifically cleaves Smt3p protein conjugates, yeast

Gene ULP1, Length 1,866 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULP1	YPL020C	SMC6	Q12749	1114 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	MLP2	P40457	1679 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	PAN1	P32521	1480 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
ULP1	YPL020C	SGF29	P25554	259 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	SRO9	P25567	434 aa	Known RBP	4.07	□□□□□ -1.76
ULP1	YPL020C	LRG1	P35688	1017 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	TEF4	P36008	412 aa	Known RBP	4.07	□□□□□ -1.76
ULP1	YPL020C	BYE1	P36106	594 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	APN2	P38207	520 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	YHL012W	P38709	493 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	LRP1	P38801	184 aa	Known RBP	4.07	□□□□□ -1.76
ULP1	YPL020C	KHA1	P40309	873 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	YIL108W	P40483	696 aa	Known RBP	4.07	□□□□□ -1.76
ULP1	YPL020C	RMD8	P43620	662 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	EXG2	P52911	562 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	YNR071C	P53757	342 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	EAR1	Q03212	550 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	FCP1	Q03254	732 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	STP4	Q07351	490 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	RSB1	Q08417	382 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	DIN7	Q12086	430 aa		4.07	□□□□□ -1.76
ULP1	YPL020C	GPM1	P00950	247 aa	Known RBP	4.06	□□□□□ -1.76
ULP1	YPL020C	SAM35	P14693	329 aa		4.06	□□□□□ -1.76
ULP1	YPL020C	SWI4	P25302	1093 aa	Known RBP	4.06	□□□□□ -1.76
ULP1	YPL020C	PRM2	P40534	656 aa		4.06	□□□□□ -1.76
ULP1	YPL020C	CIR1	P42940	261 aa		4.06	□□□□□ -1.76
ULP1	YPL020C	YFL066C	P43538	392 aa		4.06	□□□□□ -1.76
ULP1	YPL020C	ARE2	P53629	642 aa	Known RBP	4.06	□□□□□ -1.76
ULP1	YPL020C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
ULP1	YPL020C	SSL1	Q04673	461 aa	Predicted RBP	4.06	□□□□□ -1.76
ULP1	YPL020C	TRI1	Q05024	226 aa		4.06	□□□□□ -1.76
ULP1	YPL020C	PGA3	Q12746	312 aa	Known RBP	4.06	□□□□□ -1.76
ULP1	YPL020C	SWR1	Q05471	1514 aa		4.06	□□□□□ -1.76
ULP1	YPL020C	RKR1	Q04781	1562 aa		4.06	□□□□□ -1.76
ULP1	YPL020C	SNQ2	P32568	1501 aa	Known RBP	4.05	□□□□□ -1.76
ULP1	YPL020C	CYB2	P00175	591 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	NAT1	P12945	854 aa	Known RBP	4.05	□□□□□ -1.76
ULP1	YPL020C	CMP2	P14747	604 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	OLE1	P21147	510 aa	Known RBP	4.05	□□□□□ -1.76
ULP1	YPL020C	KRR1	P25586	316 aa	Predicted RBP	4.05	□□□□□ -1.76
ULP1	YPL020C	DBF4	P32325	704 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	SAC6	P32599	642 aa	Known RBP	4.05	□□□□□ -1.76
ULP1	YPL020C	FRD1	P32614	470 aa	Known RBP	4.05	□□□□□ -1.76
ULP1	YPL020C	SRP101	P32916	621 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	CNS1	P33313	385 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	MTH1	P35198	433 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	JEM1	P40358	645 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	PSP1	P50896	841 aa	Known RBP	4.05	□□□□□ -1.76
ULP1	YPL020C	ORC4	P54791	529 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	YPL071C	Q02864	156 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	NHA1	Q99271	985 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	ADE3	P07245	946 aa	Known RBP	4.05	□□□□□ -1.76
ULP1	YPL020C	CKA1	P15790	372 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	PDX1	P16451	410 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	RIT1	P23796	513 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	PRS1	P32895	427 aa	Known RBP	4.05	□□□□□ -1.76
ULP1	YPL020C	SAS3	P34218	831 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	PES4	P39684	611 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	NPR2	P39923	615 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	LSM5	P40089	93 aa	Known RBP	4.05	□□□□□ -1.76
ULP1	YPL020C	ARF3	P40994	183 aa	RIP-Chip data	4.05	□□□□□ -1.76	not detected
ULP1	YPL020C	SSY5	P47002	699 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	IMA1	P53051	589 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	BTN2	P53286	410 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	BSC5	P53755	489 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	AAD4	Q07747	329 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	SFI1	Q12369	946 aa		4.05	□□□□□ -1.76
ULP1	YPL020C	TY1A-NL1	Q12391	440 aa	Known RBP	4.05	□□□□□ -1.76
ULP1	YPL020C	PEP1	P32319	1579 aa		4.04	□□□□□ -1.76
ULP1	YPL020C	BUD4	P47136	1447 aa		4.04	□□□□□ -1.76
ULP1	YPL020C	HSF1	P10961	833 aa		4.04	□□□□□ -1.76
ULP1	YPL020C	YKL100C	P34248	587 aa		4.04	□□□□□ -1.76
ULP1	YPL020C	ESL2	P36168	1195 aa		4.04	□□□□□ -1.76
ULP1	YPL020C	YHR033W	P38690	423 aa		4.04	□□□□□ -1.76
ULP1	YPL020C	MTR3	P48240	250 aa	Predicted RBP	4.04	□□□□□ -1.76
ULP1	YPL020C	ATP22	P50273	684 aa	Predicted RBP	4.04	□□□□□ -1.76
ULP1	YPL020C	YGR250C	P53316	781 aa	Known RBP	4.04	□□□□□ -1.76
ULP1	YPL020C	ISA1	Q07821	250 aa	Predicted RBP	4.04	□□□□□ -1.76
ULP1	YPL020C	ZRT2	Q12436	422 aa		4.04	□□□□□ -1.76
ULP1	YPL020C	GCN4	P03069	281 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	URA3	P03962	267 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	ARG3	P05150	338 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	FBP1	P09201	348 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	IME1	P21190	360 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	CWH43	P25618	953 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	ERG3	P32353	365 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	UTP9	P38882	575 aa	Known RBP	4.03	□□□□□ -1.76
ULP1	YPL020C	PEF1	P53238	335 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	SSL2	Q00578	843 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	YMR155W	Q03795	547 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	YDR286C	Q05530	114 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	CDA1	Q06702	301 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	CRD1	Q07560	283 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	HOS1	Q12214	470 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	SKM1	Q12469	655 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	ATG11	Q12527	1178 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	YPR053C	Q6Q5F3	151 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	PDR10	P51533	1564 aa		4.03	□□□□□ -1.76
ULP1	YPL020C	MET17	P06106	444 aa		4.03	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms