RNA–Protein interactions for RNA: YMR013C

SEC59, Transcript of Dolichol kinase, yeast

Gene SEC59, Length 1,560 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC59	YMR013C	RRT6	P53117	311 aa	Predicted RBP	4.19	□□□□□ -1.74
SEC59	YMR013C	PEF1	P53238	335 aa		4.19	□□□□□ -1.74
SEC59	YMR013C	SQS1	P53866	767 aa	Known RBP	4.19	□□□□□ -1.74
SEC59	YMR013C	REC102	Q02721	264 aa		4.19	□□□□□ -1.74
SEC59	YMR013C	ROT1	Q03691	256 aa		4.19	□□□□□ -1.74
SEC59	YMR013C	VBA4	Q04602	768 aa	Known RBP	4.19	□□□□□ -1.74
SEC59	YMR013C	IWR1	Q07532	353 aa	Predicted RBP	4.19	□□□□□ -1.74
SEC59	YMR013C	HOS1	Q12214	470 aa		4.19	□□□□□ -1.74
SEC59	YMR013C	ENT1	Q12518	454 aa		4.19	□□□□□ -1.74
SEC59	YMR013C	ATG11	Q12527	1178 aa		4.19	□□□□□ -1.74
SEC59	YMR013C	ERG20	P08524	352 aa	Known RBP	4.18	□□□□□ -1.74
SEC59	YMR013C	HMG2	P12684	1045 aa		4.18	□□□□□ -1.74
SEC59	YMR013C	AAC3	P18238	307 aa		4.18	□□□□□ -1.74
SEC59	YMR013C	CWH43	P25618	953 aa		4.18	□□□□□ -1.74
SEC59	YMR013C	PAH1	P32567	862 aa		4.18	□□□□□ -1.74
SEC59	YMR013C	YPT7	P32939	208 aa		4.18	□□□□□ -1.74
SEC59	YMR013C	RMA1	P36001	430 aa	Known RBP	4.18	□□□□□ -1.74
SEC59	YMR013C	YBR259W	P38338	688 aa		4.18	□□□□□ -1.74
SEC59	YMR013C	YEL068C	P39977	110 aa		4.18	□□□□□ -1.74
SEC59	YMR013C	BIT61	P47041	543 aa		4.18	□□□□□ -1.74
SEC59	YMR013C	HMO1	Q03973	246 aa	Known RBP	4.18	□□□□□ -1.74
SEC59	YMR013C	PPN1	Q04119	674 aa		4.18	□□□□□ -1.74
SEC59	YMR013C	TRI1	Q05024	226 aa		4.18	□□□□□ -1.74
SEC59	YMR013C	TFC6	Q06339	672 aa		4.18	□□□□□ -1.74
SEC59	YMR013C	ECM3	Q99252	613 aa		4.18	□□□□□ -1.74
SEC59	YMR013C	RPP2A	P05319	106 aa	Known RBP	4.17	□□□□□ -1.74
SEC59	YMR013C	HIS5	P07172	385 aa		4.17	□□□□□ -1.74
SEC59	YMR013C	RNR1	P21524	888 aa	Known RBP	4.17	□□□□□ -1.74
SEC59	YMR013C	ARG1	P22768	420 aa		4.17	□□□□□ -1.74
SEC59	YMR013C	RNQ1	P25367	405 aa		4.17	□□□□□ -1.74
SEC59	YMR013C	PRE4	P30657	266 aa		4.17	□□□□□ -1.74
SEC59	YMR013C	PRM2	P40534	656 aa		4.17	□□□□□ -1.74
SEC59	YMR013C	UPF3	P48412	387 aa	Known RBP	4.17	□□□□□ -1.74
SEC59	YMR013C	CTF18	P49956	741 aa		4.17	□□□□□ -1.74
SEC59	YMR013C	SAP4	P53036	818 aa		4.17	□□□□□ -1.74
SEC59	YMR013C	NCS6	P53088	359 aa		4.17	□□□□□ -1.74
SEC59	YMR013C	ORC3	P54790	616 aa		4.17	□□□□□ -1.74
SEC59	YMR013C	ACS1	Q01574	713 aa		4.17	□□□□□ -1.74
SEC59	YMR013C	CSR1	Q06705	408 aa	Known RBP	4.17	□□□□□ -1.74
SEC59	YMR013C	SDH5	Q08230	162 aa		4.17	□□□□□ -1.74
SEC59	YMR013C	TRM8	Q12009	286 aa		4.17	□□□□□ -1.74
SEC59	YMR013C	LEU2	P04173	364 aa	Predicted RBP	4.16	□□□□□ -1.74
SEC59	YMR013C	ADE3	P07245	946 aa	Known RBP	4.16	□□□□□ -1.74
SEC59	YMR013C	RIT1	P23796	513 aa		4.16	□□□□□ -1.74
SEC59	YMR013C	ERG6	P25087	383 aa	Known RBP	4.16	□□□□□ -1.74
SEC59	YMR013C	SET3	P36124	751 aa		4.16	□□□□□ -1.74
SEC59	YMR013C	CCT3	P39077	534 aa	Known RBP	4.16	□□□□□ -1.74
SEC59	YMR013C	ECM1	P39715	212 aa		4.16	□□□□□ -1.74
SEC59	YMR013C	NOP16	P40007	231 aa	Known RBP	4.16	□□□□□ -1.74
SEC59	YMR013C	FAF1	P40546	346 aa	Predicted RBP	4.16	□□□□□ -1.74
SEC59	YMR013C	MDR1	P53258	950 aa		4.16	□□□□□ -1.74
SEC59	YMR013C	CBK1	P53894	756 aa		4.16	□□□□□ -1.74
SEC59	YMR013C	SLU7	Q02775	382 aa	Known RBP	4.16	□□□□□ -1.74
SEC59	YMR013C	AAD4	Q07747	329 aa		4.16	□□□□□ -1.74
SEC59	YMR013C	DFG16	Q99234	619 aa		4.16	□□□□□ -1.74
SEC59	YMR013C	PRP22	P24384	1145 aa	Known RBP	4.15	□□□□□ -1.74
SEC59	YMR013C	EMC1	P25574	760 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	FRD1	P32614	470 aa	Known RBP	4.15	□□□□□ -1.74
SEC59	YMR013C	UME6	P39001	836 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	YER010C	P40011	234 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	CHA4	P43634	648 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	NOP9	P47077	666 aa	Known RBP	4.15	□□□□□ -1.74
SEC59	YMR013C	TAH11	P47112	604 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	SPO1	P53541	631 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	NRG1	Q03125	231 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	IMH1	Q06704	911 aa	Known RBP	4.15	□□□□□ -1.74
SEC59	YMR013C	PEX19	Q07418	342 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	YOR352W	Q08816	343 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	GPB1	Q08886	897 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	HMI1	Q12039	706 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	YDL177C	Q12257	170 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	NPC2	Q12408	173 aa		4.15	□□□□□ -1.74
SEC59	YMR013C	RPS9B	P05755	195 aa	Known RBP	4.14	□□□□□ -1.75
SEC59	YMR013C	PCK1	P10963	549 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	BET2	P20133	325 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	RAD16	P31244	790 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	MRPL36	P36531	177 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	RPP1	P38786	293 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	ECL1	P48235	211 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	TEX1	P53851	422 aa	Known RBP	4.14	□□□□□ -1.75
SEC59	YMR013C	SPC19	Q03954	165 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	GAD1	Q04792	585 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	YCG1	Q06680	1035 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	CRD1	Q07560	283 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	POM34	Q12445	299 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	HRP1	Q99383	534 aa	Known RBP	4.14	□□□□□ -1.75
SEC59	YMR013C	CDC6	P09119	513 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	TUP1	P16649	713 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SEC59	YMR013C	KIN82	P25341	720 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	CDS1	P38221	457 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	NPR3	P38742	1146 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	GET2	P40056	285 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	GSM1	P42950	618 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	VPS62	P53285	467 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	MRPS35	P53292	345 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	SNO2	P53823	222 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	ARA2	Q04212	335 aa		4.14	□□□□□ -1.75
SEC59	YMR013C	GSF2	Q04697	403 aa	Known RBP	4.14	□□□□□ -1.75
SEC59	YMR013C	SNO4	Q04902	237 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms