RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	NPY1	P53164	384 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	HRQ1	Q05549	1077 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	YLH47	Q06493	454 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	CDD1	Q06549	142 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	APC5	Q08683	685 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	RIM20	Q12033	661 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	SMC6	Q12749	1114 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	SEC62	P21825	274 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	SWI4	P25302	1093 aa	Known RBP	3.18	□□□□□ -1.9
SKP2	YNL311C	NPP2	P39997	493 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	NUP82	P40368	713 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	PCI8	P40512	444 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	YNL011C	P53980	444 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	ENT2	Q05785	613 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	NAG1	Q8TGN9	163 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	ENO2	P00925	437 aa	Known RBP	3.18	□□□□□ -1.9
SKP2	YNL311C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
SKP2	YNL311C	ERC1	P38767	581 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	CTM1	P38818	585 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	HLJ1	P48353	224 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	YGL140C	P53120	1219 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	ECM38	Q05902	660 aa	Predicted RBP	3.18	□□□□□ -1.9
SKP2	YNL311C	TSR1	Q07381	788 aa	Known RBP	3.18	□□□□□ -1.9
SKP2	YNL311C	YOL073C	Q08232	322 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	SLK19	Q08581	821 aa	Known RBP	3.18	□□□□□ -1.9
SKP2	YNL311C	RTT10	Q08924	1013 aa		3.18	□□□□□ -1.9
SKP2	YNL311C	CDC4	P07834	779 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	NAT1	P12945	854 aa	Known RBP	3.17	□□□□□ -1.9
SKP2	YNL311C	UBP13	P38187	747 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	SIP3	P38717	1229 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	YGL260W	P53056	76 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	RTS3	P53289	263 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	RRP6	Q12149	733 aa	Known RBP	3.17	□□□□□ -1.9
SKP2	YNL311C	TAF14	P35189	244 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	AKR1	P39010	764 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	KAP123	P40069	1113 aa	Known RBP	3.17	□□□□□ -1.9
SKP2	YNL311C	YIL108W	P40483	696 aa	Known RBP	3.17	□□□□□ -1.9
SKP2	YNL311C	CIS3	P47001	227 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	DAS1	P47005	663 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	YJR054W	P47114	497 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	PMT3	P47190	753 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	ARK1	P53974	638 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	GPD1	Q00055	391 aa	Known RBP	3.17	□□□□□ -1.9
SKP2	YNL311C	PUF6	Q04373	656 aa	Known RBP	3.17	□□□□□ -1.9
SKP2	YNL311C	RSB1	Q08417	382 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	YOR387C	Q08910	206 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	NBP2	Q12163	236 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	HSP42	Q12329	375 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	TRS33	Q99394	268 aa		3.17	□□□□□ -1.9
SKP2	YNL311C	SUC2	P00724	532 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	CKA2	P19454	339 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
SKP2	YNL311C	ATG15	P25641	520 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	LYP1	P32487	611 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	FRE1	P32791	686 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	TFC3	P34111	1160 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	APM3	P38153	483 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	SNF7	P39929	240 aa	Known RBP	3.16	□□□□□ -1.9
SKP2	YNL311C	AIR1	P40507	360 aa	Known RBP	3.16	□□□□□ -1.9
SKP2	YNL311C	ULP2	P40537	1034 aa	Predicted RBP	3.16	□□□□□ -1.9
SKP2	YNL311C	VHS1	Q03785	461 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	TIP41	Q12199	356 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	FRS2	P15625	503 aa	Known RBP	3.16	□□□□□ -1.9
SKP2	YNL311C	SLD2	P34252	453 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	RRP3	P38712	501 aa	Known RBP	3.16	□□□□□ -1.9
SKP2	YNL311C	CIC1	P38779	376 aa	Known RBP	3.16	□□□□□ -1.9
SKP2	YNL311C	DSE1	P40077	573 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	FTR1	P40088	404 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	PSY2	P40164	858 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	UBP7	P40453	1071 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	RSM25	P40496	264 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	SER33	P40510	469 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	YDR338C	Q05497	695 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	YPR027C	Q12079	277 aa		3.16	□□□□□ -1.9
SKP2	YNL311C	CHS1	P08004	1131 aa		3.15	□□□□□ -1.91
SKP2	YNL311C	AGP2	P38090	596 aa		3.15	□□□□□ -1.91
SKP2	YNL311C	STT3	P39007	718 aa	Known RBP	3.15	□□□□□ -1.91
SKP2	YNL311C	MGS1	P40151	587 aa		3.15	□□□□□ -1.91
SKP2	YNL311C	SMC3	P47037	1230 aa		3.15	□□□□□ -1.91
SKP2	YNL311C	NNF2	P53253	936 aa		3.15	□□□□□ -1.91
SKP2	YNL311C	MUB1	Q03162	620 aa		3.15	□□□□□ -1.91
SKP2	YNL311C	PIR3	Q03180	325 aa		3.15	□□□□□ -1.91
SKP2	YNL311C	HED1	Q03937	162 aa		3.15	□□□□□ -1.91
SKP2	YNL311C	FPR4	Q06205	392 aa	Predicted RBP	3.15	□□□□□ -1.91
SKP2	YNL311C	SPT15	P13393	240 aa	Known RBP	3.14	□□□□□ -1.91
SKP2	YNL311C	POL2	P21951	2222 aa	Known RBP	3.14	□□□□□ -1.91
SKP2	YNL311C	MIH1	P23748	554 aa		3.14	□□□□□ -1.91
SKP2	YNL311C	SEF1	P34228	1148 aa		3.14	□□□□□ -1.91
SKP2	YNL311C	ECM23	Q02710	187 aa		3.14	□□□□□ -1.91
SKP2	YNL311C	SRP1	Q02821	542 aa	Known RBP	3.14	□□□□□ -1.91
SKP2	YNL311C	TRS120	Q04183	1289 aa		3.14	□□□□□ -1.91
SKP2	YNL311C	DIC1	Q06143	298 aa		3.14	□□□□□ -1.91
SKP2	YNL311C	BSC6	Q08280	497 aa		3.14	□□□□□ -1.91
SKP2	YNL311C	SVS1	Q12254	260 aa		3.14	□□□□□ -1.91
SKP2	YNL311C	Q0182	Q9ZZW1	134 aa		3.14	□□□□□ -1.91
SKP2	YNL311C	PHO8	P11491	566 aa		3.14	□□□□□ -1.91
SKP2	YNL311C	SEC63	P14906	663 aa		3.14	□□□□□ -1.91
SKP2	YNL311C	PIH1	P38768	344 aa		3.14	□□□□□ -1.91
SKP2	YNL311C	PAC1	P39946	494 aa	Known RBP	3.14	□□□□□ -1.91
SKP2	YNL311C	MAD1	P40957	749 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms